RNA–Protein interactions for RNA: ENST00000491282.5

SOX2-OT-212, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 882 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-212ENST00000491282 TBC1D5Q92609 795 aa13.33□□□□□ -0.28
SOX2-OT-212ENST00000491282 LRRC2Q9BYS8 371 aa13.33□□□□□ -0.28
SOX2-OT-212ENST00000491282 KATNBL1Q9H079 304 aa13.33□□□□□ -0.28
SOX2-OT-212ENST00000491282 ABHD16BQ9H3Z7 469 aa13.33□□□□□ -0.28
SOX2-OT-212ENST00000491282 PCDH10Q9P2E7 1040 aa13.33□□□□□ -0.28
SOX2-OT-212ENST00000491282 PNMA2Q9UL42 364 aa13.33□□□□□ -0.28
SOX2-OT-212ENST00000491282 ZMYND8Q9ULU4 1186 aaPredicted RBP13.33□□□□□ -0.28
SOX2-OT-212ENST00000491282 COLQQ9Y215 455 aaPredicted RBP13.33□□□□□ -0.28
SOX2-OT-212ENST00000491282 ADCY6O43306 1168 aa13.32□□□□□ -0.28
SOX2-OT-212ENST00000491282 SYN1P17600 705 aa13.32□□□□□ -0.28
SOX2-OT-212ENST00000491282 MCM5P33992 734 aa13.32□□□□□ -0.28
SOX2-OT-212ENST00000491282 RPS6P62753 249 aaKnown RBP13.32□□□□□ -0.28
SOX2-OT-212ENST00000491282 IRX5P78411 483 aaPredicted RBP13.32□□□□□ -0.28
SOX2-OT-212ENST00000491282 TROAPQ12815 778 aa13.32□□□□□ -0.28
SOX2-OT-212ENST00000491282 CATIPQ7Z7H3 387 aa13.32□□□□□ -0.28
SOX2-OT-212ENST00000491282 FBXO11Q86XK2 927 aa13.32□□□□□ -0.28
SOX2-OT-212ENST00000491282 EFCAB3Q8N7B9 438 aa13.32□□□□□ -0.28
SOX2-OT-212ENST00000491282 NUP133Q8WUM0 1156 aa13.32□□□□□ -0.28
SOX2-OT-212ENST00000491282 MYL10Q9BUA6 226 aa13.32□□□□□ -0.28
SOX2-OT-212ENST00000491282 LY9Q9HBG7 655 aa13.32□□□□□ -0.28
SOX2-OT-212ENST00000491282 PDGFCQ9NRA1 345 aa13.32□□□□□ -0.28
SOX2-OT-212ENST00000491282 SMCHD1A6NHR9 2005 aa13.32□□□□□ -0.28
SOX2-OT-212ENST00000491282 PLXNA1Q9UIW2 1896 aa13.31□□□□□ -0.28
SOX2-OT-212ENST00000491282 MYADML2A6NDP7 307 aa13.31□□□□□ -0.28
SOX2-OT-212ENST00000491282 SH2B2O14492 632 aaPredicted RBP13.31□□□□□ -0.28
SOX2-OT-212ENST00000491282 ADAMTS4O75173 837 aa13.31□□□□□ -0.28
SOX2-OT-212ENST00000491282 PTGS1P23219 599 aa13.31□□□□□ -0.28
SOX2-OT-212ENST00000491282 TMEM63BQ5T3F8 832 aa13.31□□□□□ -0.28
SOX2-OT-212ENST00000491282 RNF20Q5VTR2 975 aa13.31□□□□□ -0.28
SOX2-OT-212ENST00000491282 NFXL1Q6ZNB6 911 aa13.31□□□□□ -0.28
SOX2-OT-212ENST00000491282 NOL8Q76FK4 1167 aaKnown RBP13.31□□□□□ -0.28
SOX2-OT-212ENST00000491282 RNF180Q86T96 592 aa13.31□□□□□ -0.28
SOX2-OT-212ENST00000491282 HOMER1Q86YM7 354 aa13.31□□□□□ -0.28
SOX2-OT-212ENST00000491282 RAB11FIP4Q86YS3 637 aa13.31□□□□□ -0.28
SOX2-OT-212ENST00000491282 FBXO16Q8IX29 292 aaPredicted RBP13.31□□□□□ -0.28
SOX2-OT-212ENST00000491282 ZNF654Q8IZM8 581 aa13.31□□□□□ -0.28
SOX2-OT-212ENST00000491282 PIBF1Q8WXW3 757 aa13.31□□□□□ -0.28
SOX2-OT-212ENST00000491282 PIGSQ96S52 555 aa13.31□□□□□ -0.28
SOX2-OT-212ENST00000491282 ADD3Q9UEY8 706 aaKnown RBP13.31□□□□□ -0.28
SOX2-OT-212ENST00000491282 ABCB11O95342 1321 aa13.31□□□□□ -0.28
SOX2-OT-212ENST00000491282 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.3□□□□□ -0.28
SOX2-OT-212ENST00000491282 CYTH3O43739 400 aa13.3□□□□□ -0.28
SOX2-OT-212ENST00000491282 PPP1R11O60927 126 aaPredicted RBP13.3□□□□□ -0.28
SOX2-OT-212ENST00000491282 DUSP11O75319 330 aaKnown RBP13.3□□□□□ -0.28
SOX2-OT-212ENST00000491282 ALDH5A1P51649 535 aaPredicted RBP13.3□□□□□ -0.28
SOX2-OT-212ENST00000491282 MTMR8Q96EF0 704 aa13.3□□□□□ -0.28
SOX2-OT-212ENST00000491282 TMEM87BQ96K49 555 aa13.3□□□□□ -0.28
SOX2-OT-212ENST00000491282 TCEANC2Q96MN5 208 aa13.3□□□□□ -0.28
SOX2-OT-212ENST00000491282 NEK1Q96PY6 1258 aa13.3□□□□□ -0.28
SOX2-OT-212ENST00000491282 AMNQ9BXJ7 453 aa13.3□□□□□ -0.28
SOX2-OT-212ENST00000491282 PHF24Q9UPV7 400 aa13.3□□□□□ -0.28
SOX2-OT-212ENST00000491282 MRPL11Q9Y3B7 192 aaKnown RBP13.3□□□□□ -0.28
SOX2-OT-212ENST00000491282 SYNRGQ9UMZ2 1314 aa13.3□□□□□ -0.28
SOX2-OT-212ENST00000491282 CCDC69A6NI79 296 aa13.29□□□□□ -0.28
SOX2-OT-212ENST00000491282 ZBTB5O15062 677 aa13.29□□□□□ -0.28
SOX2-OT-212ENST00000491282 C6orf222P0C671 652 aaPredicted RBP13.29□□□□□ -0.28
SOX2-OT-212ENST00000491282 SMPD1P17405 629 aa13.29□□□□□ -0.28
SOX2-OT-212ENST00000491282 RXRAP19793 462 aa13.29□□□□□ -0.28
SOX2-OT-212ENST00000491282 RTP1P59025 263 aa13.29□□□□□ -0.28
SOX2-OT-212ENST00000491282 TNFAIP2Q03169 654 aa13.29□□□□□ -0.28
SOX2-OT-212ENST00000491282 ADCK5Q3MIX3 580 aa13.29□□□□□ -0.28
SOX2-OT-212ENST00000491282 TPRNQ4KMQ1 711 aa13.29□□□□□ -0.28
SOX2-OT-212ENST00000491282 TAPT1Q6NXT6 567 aa13.29□□□□□ -0.28
SOX2-OT-212ENST00000491282 SLC39A5Q6ZMH5 540 aa13.29□□□□□ -0.28
SOX2-OT-212ENST00000491282 RGS22Q8NE09 1264 aa13.29□□□□□ -0.28
SOX2-OT-212ENST00000491282 KLHDC9Q8NEP7 349 aa13.29□□□□□ -0.28
SOX2-OT-212ENST00000491282 SYTL5Q8TDW5 730 aaPredicted RBP13.29□□□□□ -0.28
SOX2-OT-212ENST00000491282 MORC4Q8TE76 937 aa13.29□□□□□ -0.28
SOX2-OT-212ENST00000491282 TAAR1Q96RJ0 339 aa13.29□□□□□ -0.28
SOX2-OT-212ENST00000491282 RIOX1Q9H6W3 641 aa13.29□□□□□ -0.28
SOX2-OT-212ENST00000491282 COL20A1Q9P218 1284 aa13.29□□□□□ -0.28
SOX2-OT-212ENST00000491282 ATP11BQ9Y2G3 1177 aa13.29□□□□□ -0.28
SOX2-OT-212ENST00000491282 PCDHA1Q9Y5I3 950 aa13.29□□□□□ -0.28
SOX2-OT-212ENST00000491282 DDAH1O94760 285 aa13.28□□□□□ -0.28
SOX2-OT-212ENST00000491282 LIFRP42702 1097 aa13.28□□□□□ -0.28
SOX2-OT-212ENST00000491282 ACLYP53396 1101 aa13.28□□□□□ -0.28
SOX2-OT-212ENST00000491282 EXOSC10Q01780 885 aaKnown RBP13.28□□□□□ -0.28
SOX2-OT-212ENST00000491282 PDE4DQ08499 809 aa13.28□□□□□ -0.28
SOX2-OT-212ENST00000491282 KCNA10Q16322 511 aa13.28□□□□□ -0.28
SOX2-OT-212ENST00000491282 HABP4Q5JVS0 413 aaKnown RBP13.28□□□□□ -0.28
SOX2-OT-212ENST00000491282 IQSEC1Q6DN90 963 aa13.28□□□□□ -0.28
SOX2-OT-212ENST00000491282 CCSAPQ6IQ19 270 aaPredicted RBP13.28□□□□□ -0.28
SOX2-OT-212ENST00000491282 MCF2L2Q86YR7 1114 aa13.28□□□□□ -0.28
SOX2-OT-212ENST00000491282 TMTC2Q8N394 836 aa13.28□□□□□ -0.28
SOX2-OT-212ENST00000491282 CTCFLQ8NI51 663 aaPredicted RBP13.28□□□□□ -0.28
SOX2-OT-212ENST00000491282 MTA3Q9BTC8 594 aa13.28□□□□□ -0.28
SOX2-OT-212ENST00000491282 VTA1Q9NP79 307 aa13.28□□□□□ -0.28
SOX2-OT-212ENST00000491282 CEP290O15078 2479 aa13.28□□□□□ -0.28
SOX2-OT-212ENST00000491282 A0A1W2PQ45 241 aaPredicted RBP13.27□□□□□ -0.29
SOX2-OT-212ENST00000491282 A0A1W2PQY0 241 aa13.27□□□□□ -0.29
SOX2-OT-212ENST00000491282 OPLAHO14841 1288 aa13.27□□□□□ -0.29
SOX2-OT-212ENST00000491282 CTAGE5O15320 804 aa13.27□□□□□ -0.29
SOX2-OT-212ENST00000491282 DYNC1LI2O43237 492 aaPredicted RBP13.27□□□□□ -0.29
SOX2-OT-212ENST00000491282 PLEKHA8P1O95397 391 aa13.27□□□□□ -0.29
SOX2-OT-212ENST00000491282 CFBP00751 764 aa13.27□□□□□ -0.29
SOX2-OT-212ENST00000491282 CPA1P15085 419 aa13.27□□□□□ -0.29
SOX2-OT-212ENST00000491282 GJA9P57773 515 aa13.27□□□□□ -0.29
SOX2-OT-212ENST00000491282 BEX3Q00994 111 aa13.27□□□□□ -0.29
SOX2-OT-212ENST00000491282 TSGA10IPQ3SY00 556 aa13.27□□□□□ -0.29
SOX2-OT-212ENST00000491282 TRIM60Q495X7 471 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms