RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 AdkP55264 361 aa10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Hps5P59438 1126 aa10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Snap25P60879 206 aa10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Polr2fP61219 127 aa10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 LRWD1Q8BUI3 648 aaKnown RBP10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Q91WD4 421 aa10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Ndufv1Q91YT0 464 aa10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Arfgap2Q99K28 520 aa10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Card14Q99KF0 999 aa10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Pik3c2bE9QAN8 1632 aa10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Nme9A0A1L1SUL6 329 aa10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Fyb2A2A995 729 aa10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Rad51bO35719 350 aa10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Tcp1P11983 556 aaKnown RBP10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Epha2Q03145 977 aa10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Tex35Q14BK3 207 aa10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Tfcp2l1Q3UNW5 479 aa10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Zbtb7bQ64321 544 aa10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Tmem132dQ76HP3 1097 aa10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Pank4Q80YV4 820 aa10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Tor4aQ8BH02 426 aa10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 D130040H23RikQ8BII3 405 aa10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Rbm41Q8JZV4 413 aa10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 WaslQ91YD9 501 aa10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Tlcd1Q99JT6 247 aa10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Ndufab1Q9CR21 156 aa10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Cd2bp2Q9CWK3 342 aaKnown RBP10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Ndst4Q9EQW8 872 aa10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Tmod4Q9JLH8 345 aa10.39□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Flot1O08917 428 aa10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Neurog2P70447 263 aa10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Eif3j1Q3UGC7 261 aaKnown RBP10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Rgl1Q60695 768 aa10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Eif3j2Q66JS6 263 aa10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Zbtb39Q6PDK0 712 aa10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Mxd3Q80US8 206 aa10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Bola2Q8BGS2 86 aa10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Acbd3Q8BMP6 525 aa10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Ccdc28aQ8CEI3 192 aa10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Sgpp1Q9JI99 430 aa10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Arl6ip4Q9JM93 229 aa10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Cul9Q80TT8 1865 aa10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Prss51A0A286YDY8 319 aa10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 EgfrQ01279 1210 aa10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Cfap100Q80VN0 613 aa10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Cplx4Q80WM3 160 aa10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Stoml1Q8CI66 399 aa10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Spata2Q8K004 515 aa10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 BaatQ91X34 420 aa10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 PpanQ91YU8 470 aaKnown RBP10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Sf3b3Q921M3 1217 aaKnown RBP10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 NkapQ9D0F4 415 aaKnown RBP10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Mroh8E9PYI4 1049 aa10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Arhgef16Q3U5C8 713 aa10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Tmem109Q3UBX0 243 aa10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Anks6Q6GQX6 883 aa10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Afg3l2Q8JZQ2 802 aaKnown RBP10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Spire2Q8K1S6 718 aa10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Eif4a3Q91VC3 411 aaKnown RBP10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Tnpo2Q99LG2 887 aaKnown RBP10.38□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Mdc1Q5PSV9 1707 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Frmd7A2AD83 703 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Gm10134F6ZQC6 126 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Tcp11Q01755 566 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Ric8aQ3TIR3 530 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Lmtk3Q5XJV6 1424 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Ccna1Q61456 421 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Ehbp1Q69ZW3 1231 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 BC048507Q80ZS7 89 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Rassf2Q8BMS9 326 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Pak2Q8CIN4 524 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Creb3l3Q91XE9 479 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 CoasyQ9DBL7 563 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Fbxl16A2RT62 479 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Tlr8P58682 1032 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 NeblQ0II04 452 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Eepd1Q3TGW2 569 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Rnf207Q3V3A7 635 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Hoxa13Q62424 386 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Cep70Q6IQY5 616 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Spag7Q7TNE3 227 aaKnown RBP10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Trim6Q8BGE7 488 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Kctd6Q8BNL5 237 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Tmem63cQ8CBX0 802 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 MypopQ8R4U1 393 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Tex21Q9R0U9 575 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Chd4Q6PDQ2 1915 aaKnown RBP10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 CpdO89001 1377 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Myo3bQ1EG27 1305 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Zfp174B9EJW5 407 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 A430078G23RikE9Q7Y4 484 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 FosP01101 380 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Ccdc114Q3UX62 658 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Fmnl3Q6ZPF4 1028 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Olfr119Q7TRJ5 321 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Fbxo18Q8K2I9 1042 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Med10Q9CXU0 135 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Sf3a3Q9D554 501 aaKnown RBP10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 MesdQ9ERE7 224 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Tubgcp6G5E8P0 1769 aa10.37□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms