RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W VPS25P47142 202 aa4.89□□□□□ -1.63
CKS1YBR135W TWF1P53250 332 aa4.89□□□□□ -1.63
CKS1YBR135W RQC1Q05468 723 aaKnown RBP4.89□□□□□ -1.63
CKS1YBR135W POS5Q06892 414 aa4.89□□□□□ -1.63
CKS1YBR135W YOL159C-AQ3E769 90 aa4.89□□□□□ -1.63
CKS1YBR135W IKI3Q06706 1349 aaKnown RBP4.89□□□□□ -1.63
CKS1YBR135W VMR1P38735 1592 aa4.88□□□□□ -1.63
CKS1YBR135W RPB8P20436 146 aa4.88□□□□□ -1.63
CKS1YBR135W ELO2P25358 347 aa4.88□□□□□ -1.63
CKS1YBR135W RPC53P25441 422 aa4.88□□□□□ -1.63
CKS1YBR135W ECM32P32644 1121 aaKnown RBP4.88□□□□□ -1.63
CKS1YBR135W SEC66P33754 206 aa4.88□□□□□ -1.63
CKS1YBR135W CMC1P36064 111 aa4.88□□□□□ -1.63
CKS1YBR135W STV1P37296 890 aa4.88□□□□□ -1.63
CKS1YBR135W MDG1P53885 366 aa4.88□□□□□ -1.63
CKS1YBR135W COQ9Q05779 260 aa4.88□□□□□ -1.63
CKS1YBR135W EDE1P34216 1381 aa4.88□□□□□ -1.63
CKS1YBR135W SNF3P10870 884 aa4.87□□□□□ -1.63
CKS1YBR135W MSR1P38714 643 aa4.87□□□□□ -1.63
CKS1YBR135W FLO5P38894 1075 aa4.87□□□□□ -1.63
CKS1YBR135W PKP2P53170 491 aa4.87□□□□□ -1.63
CKS1YBR135W CTL1Q03220 320 aaKnown RBP4.87□□□□□ -1.63
CKS1YBR135W YDL218WQ07629 317 aa4.87□□□□□ -1.63
CKS1YBR135W YLR112WQ12130 139 aa4.87□□□□□ -1.63
CKS1YBR135W YPT1P01123 206 aaKnown RBP4.86□□□□□ -1.63
CKS1YBR135W PDX1P16451 410 aa4.86□□□□□ -1.63
CKS1YBR135W YME1P32795 747 aa4.86□□□□□ -1.63
CKS1YBR135W PMT1P33775 817 aa4.86□□□□□ -1.63
CKS1YBR135W VRG4P40107 337 aa4.86□□□□□ -1.63
CKS1YBR135W HXT14P42833 540 aa4.86□□□□□ -1.63
CKS1YBR135W STB2P46679 850 aa4.86□□□□□ -1.63
CKS1YBR135W AIM22P47051 409 aa4.86□□□□□ -1.63
CKS1YBR135W YGR126WP53274 230 aa4.86□□□□□ -1.63
CKS1YBR135W SOL4P53315 255 aa4.86□□□□□ -1.63
CKS1YBR135W RPL15BP54780 204 aaPredicted RBP4.86□□□□□ -1.63
CKS1YBR135W CDC45Q08032 650 aa4.86□□□□□ -1.63
CKS1YBR135W NCE102Q12207 173 aaRIP-Chip data4.86□□□□□ -1.63not detected
CKS1YBR135W YDL007C-AQ2V2Q0 85 aa4.86□□□□□ -1.63
CKS1YBR135W PMS1P14242 873 aa4.85□□□□□ -1.63
CKS1YBR135W SUI2P20459 304 aaKnown RBP4.85□□□□□ -1.63
CKS1YBR135W AIM17P23180 465 aaKnown RBP4.85□□□□□ -1.63
CKS1YBR135W SAS3P34218 831 aa4.85□□□□□ -1.63
CKS1YBR135W YMR124WP39523 943 aaKnown RBP4.85□□□□□ -1.63
CKS1YBR135W GAT1P43574 510 aa4.85□□□□□ -1.63
CKS1YBR135W YDR131CQ03899 556 aa4.85□□□□□ -1.63
CKS1YBR135W ECI1Q05871 280 aa4.85□□□□□ -1.63
CKS1YBR135W GSH2Q08220 491 aa4.85□□□□□ -1.63
CKS1YBR135W ATX2Q12067 313 aa4.85□□□□□ -1.63
CKS1YBR135W PDR5P33302 1511 aaKnown RBP4.85□□□□□ -1.63
CKS1YBR135W GCN2P15442 1659 aa4.84□□□□□ -1.63
CKS1YBR135W PEP4P07267 405 aaKnown RBP4.84□□□□□ -1.63
CKS1YBR135W CLB3P24870 427 aa4.84□□□□□ -1.63
CKS1YBR135W BUD14P27637 709 aa4.84□□□□□ -1.63
CKS1YBR135W SCO2P38072 301 aa4.84□□□□□ -1.63
CKS1YBR135W OTU2P38747 307 aaKnown RBP4.84□□□□□ -1.63
CKS1YBR135W STP1Q00947 519 aa4.84□□□□□ -1.63
CKS1YBR135W TOF2Q02208 771 aa4.84□□□□□ -1.63
CKS1YBR135W YVH1Q02256 364 aaKnown RBP4.84□□□□□ -1.63
CKS1YBR135W IZH1Q03419 316 aa4.84□□□□□ -1.63
CKS1YBR135W PDS5Q04264 1277 aa4.84□□□□□ -1.63
CKS1YBR135W RDR1Q08904 546 aa4.84□□□□□ -1.63
CKS1YBR135W PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.84□□□□□ -1.63 RIP-Chip
CKS1YBR135W YML133CQ03099 1374 aa4.83□□□□□ -1.64
CKS1YBR135W YLL067CQ07888 1374 aa4.83□□□□□ -1.64
CKS1YBR135W YLL066CQ99208 1374 aa4.83□□□□□ -1.64
CKS1YBR135W CBP1P07252 654 aa4.83□□□□□ -1.64
CKS1YBR135W MDM10P18409 493 aa4.83□□□□□ -1.64
CKS1YBR135W PRP2P20095 876 aaPredicted RBP4.83□□□□□ -1.64
CKS1YBR135W YCP4P25349 247 aaKnown RBP4.83□□□□□ -1.64
CKS1YBR135W ROT2P38138 954 aa4.83□□□□□ -1.64
CKS1YBR135W LAG1P38703 411 aa4.83□□□□□ -1.64
CKS1YBR135W YHR210CP38893 341 aa4.83□□□□□ -1.64
CKS1YBR135W ALK1P43633 760 aaKnown RBP4.83□□□□□ -1.64
CKS1YBR135W SNG1P46950 547 aa4.83□□□□□ -1.64
CKS1YBR135W NET1P47035 1189 aa4.83□□□□□ -1.64
CKS1YBR135W CAF130P53280 1122 aaPredicted RBP4.83□□□□□ -1.64
CKS1YBR135W SMM1P53720 384 aaKnown RBP4.83□□□□□ -1.64
CKS1YBR135W RPA49Q01080 415 aaPredicted RBP4.83□□□□□ -1.64
CKS1YBR135W NUP100Q02629 959 aa4.83□□□□□ -1.64
CKS1YBR135W YOR365CQ08844 703 aa4.83□□□□□ -1.64
CKS1YBR135W HER1Q12276 1246 aa4.83□□□□□ -1.64
CKS1YBR135W YPR089WO13585 888 aa4.82□□□□□ -1.64
CKS1YBR135W PTP1P25044 335 aa4.82□□□□□ -1.64
CKS1YBR135W PAP1P29468 568 aaKnown RBP4.82□□□□□ -1.64
CKS1YBR135W YKL023WP36103 277 aaKnown RBP4.82□□□□□ -1.64
CKS1YBR135W PCL6P40038 420 aa4.82□□□□□ -1.64
CKS1YBR135W DRN1P53255 507 aaKnown RBP4.82□□□□□ -1.64
CKS1YBR135W DUG3P53871 357 aa4.82□□□□□ -1.64
CKS1YBR135W YNL181WP53878 407 aa4.82□□□□□ -1.64
CKS1YBR135W EKI1Q03764 534 aa4.82□□□□□ -1.64
CKS1YBR135W YMR160WQ03823 816 aa4.82□□□□□ -1.64
CKS1YBR135W TAP42Q04372 366 aa4.82□□□□□ -1.64
CKS1YBR135W RBS1Q05672 457 aaKnown RBP4.82□□□□□ -1.64
CKS1YBR135W RPL31BP0C2H9 113 aaKnown RBP4.81□□□□□ -1.64
CKS1YBR135W GID7P25569 745 aa4.81□□□□□ -1.64
CKS1YBR135W ADK2P26364 225 aa4.81□□□□□ -1.64
CKS1YBR135W SNC1P31109 117 aa4.81□□□□□ -1.64
CKS1YBR135W VMA8P32610 256 aaKnown RBP4.81□□□□□ -1.64
CKS1YBR135W SHP1P34223 423 aa4.81□□□□□ -1.64
CKS1YBR135W YPK3P38070 525 aa4.81□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms