RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 GTPBP6O43824 516 aaPredicted RBP16.28■□□□□ 0.2
EPCAM-205ENST00000474691 NMT2O60551 498 aa16.28■□□□□ 0.2
EPCAM-205ENST00000474691 CALML3P27482 149 aa16.28■□□□□ 0.2
EPCAM-205ENST00000474691 PDE4DQ08499 809 aa16.28■□□□□ 0.2
EPCAM-205ENST00000474691 BAATQ14032 418 aaPredicted RBP16.28■□□□□ 0.2
EPCAM-205ENST00000474691 DUSP28Q4G0W2 176 aa16.28■□□□□ 0.2
EPCAM-205ENST00000474691 OR6J1Q8NGC5 347 aa16.28■□□□□ 0.2
EPCAM-205ENST00000474691 NOC4LQ9BVI4 516 aaKnown RBP16.28■□□□□ 0.2
EPCAM-205ENST00000474691 KIF28PB7ZC32 967 aa16.27■□□□□ 0.2
EPCAM-205ENST00000474691 ATP2A2P16615 1042 aaKnown RBP16.27■□□□□ 0.2
EPCAM-205ENST00000474691 SLC16A2P36021 539 aa16.27■□□□□ 0.2
EPCAM-205ENST00000474691 ALDH5A1P51649 535 aaPredicted RBP16.27■□□□□ 0.2
EPCAM-205ENST00000474691 RABGGTBP53611 331 aa16.27■□□□□ 0.2
EPCAM-205ENST00000474691 CHMP4BP1P59074 171 aa16.27■□□□□ 0.2
EPCAM-205ENST00000474691 AAK1Q2M2I8 961 aa16.27■□□□□ 0.2
EPCAM-205ENST00000474691 SYDE2Q5VT97 1194 aa16.27■□□□□ 0.2
EPCAM-205ENST00000474691 TAPT1Q6NXT6 567 aa16.27■□□□□ 0.2
EPCAM-205ENST00000474691 DEFB128Q7Z7B8 93 aa16.27■□□□□ 0.2
EPCAM-205ENST00000474691 SCLYQ96I15 445 aa16.27■□□□□ 0.2
EPCAM-205ENST00000474691 FTOQ9C0B1 505 aaKnown RBP eCLIP16.27■□□□□ 0.2
EPCAM-205ENST00000474691 ALDH8A1Q9H2A2 487 aaPredicted RBP16.27■□□□□ 0.2
EPCAM-205ENST00000474691 GPCPD1Q9NPB8 672 aa16.27■□□□□ 0.2
EPCAM-205ENST00000474691 PCDHA11Q9Y5I1 949 aa16.27■□□□□ 0.2
EPCAM-205ENST00000474691 TNKSO95271 1327 aa16.26■□□□□ 0.19
EPCAM-205ENST00000474691 FRMPD2Q68DX3 1309 aaPredicted RBP16.26■□□□□ 0.19
EPCAM-205ENST00000474691 MCM3APO60318 1980 aa16.26■□□□□ 0.19
EPCAM-205ENST00000474691 LOC102724159A0A0B4J2E5 919 aa16.26■□□□□ 0.19
EPCAM-205ENST00000474691 NKRFO15226 690 aaKnown RBP eCLIP16.26■□□□□ 0.19
EPCAM-205ENST00000474691 TOP1P11387 765 aaKnown RBP16.26■□□□□ 0.19
EPCAM-205ENST00000474691 PPP2R5BQ15173 497 aa16.26■□□□□ 0.19
EPCAM-205ENST00000474691 PWP2Q15269 919 aaKnown RBP16.26■□□□□ 0.19
EPCAM-205ENST00000474691 TMEM67Q5HYA8 995 aa16.26■□□□□ 0.19
EPCAM-205ENST00000474691 RNF207Q6ZRF8 634 aa16.26■□□□□ 0.19
EPCAM-205ENST00000474691 PI4K2BQ8TCG2 481 aa16.26■□□□□ 0.19
EPCAM-205ENST00000474691 ADAMTS19Q8TE59 1207 aa16.26■□□□□ 0.19
EPCAM-205ENST00000474691 EVI5LQ96CN4 794 aa16.26■□□□□ 0.19
EPCAM-205ENST00000474691 UHRF1Q96T88 793 aaPredicted RBP16.26■□□□□ 0.19
EPCAM-205ENST00000474691 MTG1Q9BT17 334 aaPredicted RBP16.26■□□□□ 0.19
EPCAM-205ENST00000474691 IL17RBQ9NRM6 502 aa16.26■□□□□ 0.19
EPCAM-205ENST00000474691 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.26■□□□□ 0.19
EPCAM-205ENST00000474691 YBX2Q9Y2T7 364 aaKnown RBP16.26■□□□□ 0.19
EPCAM-205ENST00000474691 DDX49Q9Y6V7 483 aaKnown RBP16.26■□□□□ 0.19
EPCAM-205ENST00000474691 KPNA6O60684 536 aa16.25■□□□□ 0.19
EPCAM-205ENST00000474691 CYP2C9P11712 490 aa16.25■□□□□ 0.19
EPCAM-205ENST00000474691 COL9A1P20849 921 aa16.25■□□□□ 0.19
EPCAM-205ENST00000474691 PURBQ96QR8 312 aaKnown RBP16.25■□□□□ 0.19
EPCAM-205ENST00000474691 WNT8AQ9H1J5 351 aa16.25■□□□□ 0.19
EPCAM-205ENST00000474691 RANBP17Q9H2T7 1088 aaKnown RBP16.25■□□□□ 0.19
EPCAM-205ENST00000474691 INCENPQ9NQS7 918 aa16.25■□□□□ 0.19
EPCAM-205ENST00000474691 HELLSQ9NRZ9 838 aa16.25■□□□□ 0.19
EPCAM-205ENST00000474691 TRMT13Q9NUP7 481 aaKnown RBP16.25■□□□□ 0.19
EPCAM-205ENST00000474691 UNC80Q8N2C7 3258 aa16.25■□□□□ 0.19
EPCAM-205ENST00000474691 ORC4O43929 436 aa16.24■□□□□ 0.19
EPCAM-205ENST00000474691 PTGS1P23219 599 aa16.24■□□□□ 0.19
EPCAM-205ENST00000474691 BFSP2Q13515 415 aa16.24■□□□□ 0.19
EPCAM-205ENST00000474691 ADGRE1Q14246 886 aa16.24■□□□□ 0.19
EPCAM-205ENST00000474691 ANKRD45Q5TZF3 282 aa16.24■□□□□ 0.19
EPCAM-205ENST00000474691 TTBK2Q6IQ55 1244 aa16.24■□□□□ 0.19
EPCAM-205ENST00000474691 SCFD2Q8WU76 684 aa16.24■□□□□ 0.19
EPCAM-205ENST00000474691 ANAPC4Q9UJX5 808 aa16.24■□□□□ 0.19
EPCAM-205ENST00000474691 GRIN2DO15399 1336 aa16.23■□□□□ 0.19
EPCAM-205ENST00000474691 NFIBO00712 420 aa16.23■□□□□ 0.19
EPCAM-205ENST00000474691 RFC2P35250 354 aa16.23■□□□□ 0.19
EPCAM-205ENST00000474691 PURAQ00577 322 aaKnown RBP16.23■□□□□ 0.19
EPCAM-205ENST00000474691 MFSD6Q6ZSS7 791 aa16.23■□□□□ 0.19
EPCAM-205ENST00000474691 CCDC155Q8N6L0 562 aa16.23■□□□□ 0.19
EPCAM-205ENST00000474691 OTUD7AQ8TE49 926 aaPredicted RBP16.23■□□□□ 0.19
EPCAM-205ENST00000474691 MORC4Q8TE76 937 aa16.23■□□□□ 0.19
EPCAM-205ENST00000474691 SLC9A7Q96T83 725 aa16.23■□□□□ 0.19
EPCAM-205ENST00000474691 TMEM47Q9BQJ4 181 aa16.23■□□□□ 0.19
EPCAM-205ENST00000474691 TRIM6-TRIM34B2RNG4 842 aa16.22■□□□□ 0.19
EPCAM-205ENST00000474691 TXNP10599 105 aaKnown RBP16.22■□□□□ 0.19
EPCAM-205ENST00000474691 MYOGP15173 224 aa16.22■□□□□ 0.19
EPCAM-205ENST00000474691 KCNJ6P48051 423 aa16.22■□□□□ 0.19
EPCAM-205ENST00000474691 TTLL4Q14679 1199 aa16.22■□□□□ 0.19
EPCAM-205ENST00000474691 NBPF20Q3BBV1 942 aa16.22■□□□□ 0.19
EPCAM-205ENST00000474691 MCMDC2Q4G0Z9 681 aa16.22■□□□□ 0.19
EPCAM-205ENST00000474691 BTNL9Q6UXG8 535 aa16.22■□□□□ 0.19
EPCAM-205ENST00000474691 RASGRP2Q7LDG7 609 aa16.22■□□□□ 0.19
EPCAM-205ENST00000474691 DNERQ8NFT8 737 aa16.22■□□□□ 0.19
EPCAM-205ENST00000474691 LAMA2P24043 3122 aaKnown RBP16.22■□□□□ 0.19
EPCAM-205ENST00000474691 MFAP1P55081 439 aaKnown RBP16.21■□□□□ 0.19
EPCAM-205ENST00000474691 USH1GQ495M9 461 aa16.21■□□□□ 0.19
EPCAM-205ENST00000474691 TMEM63BQ5T3F8 832 aa16.21■□□□□ 0.19
EPCAM-205ENST00000474691 VPS53Q5VIR6 699 aa16.21■□□□□ 0.19
EPCAM-205ENST00000474691 NFRKBQ6P4R8 1299 aa16.21■□□□□ 0.19
EPCAM-205ENST00000474691 SLC30A10Q6XR72 485 aa16.21■□□□□ 0.19
EPCAM-205ENST00000474691 TTC14Q96N46 770 aa16.21■□□□□ 0.19
EPCAM-205ENST00000474691 RNF41Q9H4P4 317 aaPredicted RBP16.21■□□□□ 0.19
EPCAM-205ENST00000474691 TCP11L1Q9NUJ3 509 aa16.21■□□□□ 0.19
EPCAM-205ENST00000474691 MYO9BQ13459 2157 aa16.21■□□□□ 0.19
EPCAM-205ENST00000474691 DHX16O60231 1041 aaKnown RBP16.2■□□□□ 0.18
EPCAM-205ENST00000474691 FGAP02671 866 aa16.2■□□□□ 0.18
EPCAM-205ENST00000474691 CA3P07451 260 aa16.2■□□□□ 0.18
EPCAM-205ENST00000474691 RPS6P62753 249 aaKnown RBP16.2■□□□□ 0.18
EPCAM-205ENST00000474691 PTPN11Q06124 597 aaPredicted RBP16.2■□□□□ 0.18
EPCAM-205ENST00000474691 ALX1Q15699 326 aa16.2■□□□□ 0.18
EPCAM-205ENST00000474691 PHOSPHO2Q8TCD6 241 aa16.2■□□□□ 0.18
EPCAM-205ENST00000474691 ZBED2Q9BTP6 218 aa16.2■□□□□ 0.18
EPCAM-205ENST00000474691 CERS4Q9HA82 394 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms