RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 MAP2K1Q02750 393 aaPredicted RBP18.18■□□□□ 0.5
APOE-205ENST00000485628 PLS1Q14651 629 aa18.18■□□□□ 0.5
APOE-205ENST00000485628 MCF2L2Q86YR7 1114 aa18.18■□□□□ 0.5
APOE-205ENST00000485628 CRYGNQ8WXF5 182 aa18.18■□□□□ 0.5
APOE-205ENST00000485628 CUL5Q93034 780 aa18.18■□□□□ 0.5
APOE-205ENST00000485628 CYP39A1Q9NYL5 469 aa18.18■□□□□ 0.5
APOE-205ENST00000485628 COL20A1Q9P218 1284 aa18.18■□□□□ 0.5
APOE-205ENST00000485628 PCDHA6Q9UN73 950 aa18.18■□□□□ 0.5
APOE-205ENST00000485628 PCDHA8Q9Y5H6 950 aa18.18■□□□□ 0.5
APOE-205ENST00000485628 KIF28PB7ZC32 967 aa18.17■□□□□ 0.5
APOE-205ENST00000485628 STRNO43815 780 aa18.17■□□□□ 0.5
APOE-205ENST00000485628 MAPK4P31152 587 aa18.17■□□□□ 0.5
APOE-205ENST00000485628 RPS6P62753 249 aaKnown RBP18.17■□□□□ 0.5
APOE-205ENST00000485628 CAP1Q01518 475 aa18.17■□□□□ 0.5
APOE-205ENST00000485628 GUCY1B3Q02153 619 aa18.17■□□□□ 0.5
APOE-205ENST00000485628 USP17L6PQ6QN14 398 aa18.17■□□□□ 0.5
APOE-205ENST00000485628 DIS3L2Q8IYB7 885 aaKnown RBP18.17■□□□□ 0.5
APOE-205ENST00000485628 SYTL5Q8TDW5 730 aaPredicted RBP18.17■□□□□ 0.5
APOE-205ENST00000485628 USP6NLQ92738 828 aa18.17■□□□□ 0.5
APOE-205ENST00000485628 FRMPD4Q14CM0 1322 aa18.17■□□□□ 0.5
APOE-205ENST00000485628 GCOM1H8Y6P7 765 aaPredicted RBP18.16■□□□□ 0.5
APOE-205ENST00000485628 POLR2MP0CAP2 368 aa18.16■□□□□ 0.5
APOE-205ENST00000485628 RESTQ13127 1097 aa18.16■□□□□ 0.5
APOE-205ENST00000485628 NR5A1Q13285 461 aa18.16■□□□□ 0.5
APOE-205ENST00000485628 TRIM29Q14134 588 aa18.16■□□□□ 0.5
APOE-205ENST00000485628 EARS2Q5JPH6 523 aaKnown RBP18.16■□□□□ 0.5
APOE-205ENST00000485628 GPR142Q7Z601 462 aa18.16■□□□□ 0.5
APOE-205ENST00000485628 NCAPG2Q86XI2 1143 aa18.16■□□□□ 0.5
APOE-205ENST00000485628 BICD2Q8TD16 824 aa18.16■□□□□ 0.5
APOE-205ENST00000485628 FGD4Q96M96 766 aa18.16■□□□□ 0.5
APOE-205ENST00000485628 HOMER2Q9NSB8 354 aa18.16■□□□□ 0.5
APOE-205ENST00000485628 PFASO15067 1338 aa18.16■□□□□ 0.5
APOE-205ENST00000485628 RPTORQ8N122 1335 aa18.16■□□□□ 0.5
APOE-205ENST00000485628 IGHA2P01877 340 aa18.15■□□□□ 0.5
APOE-205ENST00000485628 ZSCAN22P10073 491 aaPredicted RBP18.15■□□□□ 0.5
APOE-205ENST00000485628 PTPREP23469 700 aa18.15■□□□□ 0.5
APOE-205ENST00000485628 KRT2P35908 639 aa18.15■□□□□ 0.5
APOE-205ENST00000485628 FOSBP53539 338 aa18.15■□□□□ 0.5
APOE-205ENST00000485628 LACTBP83111 547 aaPredicted RBP18.15■□□□□ 0.5
APOE-205ENST00000485628 AP3B2Q13367 1082 aa18.15■□□□□ 0.5
APOE-205ENST00000485628 BAATQ14032 418 aaPredicted RBP18.15■□□□□ 0.5
APOE-205ENST00000485628 GRB14Q14449 540 aa18.15■□□□□ 0.5
APOE-205ENST00000485628 UBE2SQ16763 222 aa18.15■□□□□ 0.5
APOE-205ENST00000485628 MORN1Q5T089 497 aa18.15■□□□□ 0.5
APOE-205ENST00000485628 MCTP2Q6DN12 878 aa18.15■□□□□ 0.5
APOE-205ENST00000485628 RNF207Q6ZRF8 634 aa18.15■□□□□ 0.5
APOE-205ENST00000485628 FAM133AQ8N9E0 248 aa18.15■□□□□ 0.5
APOE-205ENST00000485628 DAXXQ9UER7 740 aaPredicted RBP18.15■□□□□ 0.5
APOE-205ENST00000485628 GJD2Q9UKL4 321 aa18.15■□□□□ 0.5
APOE-205ENST00000485628 ASTN1O14525 1302 aa18.15■□□□□ 0.5
APOE-205ENST00000485628 MYH7BA7E2Y1 1941 aa18.14■□□□□ 0.49
APOE-205ENST00000485628 H3BQV1 296 aa18.14■□□□□ 0.49
APOE-205ENST00000485628 GPR25O00155 361 aa18.14■□□□□ 0.49
APOE-205ENST00000485628 CFBP00751 764 aa18.14■□□□□ 0.49
APOE-205ENST00000485628 FOSP01100 380 aaPredicted RBP18.14■□□□□ 0.49
APOE-205ENST00000485628 IFFO2Q5TF58 517 aa18.14■□□□□ 0.49
APOE-205ENST00000485628 SLC30A10Q6XR72 485 aa18.14■□□□□ 0.49
APOE-205ENST00000485628 PLEKHH3Q7Z736 793 aa18.14■□□□□ 0.49
APOE-205ENST00000485628 REXO1Q8N1G1 1221 aaKnown RBP18.14■□□□□ 0.49
APOE-205ENST00000485628 RASGRP4Q8TDF6 673 aa18.14■□□□□ 0.49
APOE-205ENST00000485628 TMEM260Q9NX78 707 aa18.14■□□□□ 0.49
APOE-205ENST00000485628 BIN2Q9UBW5 565 aaPredicted RBP18.14■□□□□ 0.49
APOE-205ENST00000485628 ZSWIM8A7E2V4 1837 aa18.14■□□□□ 0.49
APOE-205ENST00000485628 SLC15A5A6NIM6 579 aa18.13■□□□□ 0.49
APOE-205ENST00000485628 COBLO75128 1261 aa18.13■□□□□ 0.49
APOE-205ENST00000485628 FCER1AP12319 257 aa18.13■□□□□ 0.49
APOE-205ENST00000485628 HOXA13P31271 388 aaPredicted RBP18.13■□□□□ 0.49
APOE-205ENST00000485628 NUCB2P80303 420 aa18.13■□□□□ 0.49
APOE-205ENST00000485628 SP3Q02447 781 aa18.13■□□□□ 0.49
APOE-205ENST00000485628 ZNF792Q3KQV3 632 aa18.13■□□□□ 0.49
APOE-205ENST00000485628 NOSTRINQ8IVI9 506 aa18.13■□□□□ 0.49
APOE-205ENST00000485628 VPS37CA5D8V6 355 aaPredicted RBP18.12■□□□□ 0.49
APOE-205ENST00000485628 F13A1P00488 732 aa18.12■□□□□ 0.49
APOE-205ENST00000485628 HOXC6P09630 235 aa18.12■□□□□ 0.49
APOE-205ENST00000485628 SREBF1P36956 1147 aa18.12■□□□□ 0.49
APOE-205ENST00000485628 SAFBQ15424 915 aaKnown RBP eCLIP18.12■□□□□ 0.49
APOE-205ENST00000485628 NSMFQ6X4W1 530 aa18.12■□□□□ 0.49
APOE-205ENST00000485628 KRT25Q7Z3Z0 450 aa18.12■□□□□ 0.49
APOE-205ENST00000485628 BRAPQ7Z569 592 aa18.12■□□□□ 0.49
APOE-205ENST00000485628 DNERQ8NFT8 737 aa18.12■□□□□ 0.49
APOE-205ENST00000485628 MORC4Q8TE76 937 aa18.12■□□□□ 0.49
APOE-205ENST00000485628 TRIM47Q96LD4 638 aa18.12■□□□□ 0.49
APOE-205ENST00000485628 PURBQ96QR8 312 aaKnown RBP18.12■□□□□ 0.49
APOE-205ENST00000485628 TAAR1Q96RJ0 339 aa18.12■□□□□ 0.49
APOE-205ENST00000485628 MMP19Q99542 508 aa18.12■□□□□ 0.49
APOE-205ENST00000485628 ZSCAN16Q9H4T2 348 aaPredicted RBP18.12■□□□□ 0.49
APOE-205ENST00000485628 BRMS1Q9HCU9 246 aa18.12■□□□□ 0.49
APOE-205ENST00000485628 CHMP5Q9NZZ3 219 aa18.12■□□□□ 0.49
APOE-205ENST00000485628 DIS3Q9Y2L1 958 aaKnown RBP18.12■□□□□ 0.49
APOE-205ENST00000485628 PLXNA1Q9UIW2 1896 aa18.12■□□□□ 0.49
APOE-205ENST00000485628 LOC102724159A0A0B4J2E5 919 aa18.11■□□□□ 0.49
APOE-205ENST00000485628 SOWAHBA6NEL2 793 aa18.11■□□□□ 0.49
APOE-205ENST00000485628 FAM205CA6NFA0 338 aa18.11■□□□□ 0.49
APOE-205ENST00000485628 CYP3A4P08684 503 aa18.11■□□□□ 0.49
APOE-205ENST00000485628 EDNRBP24530 442 aa18.11■□□□□ 0.49
APOE-205ENST00000485628 TOB1P50616 345 aaPredicted RBP18.11■□□□□ 0.49
APOE-205ENST00000485628 CNTN2Q02246 1040 aa18.11■□□□□ 0.49
APOE-205ENST00000485628 PWP2Q15269 919 aaKnown RBP18.11■□□□□ 0.49
APOE-205ENST00000485628 JAKMIP3Q5VZ66 844 aa18.11■□□□□ 0.49
APOE-205ENST00000485628 ANKRD35Q8N283 1001 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms