RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, human

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFCAB11-208	ENST00000555872	PPFIBP1	Q86W92	1011 aa		11.43	□□□□□ -0.58
EFCAB11-208	ENST00000555872	CCDC13	Q8IYE1	715 aa		11.43	□□□□□ -0.58
EFCAB11-208	ENST00000555872	RNF168	Q8IYW5	571 aa	Predicted RBP	11.43	□□□□□ -0.58
EFCAB11-208	ENST00000555872	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.43	□□□□□ -0.58
EFCAB11-208	ENST00000555872	OSBPL9	Q96SU4	736 aa		11.43	□□□□□ -0.58
EFCAB11-208	ENST00000555872	POLD4	Q9HCU8	107 aa		11.43	□□□□□ -0.58
EFCAB11-208	ENST00000555872	PAPOLB	Q9NRJ5	636 aa	Known RBP	11.43	□□□□□ -0.58
EFCAB11-208	ENST00000555872	GJB4	Q9NTQ9	266 aa		11.43	□□□□□ -0.58
EFCAB11-208	ENST00000555872	TLR7	Q9NYK1	1049 aa	Known RBP	11.43	□□□□□ -0.58
EFCAB11-208	ENST00000555872	TEX33	O43247	280 aa		11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	RASSF9	O75901	435 aa		11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	CYP1A2	P05177	515 aa		11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	FDPS	P14324	419 aa	Known RBP	11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	AMPD2	Q01433	879 aa		11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	ITIH3	Q06033	890 aa		11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	FMR1	Q06787	632 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	EIF2B5	Q13144	721 aa	Known RBP	11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	RABL6	Q3YEC7	729 aa	Predicted RBP	11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	MIS18BP1	Q6P0N0	1132 aa		11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	WDR75	Q8IWA0	830 aa	Known RBP	11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	CENPT	Q96BT3	561 aa		11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	EAF2	Q96CJ1	260 aa	Predicted RBP	11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	NGLY1	Q96IV0	654 aa		11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	MMS19	Q96T76	1030 aa		11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	VCPKMT	Q9H867	229 aa		11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	SLC40A1	Q9NP59	571 aa		11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	SAMSN1	Q9NSI8	373 aa	Known RBP	11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	SSX2IP	Q9Y2D8	614 aa		11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	SIPA1L3	O60292	1781 aa	Predicted RBP	11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	ATXN2	Q99700	1313 aa	Known RBP	11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	CHGB	P05060	677 aa		11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	MSL3P1	P0C860	447 aa		11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	EZR	P15311	586 aa	Known RBP	11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	ATP1A2	P50993	1020 aa		11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	WASHC5	Q12768	1159 aa		11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	ANO1	Q5XXA6	986 aa		11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	STOX1	Q6ZVD7	989 aa		11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	RETREG2	Q8NC44	543 aa		11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	CAPZA3	Q96KX2	299 aa		11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	DHX36	Q9H2U1	1008 aa	Known RBP	11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	C6orf203	Q9P0P8	240 aa	Predicted RBP	11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	TTF2	Q9UNY4	1162 aa	Known RBP	11.42	□□□□□ -0.58
EFCAB11-208	ENST00000555872	KDM3B	Q7LBC6	1761 aa		11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	SALL1	Q9NSC2	1324 aa		11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	SRGAP2	O75044	1071 aa		11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	B3GALNT1	O75752	331 aa		11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	ZNF18	P17022	549 aa		11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	NR1I3	Q14994	352 aa		11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	SNCB	Q16143	134 aa		11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	CHST3	Q7LGC8	479 aa		11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	METTL16	Q86W50	562 aa	Known RBP	11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	JAKMIP2	Q96AA8	810 aa		11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	NAA15	Q9BXJ9	866 aa	Known RBP	11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	CROT	Q9UKG9	612 aa		11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	BZW2	Q9Y6E2	419 aa	Known RBP	11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	COL15A1	P39059	1388 aa		11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	CEMIP	Q8WUJ3	1361 aa		11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	SCN11A	Q9UI33	1791 aa		11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	GOLGA6L10	A6NI86	522 aa		11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	FOXN1	O15353	648 aa		11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	PPP1R12B	O60237	982 aa	Predicted RBP	11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	HAL	P42357	657 aa		11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	ENOX2	Q16206	610 aa	Known RBP	11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	ZNF827	Q17R98	1081 aa		11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	EMC10	Q5UCC4	262 aa		11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	CCNI2	Q6ZMN8	369 aa	Predicted RBP	11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	DHX32	Q7L7V1	743 aa	Known RBP	11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	SPATS2	Q86XZ4	545 aa	Known RBP	11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	CABLES1	Q8TDN4	633 aa		11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	C8orf76	Q96K31	380 aa		11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	TCHP	Q9BT92	498 aa		11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	PAGR1	Q9BTK6	254 aa		11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	C2orf49	Q9BVC5	232 aa	Predicted RBP	11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
EFCAB11-208	ENST00000555872	MTA2	O94776	668 aa		11.4	□□□□□ -0.58
EFCAB11-208	ENST00000555872	GBP2	P32456	591 aa	Predicted RBP	11.4	□□□□□ -0.58
EFCAB11-208	ENST00000555872	CLK1	P49759	484 aa	Known RBP	11.4	□□□□□ -0.58
EFCAB11-208	ENST00000555872	TEF	Q10587	303 aa		11.4	□□□□□ -0.58
EFCAB11-208	ENST00000555872	ARHGEF6	Q15052	776 aa		11.4	□□□□□ -0.58
EFCAB11-208	ENST00000555872	LLGL2	Q6P1M3	1020 aa		11.4	□□□□□ -0.58
EFCAB11-208	ENST00000555872	SND1	Q7KZF4	910 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
EFCAB11-208	ENST00000555872	LMNTD2	Q8IXW0	634 aa		11.4	□□□□□ -0.58
EFCAB11-208	ENST00000555872	MAK16	Q9BXY0	300 aa	Known RBP	11.4	□□□□□ -0.58
EFCAB11-208	ENST00000555872	BATF3	Q9NR55	127 aa		11.4	□□□□□ -0.58
EFCAB11-208	ENST00000555872	COL5A2	P05997	1499 aa	Predicted RBP	11.4	□□□□□ -0.58
EFCAB11-208	ENST00000555872	GOLGA8K	D6RF30	607 aa		11.4	□□□□□ -0.58
EFCAB11-208	ENST00000555872	ATP9B	O43861	1147 aa		11.4	□□□□□ -0.58
EFCAB11-208	ENST00000555872	EIF2S2	P20042	333 aa	Known RBP	11.4	□□□□□ -0.58
EFCAB11-208	ENST00000555872	PDIA3	P30101	505 aa	Known RBP	11.4	□□□□□ -0.58
EFCAB11-208	ENST00000555872	CASP14	P31944	242 aa		11.4	□□□□□ -0.58
EFCAB11-208	ENST00000555872	GPR162	Q16538	588 aa		11.4	□□□□□ -0.58
EFCAB11-208	ENST00000555872	AKAP4	Q5JQC9	854 aa		11.4	□□□□□ -0.58
EFCAB11-208	ENST00000555872	SHC4	Q6S5L8	630 aa		11.4	□□□□□ -0.58
EFCAB11-208	ENST00000555872	FAM228A	Q86W67	206 aa		11.4	□□□□□ -0.58
EFCAB11-208	ENST00000555872	ARL8A	Q96BM9	186 aa		11.4	□□□□□ -0.58
EFCAB11-208	ENST00000555872	RRP36	Q96EU6	259 aa	Known RBP	11.4	□□□□□ -0.58
EFCAB11-208	ENST00000555872	TAOK3	Q9H2K8	898 aa		11.4	□□□□□ -0.58
EFCAB11-208	ENST00000555872	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms