RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 IL17RAQ96F46 866 aa16.27■□□□□ 0.2
NUP50-201ENST00000347635 KDM4FA0A1W2PPD8 638 aa16.27■□□□□ 0.19
NUP50-201ENST00000347635 TXNRD1Q16881 649 aa16.27■□□□□ 0.19
NUP50-201ENST00000347635 SEL1L2Q5TEA6 688 aa16.27■□□□□ 0.19
NUP50-201ENST00000347635 SGMS1Q86VZ5 419 aa16.27■□□□□ 0.19
NUP50-201ENST00000347635 SPATS2Q86XZ4 545 aaKnown RBP16.27■□□□□ 0.19
NUP50-201ENST00000347635 CCDC77Q9BR77 488 aa16.27■□□□□ 0.19
NUP50-201ENST00000347635 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.27■□□□□ 0.19
NUP50-201ENST00000347635 MROH7-TTC4A0A0A0MT08 1334 aa16.27■□□□□ 0.19
NUP50-201ENST00000347635 CCT5P48643 541 aa16.27■□□□□ 0.19
NUP50-201ENST00000347635 DYNLL1P63167 89 aaKnown RBP16.27■□□□□ 0.19
NUP50-201ENST00000347635 DOK7Q18PE1 504 aa16.27■□□□□ 0.19
NUP50-201ENST00000347635 TTLL6Q8N841 843 aa16.27■□□□□ 0.19
NUP50-201ENST00000347635 MTUS1Q9ULD2 1270 aa16.27■□□□□ 0.19
NUP50-201ENST00000347635 FRMD4BQ9Y2L6 1034 aa16.27■□□□□ 0.19
NUP50-201ENST00000347635 ATP1A2P50993 1020 aa16.26■□□□□ 0.19
NUP50-201ENST00000347635 EPHB4P54760 987 aa16.26■□□□□ 0.19
NUP50-201ENST00000347635 APBA1Q02410 837 aa16.26■□□□□ 0.19
NUP50-201ENST00000347635 TRMT1LQ7Z2T5 733 aaKnown RBP16.26■□□□□ 0.19
NUP50-201ENST00000347635 RASGRP4Q8TDF6 673 aa16.26■□□□□ 0.19
NUP50-201ENST00000347635 NT5C3AQ9H0P0 336 aa16.26■□□□□ 0.19
NUP50-201ENST00000347635 CASP1P29466 404 aa16.26■□□□□ 0.19
NUP50-201ENST00000347635 GPR162Q16538 588 aa16.26■□□□□ 0.19
NUP50-201ENST00000347635 PEX26Q7Z412 305 aa16.26■□□□□ 0.19
NUP50-201ENST00000347635 AK8Q96MA6 479 aa16.26■□□□□ 0.19
NUP50-201ENST00000347635 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.26■□□□□ 0.19
NUP50-201ENST00000347635 TEX33O43247 280 aa16.26■□□□□ 0.19
NUP50-201ENST00000347635 RCAN1P53805 252 aa16.26■□□□□ 0.19
NUP50-201ENST00000347635 KCNQ4P56696 695 aa16.26■□□□□ 0.19
NUP50-201ENST00000347635 ZBED6P86452 979 aa16.26■□□□□ 0.19
NUP50-201ENST00000347635 PDIA6Q15084 440 aa16.26■□□□□ 0.19
NUP50-201ENST00000347635 HOOK3Q86VS8 718 aa16.26■□□□□ 0.19
NUP50-201ENST00000347635 ARHGEF1Q92888 912 aaKnown RBP16.26■□□□□ 0.19
NUP50-201ENST00000347635 KLRF2D3W0D1 207 aa16.26■□□□□ 0.19
NUP50-201ENST00000347635 ACTN4O43707 911 aaKnown RBP16.26■□□□□ 0.19
NUP50-201ENST00000347635 PLEKHA8P1O95397 391 aa16.26■□□□□ 0.19
NUP50-201ENST00000347635 TNFAIP3P21580 790 aa16.26■□□□□ 0.19
NUP50-201ENST00000347635 CUL4BQ13620 913 aa16.26■□□□□ 0.19
NUP50-201ENST00000347635 SCARF1Q14162 830 aa16.26■□□□□ 0.19
NUP50-201ENST00000347635 ALX1Q15699 326 aa16.26■□□□□ 0.19
NUP50-201ENST00000347635 CEP85LQ5SZL2 805 aa16.26■□□□□ 0.19
NUP50-201ENST00000347635 ARHGAP27Q6ZUM4 889 aa16.26■□□□□ 0.19
NUP50-201ENST00000347635 CCDC25Q86WR0 208 aa16.26■□□□□ 0.19
NUP50-201ENST00000347635 CABS1Q96KC9 395 aa16.26■□□□□ 0.19
NUP50-201ENST00000347635 DKC1O60832 514 aaKnown RBP eCLIP16.25■□□□□ 0.19
NUP50-201ENST00000347635 CDC25AP30304 524 aa16.25■□□□□ 0.19
NUP50-201ENST00000347635 CALCOCO2Q13137 446 aa16.25■□□□□ 0.19
NUP50-201ENST00000347635 PPP1R7Q15435 360 aa16.25■□□□□ 0.19
NUP50-201ENST00000347635 DALRD3Q5D0E6 543 aaKnown RBP16.25■□□□□ 0.19
NUP50-201ENST00000347635 ARL6IP4Q66PJ3 421 aaKnown RBP16.25■□□□□ 0.19
NUP50-201ENST00000347635 EFCAB13Q8IY85 973 aa16.25■□□□□ 0.19
NUP50-201ENST00000347635 PLA2G12BQ9BX93 195 aa16.25■□□□□ 0.19
NUP50-201ENST00000347635 ZCCHC17Q9NP64 241 aaKnown RBP16.25■□□□□ 0.19
NUP50-201ENST00000347635 GOLGA8HP0CJ92 632 aa16.25■□□□□ 0.19
NUP50-201ENST00000347635 LIG3P49916 1009 aa16.25■□□□□ 0.19
NUP50-201ENST00000347635 TCP10Q12799 353 aa16.25■□□□□ 0.19
NUP50-201ENST00000347635 TRIM31Q9BZY9 425 aa16.25■□□□□ 0.19
NUP50-201ENST00000347635 FBXO2Q9UK22 296 aaPredicted RBP16.25■□□□□ 0.19
NUP50-201ENST00000347635 KDM3AQ9Y4C1 1321 aa16.25■□□□□ 0.19
NUP50-201ENST00000347635 CTNNA2P26232 953 aa16.25■□□□□ 0.19
NUP50-201ENST00000347635 RASSF7Q02833 373 aa16.25■□□□□ 0.19
NUP50-201ENST00000347635 FNBP4Q8N3X1 1017 aaPredicted RBP16.25■□□□□ 0.19
NUP50-201ENST00000347635 CAPN7Q9Y6W3 813 aa16.25■□□□□ 0.19
NUP50-201ENST00000347635 KCNK3O14649 394 aa16.25■□□□□ 0.19
NUP50-201ENST00000347635 PPFIA4O75335 1185 aa16.25■□□□□ 0.19
NUP50-201ENST00000347635 CYP2C19P33261 490 aa16.25■□□□□ 0.19
NUP50-201ENST00000347635 CTNNA1P35221 906 aaKnown RBP16.25■□□□□ 0.19
NUP50-201ENST00000347635 PAIP2Q9BPZ3 127 aaKnown RBP16.25■□□□□ 0.19
NUP50-201ENST00000347635 RAD51AP2Q09MP3 1159 aa16.24■□□□□ 0.19
NUP50-201ENST00000347635 KIAA0825Q8IV33 1275 aa16.24■□□□□ 0.19
NUP50-201ENST00000347635 JRKLQ9Y4A0 524 aa16.24■□□□□ 0.19
NUP50-201ENST00000347635 A0A0G2JLW4 131 aa16.24■□□□□ 0.19
NUP50-201ENST00000347635 POLR2FP61218 127 aaKnown RBP16.24■□□□□ 0.19
NUP50-201ENST00000347635 DAAM2Q86T65 1068 aa16.24■□□□□ 0.19
NUP50-201ENST00000347635 ANKRD13CQ8N6S4 541 aa16.24■□□□□ 0.19
NUP50-201ENST00000347635 KAZALD1Q96I82 304 aa16.24■□□□□ 0.19
NUP50-201ENST00000347635 PPANQ9NQ55 473 aaKnown RBP16.24■□□□□ 0.19
NUP50-201ENST00000347635 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.24■□□□□ 0.199e-9■■■■■ 111.8
NUP50-201ENST00000347635 CSADQ9Y600 493 aa16.24■□□□□ 0.19
NUP50-201ENST00000347635 VIMP08670 466 aaKnown RBP16.24■□□□□ 0.19
NUP50-201ENST00000347635 ANTXR2P58335 489 aa16.24■□□□□ 0.19
NUP50-201ENST00000347635 TTC19Q6DKK2 380 aaPredicted RBP16.24■□□□□ 0.19
NUP50-201ENST00000347635 MTA3Q9BTC8 594 aa16.24■□□□□ 0.19
NUP50-201ENST00000347635 DISC1Q9NRI5 854 aa16.24■□□□□ 0.19
NUP50-201ENST00000347635 NBPF26B4DH59 902 aa16.23■□□□□ 0.19
NUP50-201ENST00000347635 MAP3K9P80192 1104 aa16.23■□□□□ 0.19
NUP50-201ENST00000347635 GUCY2DQ02846 1103 aa16.23■□□□□ 0.19
NUP50-201ENST00000347635 MTF1Q14872 753 aa16.23■□□□□ 0.19
NUP50-201ENST00000347635 NBPF10Q6P3W6 841 aaKnown RBP16.23■□□□□ 0.19
NUP50-201ENST00000347635 NBPF15Q8N660 670 aa16.23■□□□□ 0.19
NUP50-201ENST00000347635 DHX36Q9H2U1 1008 aaKnown RBP16.23■□□□□ 0.19
NUP50-201ENST00000347635 L2HGDHQ9H9P8 463 aa16.23■□□□□ 0.19
NUP50-201ENST00000347635 PANK4Q9NVE7 773 aa16.23■□□□□ 0.19
NUP50-201ENST00000347635 CCNE1P24864 410 aa16.23■□□□□ 0.19
NUP50-201ENST00000347635 GDAQ9Y2T3 454 aa16.23■□□□□ 0.19
NUP50-201ENST00000347635 FMR1Q06787 632 aaKnown RBP eCLIP16.23■□□□□ 0.19
NUP50-201ENST00000347635 CCDC50Q8IVM0 306 aa16.23■□□□□ 0.19
NUP50-201ENST00000347635 PRM3Q9NNZ6 103 aa16.23■□□□□ 0.19
NUP50-201ENST00000347635 DNM3Q9UQ16 869 aa16.23■□□□□ 0.19
NUP50-201ENST00000347635 CYP2D7A0A087X1C5 515 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms