RNA–Protein interactions for RNA: YBR048W

RPS11B, Transcript of Protein component of the small (40S) ribosomal subunit, yeastyeast

Gene RPS11B, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPS11BYBR048W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
RPS11BYBR048W YOR365CQ08844 703 aa3.79□□□□□ -1.8
RPS11BYBR048W APL5Q08951 932 aaKnown RBP3.79□□□□□ -1.8
RPS11BYBR048W HSP42Q12329 375 aa3.79□□□□□ -1.8
RPS11BYBR048W YLR111WQ12528 110 aa3.79□□□□□ -1.8
RPS11BYBR048W YML133CQ03099 1374 aa3.78□□□□□ -1.8
RPS11BYBR048W YLL067CQ07888 1374 aa3.78□□□□□ -1.8
RPS11BYBR048W YLL066CQ99208 1374 aa3.78□□□□□ -1.8
RPS11BYBR048W YER145C-AA0A023PYF4 145 aa3.78□□□□□ -1.8
RPS11BYBR048W SPO11P23179 398 aa3.78□□□□□ -1.8
RPS11BYBR048W PHO90P39535 881 aa3.78□□□□□ -1.8
RPS11BYBR048W EFM4P40516 257 aa3.78□□□□□ -1.8
RPS11BYBR048W YGR149WP48236 432 aa3.78□□□□□ -1.8
RPS11BYBR048W BPL1P48445 690 aaPredicted RBP3.78□□□□□ -1.8
RPS11BYBR048W UBP8P50102 471 aa3.78□□□□□ -1.8
RPS11BYBR048W HEF3P53978 1044 aaKnown RBP3.78□□□□□ -1.8
RPS11BYBR048W YPL107WQ02873 248 aa3.78□□□□□ -1.8
RPS11BYBR048W PRP42Q03776 544 aaKnown RBP3.78□□□□□ -1.8
RPS11BYBR048W CAC2Q04199 468 aa3.78□□□□□ -1.8
RPS11BYBR048W ARP10Q04549 284 aa3.78□□□□□ -1.8
RPS11BYBR048W CUE5Q08412 411 aaKnown RBP3.78□□□□□ -1.8
RPS11BYBR048W DCI1Q08558 271 aa3.78□□□□□ -1.8
RPS11BYBR048W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
RPS11BYBR048W FRE6Q12473 712 aa3.78□□□□□ -1.8
RPS11BYBR048W RIP1P08067 215 aa3.77□□□□□ -1.81
RPS11BYBR048W NUP1P20676 1076 aa3.77□□□□□ -1.81
RPS11BYBR048W CNA1P23287 553 aa3.77□□□□□ -1.81
RPS11BYBR048W ADY2P25613 283 aa3.77□□□□□ -1.81
RPS11BYBR048W POT1P27796 417 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
RPS11BYBR048W YIM1P28625 365 aa3.77□□□□□ -1.81
RPS11BYBR048W YKL023WP36103 277 aaKnown RBP3.77□□□□□ -1.81
RPS11BYBR048W LAS1P36146 502 aaPredicted RBP3.77□□□□□ -1.81
RPS11BYBR048W DUG2P38149 878 aa3.77□□□□□ -1.81
RPS11BYBR048W IRC7P43623 340 aa3.77□□□□□ -1.81
RPS11BYBR048W ECM27P47144 725 aa3.77□□□□□ -1.81
RPS11BYBR048W OCA1P50946 238 aaPredicted RBP3.77□□□□□ -1.81
RPS11BYBR048W MLC1P53141 149 aa3.77□□□□□ -1.81
RPS11BYBR048W SNU56Q03782 492 aaKnown RBP3.77□□□□□ -1.81
RPS11BYBR048W HEL2Q05580 639 aaKnown RBP3.77□□□□□ -1.81
RPS11BYBR048W TPO3Q06451 622 aa3.77□□□□□ -1.81
RPS11BYBR048W RKM1Q08961 583 aaPredicted RBP3.77□□□□□ -1.81
RPS11BYBR048W NFI1Q12216 726 aa3.77□□□□□ -1.81
RPS11BYBR048W CYB2P00175 591 aa3.76□□□□□ -1.81
RPS11BYBR048W COR1P07256 457 aa3.76□□□□□ -1.81
RPS11BYBR048W PEP5P12868 1029 aa3.76□□□□□ -1.81
RPS11BYBR048W SPO7P18410 259 aa3.76□□□□□ -1.81
RPS11BYBR048W CLN1P20437 546 aa3.76□□□□□ -1.81
RPS11BYBR048W SGV1P23293 657 aaKnown RBP3.76□□□□□ -1.81
RPS11BYBR048W KRE2P27809 442 aa3.76□□□□□ -1.81
RPS11BYBR048W BRF1P29056 596 aa3.76□□□□□ -1.81
RPS11BYBR048W AFG1P32317 509 aa3.76□□□□□ -1.81
RPS11BYBR048W TCM62P38228 572 aaKnown RBP3.76□□□□□ -1.81
RPS11BYBR048W LAG1P38703 411 aa3.76□□□□□ -1.81
RPS11BYBR048W TIF4631P39935 952 aaKnown RBP3.76□□□□□ -1.81
RPS11BYBR048W YMR147WP40218 223 aaKnown RBP3.76□□□□□ -1.81
RPS11BYBR048W YJL132WP47014 750 aa3.76□□□□□ -1.81
RPS11BYBR048W YJR154WP47181 346 aa3.76□□□□□ -1.81
RPS11BYBR048W RMD9P53140 646 aaKnown RBP3.76□□□□□ -1.81
RPS11BYBR048W SIL1Q08199 421 aa3.76□□□□□ -1.81
RPS11BYBR048W THP1Q08231 455 aa3.76□□□□□ -1.81
RPS11BYBR048W KEL3Q08979 651 aaPredicted RBP3.76□□□□□ -1.81
RPS11BYBR048W VPS54Q12071 889 aa3.76□□□□□ -1.81
RPS11BYBR048W AEP3Q12089 606 aa3.76□□□□□ -1.81
RPS11BYBR048W SUC2P00724 532 aa3.75□□□□□ -1.81
RPS11BYBR048W RPL6BP05739 176 aaKnown RBP3.75□□□□□ -1.81
RPS11BYBR048W YML002WP0CF17 737 aa3.75□□□□□ -1.81
RPS11BYBR048W SNF3P10870 884 aa3.75□□□□□ -1.81
RPS11BYBR048W MCM4P30665 933 aaKnown RBP3.75□□□□□ -1.81
RPS11BYBR048W SNC1P31109 117 aa3.75□□□□□ -1.81
RPS11BYBR048W HIR2P32480 875 aa3.75□□□□□ -1.81
RPS11BYBR048W HOT13P36078 116 aa3.75□□□□□ -1.81
RPS11BYBR048W ARA1P38115 344 aa3.75□□□□□ -1.81
RPS11BYBR048W LEU5P38702 357 aa3.75□□□□□ -1.81
RPS11BYBR048W SER3P40054 469 aa3.75□□□□□ -1.81
RPS11BYBR048W HXT9P40885 567 aa3.75□□□□□ -1.81
RPS11BYBR048W TFG2P41896 400 aaPredicted RBP3.75□□□□□ -1.81
RPS11BYBR048W SNG1P46950 547 aa3.75□□□□□ -1.81
RPS11BYBR048W DRN1P53255 507 aaKnown RBP3.75□□□□□ -1.81
RPS11BYBR048W TOF1P53840 1238 aa3.75□□□□□ -1.81
RPS11BYBR048W RPL6AQ02326 176 aaKnown RBP3.75□□□□□ -1.81
RPS11BYBR048W SMA1Q02651 245 aa3.75□□□□□ -1.81
RPS11BYBR048W VTC3Q02725 835 aa3.75□□□□□ -1.81
RPS11BYBR048W FMP30Q02883 468 aa3.75□□□□□ -1.81
RPS11BYBR048W YMR130WQ04223 302 aa3.75□□□□□ -1.81
RPS11BYBR048W CFT2Q12102 859 aaPredicted RBP3.75□□□□□ -1.81
RPS11BYBR048W VAM3Q12241 283 aa3.75□□□□□ -1.81
RPS11BYBR048W RRD2Q12461 358 aa3.75□□□□□ -1.81
RPS11BYBR048W SKI3P17883 1432 aaKnown RBP3.75□□□□□ -1.81
RPS11BYBR048W LPD1P09624 499 aaKnown RBP3.74□□□□□ -1.81
RPS11BYBR048W SEC63P14906 663 aa3.74□□□□□ -1.81
RPS11BYBR048W SRV2P17555 526 aaKnown RBP3.74□□□□□ -1.81
RPS11BYBR048W URA4P20051 364 aa3.74□□□□□ -1.81
RPS11BYBR048W MSP1P28737 362 aa3.74□□□□□ -1.81
RPS11BYBR048W NIP1P32497 812 aaKnown RBP3.74□□□□□ -1.81
RPS11BYBR048W YEL043WP32618 956 aa3.74□□□□□ -1.81
RPS11BYBR048W BNA4P38169 460 aa3.74□□□□□ -1.81
RPS11BYBR048W RFC3P38629 340 aa3.74□□□□□ -1.81
RPS11BYBR048W RRF1P38771 230 aa3.74□□□□□ -1.81
RPS11BYBR048W TOM71P38825 639 aaKnown RBP3.74□□□□□ -1.81
RPS11BYBR048W VHS2P40463 436 aa3.74□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms