RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 SpopQ6ZWS8 374 aa17.08■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Ano9P86044 747 aa17.08■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 EgfrQ01279 1210 aa17.08■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Gigyf2Q6Y7W8 1291 aaKnown RBP17.08■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Tmem132dQ76HP3 1097 aa17.08■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Rbm41Q8JZV4 413 aa17.08■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Mfap3lQ9D3X9 409 aa17.08■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Serpinb12Q9D7P9 423 aa17.08■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Mroh9G5E8L9 891 aa17.08■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Vat1lQ80TB8 417 aa17.08■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Rassf10Q8BL43 508 aa17.08■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 DexiQ9WUQ7 95 aa17.08■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Pus7B7ZNL8 666 aaKnown RBP17.07■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Cdh15P33146 784 aa17.07■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Tsen34Q8BMZ5 316 aa17.07■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Slc39a11Q8BWY7 342 aa17.07■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Pak2Q8CIN4 524 aa17.07■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Ces1Q8VCC2 565 aa17.07■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Atp6v0a4Q920R6 833 aa17.07■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Tex19.1Q99MV2 351 aa17.07■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Ankrd63A2ARS0 390 aa17.07■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Grem2O88273 168 aa17.07■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Idh1O88844 414 aaKnown RBP17.07■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Rps6ka1P18653 724 aa17.07■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Aimp1P31230 310 aaKnown RBP17.07■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Krt77Q6IFZ6 572 aa17.07■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Afg3l2Q8JZQ2 802 aaKnown RBP17.07■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Q9DAQ4 598 aa17.07■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Wdr19Q3UGF1 1341 aa17.07■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 FosP01101 380 aa17.07■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Fam161bQ8CB59 589 aa17.07■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Plcg2Q8CIH5 1265 aa17.07■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Sept3Q9Z1S5 350 aa17.07■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Krt13P08730 437 aa17.07■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Ighmbp2P40694 993 aa17.07■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Fam196bQ6GQV1 535 aa17.07■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Mroh8E9PYI4 1049 aa17.06■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Stag2O35638 1231 aa17.06■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Slc7a1Q09143 622 aa17.06■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Apopt1Q9CQW7 192 aa17.06■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Wdr64Q9D565 1086 aa17.06■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Rcan1Q9JHG6 198 aa17.06■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 PigsQ6PD26 555 aaKnown RBP17.06■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Rcor2Q8C796 523 aa17.06■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Zc3h13E9Q784 1729 aaKnown RBP17.06■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Hmx1O70218 332 aa17.06■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Ube3cQ80U95 1083 aa17.06■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Myoz2Q9JJW5 264 aa17.06■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Grin1P35438 938 aa17.06■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Clrn2B2RVW2 232 aa17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 ErmardE9Q048 622 aa17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Eef1dP57776 281 aaKnown RBP17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Sox13Q04891 613 aa17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Med10Q9CXU0 135 aa17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Eif4enif1Q9EST3 983 aaKnown RBP17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Ubxn8Q9QZ49 277 aa17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Tex13c2A0A0G2JGA3 530 aa17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Prss51A0A286YDY8 319 aa17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Flot1O08917 428 aa17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Cfap100Q80VN0 613 aa17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Eef1gQ9D8N0 437 aaKnown RBP17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Kif13aQ9EQW7 1749 aa17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Gucy1a2F8VQK3 730 aa17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Atp6v0a2P15920 856 aa17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Kcnv2Q8CFS6 562 aa17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Ddx41Q91VN6 622 aaKnown RBP17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 SyncQ9EPM5 470 aa17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Cbfa2t2O70374 594 aa17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Drc1Q3USS3 753 aa17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Kiaa1211Q5PR69 1207 aa17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Meis1Q60954 390 aa17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Lamc2Q61092 1191 aa17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Vmn1r199Q8R280 367 aa17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Usp11Q99K46 921 aa17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Card14Q99KF0 999 aa17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Pstpip2Q99M15 334 aa17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 MycbpQ9EQS3 103 aa17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Tmod4Q9JLH8 345 aa17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 GsdmeQ9Z2D3 512 aa17.05■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Cnbd1B1AWM0 430 aa17.04■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Cyp2d9P11714 504 aa17.04■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Snap25P60879 206 aa17.04■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Rgl1Q60695 768 aa17.04■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Pank4Q80YV4 820 aa17.04■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Gjb4Q02738 266 aa17.04■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Llgl2Q3TJ91 1027 aa17.04■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Ddx19bQ8BZY3 494 aa17.04■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Spata2Q8K004 515 aa17.04■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Cst12Q9DAN8 128 aa17.04■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Ap5z1Q3U829 807 aa17.04■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Tlcd1Q99JT6 247 aa17.04■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Dph5Q9CWQ0 281 aa17.04■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Rwdd2aQ9D9S3 292 aa17.04■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Ckap2Q3V1H1 664 aa17.04■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Il17raQ60943 864 aa17.04■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Cdk4P30285 303 aa17.03■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Trip13Q3UA06 432 aa17.03■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Fyb2A2A995 729 aa17.03■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Prss40A6H6T1 365 aa17.03■□□□□ 0.32
Ccdc88b-201ENSMUST00000113440 Nck2O55033 380 aa17.03■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 60.8 ms