RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-215ENST00000441728 EYSQ5T1H1 3165 aa23.5■■□□□ 1.35
UBE2F-215ENST00000441728 LOC102724159A0A0B4J2E5 919 aa23.5■■□□□ 1.35
UBE2F-215ENST00000441728 B4DLN1 442 aa23.5■■□□□ 1.35
UBE2F-215ENST00000441728 TOP1P11387 765 aaKnown RBP23.5■■□□□ 1.35
UBE2F-215ENST00000441728 PTGS1P23219 599 aa23.5■■□□□ 1.35
UBE2F-215ENST00000441728 CALML3P27482 149 aa23.5■■□□□ 1.35
UBE2F-215ENST00000441728 MRPL12P52815 198 aaKnown RBP23.5■■□□□ 1.35
UBE2F-215ENST00000441728 PDE4DQ08499 809 aa23.5■■□□□ 1.35
UBE2F-215ENST00000441728 PWP2Q15269 919 aaKnown RBP23.5■■□□□ 1.35
UBE2F-215ENST00000441728 RASGRP2Q7LDG7 609 aa23.5■■□□□ 1.35
UBE2F-215ENST00000441728 MICALL1Q8N3F8 863 aa23.5■■□□□ 1.35
UBE2F-215ENST00000441728 ALDH8A1Q9H2A2 487 aaPredicted RBP23.5■■□□□ 1.35
UBE2F-215ENST00000441728 RANBP17Q9H2T7 1088 aaKnown RBP23.5■■□□□ 1.35
UBE2F-215ENST00000441728 ANAPC4Q9UJX5 808 aa23.5■■□□□ 1.35
UBE2F-215ENST00000441728 FRMPD2Q68DX3 1309 aaPredicted RBP23.5■■□□□ 1.35
UBE2F-215ENST00000441728 ORC4O43929 436 aa23.49■■□□□ 1.35
UBE2F-215ENST00000441728 PFKMP08237 780 aa23.49■■□□□ 1.35
UBE2F-215ENST00000441728 ACTN1P12814 892 aa23.49■■□□□ 1.35
UBE2F-215ENST00000441728 MRPS5P82675 430 aaKnown RBP23.49■■□□□ 1.35
UBE2F-215ENST00000441728 SCLYQ96I15 445 aa23.49■■□□□ 1.35
UBE2F-215ENST00000441728 PURBQ96QR8 312 aaKnown RBP23.49■■□□□ 1.35
UBE2F-215ENST00000441728 HELLSQ9NRZ9 838 aa23.49■■□□□ 1.35
UBE2F-215ENST00000441728 GRIN2DO15399 1336 aa23.49■■□□□ 1.35
UBE2F-215ENST00000441728 PPP2R5BQ15173 497 aa23.48■■□□□ 1.35
UBE2F-215ENST00000441728 ANKRD45Q5TZF3 282 aa23.48■■□□□ 1.35
UBE2F-215ENST00000441728 TTBK2Q6IQ55 1244 aa23.48■■□□□ 1.35
UBE2F-215ENST00000441728 RNF207Q6ZRF8 634 aa23.48■■□□□ 1.35
UBE2F-215ENST00000441728 MORC4Q8TE76 937 aa23.48■■□□□ 1.35
UBE2F-215ENST00000441728 ASB2Q96Q27 587 aa23.48■■□□□ 1.35
UBE2F-215ENST00000441728 MTG1Q9BT17 334 aaPredicted RBP23.48■■□□□ 1.35
UBE2F-215ENST00000441728 WNT8AQ9H1J5 351 aa23.48■■□□□ 1.35
UBE2F-215ENST00000441728 NOD1Q9Y239 953 aa23.48■■□□□ 1.35
UBE2F-215ENST00000441728 PCDHB15Q9Y5E8 787 aa23.48■■□□□ 1.35
UBE2F-215ENST00000441728 TNKSO95271 1327 aa23.48■■□□□ 1.35
UBE2F-215ENST00000441728 NFIBO00712 420 aa23.47■■□□□ 1.35
UBE2F-215ENST00000441728 ATP2A2P16615 1042 aaKnown RBP23.47■■□□□ 1.35
UBE2F-215ENST00000441728 RABGGTBP53611 331 aa23.47■■□□□ 1.35
UBE2F-215ENST00000441728 VPS53Q5VIR6 699 aa23.47■■□□□ 1.35
UBE2F-215ENST00000441728 DEFB128Q7Z7B8 93 aa23.47■■□□□ 1.35
UBE2F-215ENST00000441728 RETREG2Q8NC44 543 aa23.47■■□□□ 1.35
UBE2F-215ENST00000441728 YBX2Q9Y2T7 364 aaKnown RBP23.47■■□□□ 1.35
UBE2F-215ENST00000441728 PCDHA11Q9Y5I1 949 aa23.47■■□□□ 1.35
UBE2F-215ENST00000441728 NKRFO15226 690 aaKnown RBP eCLIP23.46■■□□□ 1.35
UBE2F-215ENST00000441728 CYP2C9P11712 490 aa23.46■■□□□ 1.35
UBE2F-215ENST00000441728 ADGRE1Q14246 886 aa23.46■■□□□ 1.35
UBE2F-215ENST00000441728 SKIV2LQ15477 1246 aaKnown RBP23.46■■□□□ 1.35
UBE2F-215ENST00000441728 TMEM63BQ5T3F8 832 aa23.46■■□□□ 1.35
UBE2F-215ENST00000441728 BTNL9Q6UXG8 535 aa23.46■■□□□ 1.35
UBE2F-215ENST00000441728 TMEM47Q9BQJ4 181 aa23.46■■□□□ 1.35
UBE2F-215ENST00000441728 TRMT13Q9NUP7 481 aaKnown RBP23.46■■□□□ 1.35
UBE2F-215ENST00000441728 CDH23Q9H251 3354 aa23.46■■□□□ 1.35
UBE2F-215ENST00000441728 MYO9BQ13459 2157 aa23.45■■□□□ 1.35
UBE2F-215ENST00000441728 KPNA6O60684 536 aa23.45■■□□□ 1.34
UBE2F-215ENST00000441728 CHMP4BP1P59074 171 aa23.45■■□□□ 1.34
UBE2F-215ENST00000441728 PURAQ00577 322 aaKnown RBP23.45■■□□□ 1.34
UBE2F-215ENST00000441728 ALX1Q15699 326 aa23.45■■□□□ 1.34
UBE2F-215ENST00000441728 SLC30A10Q6XR72 485 aa23.45■■□□□ 1.34
UBE2F-215ENST00000441728 SCFD2Q8WU76 684 aa23.45■■□□□ 1.34
UBE2F-215ENST00000441728 FOXP2O15409 715 aa23.44■■□□□ 1.34
UBE2F-215ENST00000441728 GTPBP6O43824 516 aaPredicted RBP23.44■■□□□ 1.34
UBE2F-215ENST00000441728 MCMDC2Q4G0Z9 681 aa23.44■■□□□ 1.34
UBE2F-215ENST00000441728 TMEM67Q5HYA8 995 aa23.44■■□□□ 1.34
UBE2F-215ENST00000441728 ADAMTS19Q8TE59 1207 aa23.44■■□□□ 1.34
UBE2F-215ENST00000441728 FTOQ9C0B1 505 aaKnown RBP eCLIP23.44■■□□□ 1.34
UBE2F-215ENST00000441728 PRUNE2Q8WUY3 3088 aa23.44■■□□□ 1.34
UBE2F-215ENST00000441728 GBF1Q92538 1859 aa23.43■■□□□ 1.34
UBE2F-215ENST00000441728 FGAP02671 866 aa23.43■■□□□ 1.34
UBE2F-215ENST00000441728 RFC2P35250 354 aa23.43■■□□□ 1.34
UBE2F-215ENST00000441728 MFSD6Q6ZSS7 791 aa23.43■■□□□ 1.34
UBE2F-215ENST00000441728 UHRF1Q96T88 793 aaPredicted RBP23.43■■□□□ 1.34
UBE2F-215ENST00000441728 TCP11L1Q9NUJ3 509 aa23.43■■□□□ 1.34
UBE2F-215ENST00000441728 TRIM6-TRIM34B2RNG4 842 aa23.42■■□□□ 1.34
UBE2F-215ENST00000441728 KIF28PB7ZC32 967 aa23.42■■□□□ 1.34
UBE2F-215ENST00000441728 PDHBP11177 359 aa23.42■■□□□ 1.34
UBE2F-215ENST00000441728 NOVP48745 357 aa23.42■■□□□ 1.34
UBE2F-215ENST00000441728 HAND2P61296 217 aa23.42■■□□□ 1.34
UBE2F-215ENST00000441728 BFSP2Q13515 415 aa23.42■■□□□ 1.34
UBE2F-215ENST00000441728 AAK1Q2M2I8 961 aa23.42■■□□□ 1.34
UBE2F-215ENST00000441728 NBPF20Q3BBV1 942 aa23.42■■□□□ 1.34
UBE2F-215ENST00000441728 DNERQ8NFT8 737 aa23.42■■□□□ 1.34
UBE2F-215ENST00000441728 TTC14Q96N46 770 aa23.42■■□□□ 1.34
UBE2F-215ENST00000441728 RNF41Q9H4P4 317 aaPredicted RBP23.42■■□□□ 1.34
UBE2F-215ENST00000441728 RBM47A0AV96 593 aaKnown RBP23.41■■□□□ 1.34
UBE2F-215ENST00000441728 FGRP09769 529 aa23.41■■□□□ 1.34
UBE2F-215ENST00000441728 TXNP10599 105 aaKnown RBP23.41■■□□□ 1.34
UBE2F-215ENST00000441728 PCP11498 1178 aaKnown RBP23.41■■□□□ 1.34
UBE2F-215ENST00000441728 MYOGP15173 224 aa23.41■■□□□ 1.34
UBE2F-215ENST00000441728 MFAP1P55081 439 aaKnown RBP23.41■■□□□ 1.34
UBE2F-215ENST00000441728 RPS6P62753 249 aaKnown RBP23.41■■□□□ 1.34
UBE2F-215ENST00000441728 TTLL4Q14679 1199 aa23.41■■□□□ 1.34
UBE2F-215ENST00000441728 USH1GQ495M9 461 aa23.41■■□□□ 1.34
UBE2F-215ENST00000441728 CCDC155Q8N6L0 562 aa23.41■■□□□ 1.34
UBE2F-215ENST00000441728 SLC9A7Q96T83 725 aa23.41■■□□□ 1.34
UBE2F-215ENST00000441728 WDR19Q8NEZ3 1342 aa23.4■■□□□ 1.34
UBE2F-215ENST00000441728 LCTP09848 1927 aa23.4■■□□□ 1.34
UBE2F-215ENST00000441728 COL9A1P20849 921 aa23.4■■□□□ 1.34
UBE2F-215ENST00000441728 ZNF543Q08ER8 600 aa23.4■■□□□ 1.34
UBE2F-215ENST00000441728 NFRKBQ6P4R8 1299 aa23.4■■□□□ 1.34
UBE2F-215ENST00000441728 CLEC4DQ8WXI8 215 aa23.4■■□□□ 1.34
UBE2F-215ENST00000441728 FAM227BQ96M60 508 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms