RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Pcdhb15Q91Y04 786 aa20.11■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Twf2Q9Z0P5 349 aaKnown RBP20.11■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Lnx1O70263 728 aa20.1■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Cdr2P97817 455 aa20.1■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Pdzph1Q8BGR1 1238 aa20.1■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Micall1Q8BGT6 870 aa20.1■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Hgh1Q8C3I8 393 aa20.1■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Trim68Q8K243 485 aa20.1■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Tmem47Q9JJG6 181 aa20.1■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Myo3bQ1EG27 1305 aa20.1■□□□□ 0.81
Scaf11-201ENSMUST00000047835 MycP01108 439 aa20.1■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Adgra1Q8C4G9 578 aa20.1■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Ces1dQ8VCT4 565 aa20.1■□□□□ 0.81
Scaf11-201ENSMUST00000047835 IqcdQ9D3V1 458 aa20.1■□□□□ 0.81
Scaf11-201ENSMUST00000047835 CltcQ68FD5 1675 aaKnown RBP20.1■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Gm45140A0A0N4SUM8 220 aa20.1■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Gm10392Q3V3I3 114 aa20.1■□□□□ 0.81
Scaf11-201ENSMUST00000047835 HomezQ80W88 542 aa20.1■□□□□ 0.81
Scaf11-201ENSMUST00000047835 HdlbpQ8VDJ3 1268 aaKnown RBP20.1■□□□□ 0.81
Scaf11-201ENSMUST00000047835 4921524L21RikQ9D5T2 438 aa20.1■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Hic2Q9JLZ6 619 aaKnown RBP20.1■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Scg2Q03517 617 aa20.1■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Birc2Q62210 612 aa20.1■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Mapk4Q6P5G0 583 aa20.1■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Wdr3Q8BHB4 942 aaKnown RBP20.1■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Tekt2Q922G7 430 aa20.1■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Cyp3a25O09158 503 aa20.09■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Eif3j2Q66JS6 263 aa20.09■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Csgalnact2Q8C1F4 542 aa20.09■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Pak2Q8CIN4 524 aa20.09■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Sept2P42208 361 aaKnown RBP20.09■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Ddx41Q91VN6 622 aaKnown RBP20.09■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Psen2Q61144 448 aa20.09■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Eef2kO08796 724 aa20.09■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Cyp11b2P15539 500 aa20.09■□□□□ 0.81
Scaf11-201ENSMUST00000047835 BC048507Q80ZS7 89 aa20.09■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Gbp7Q91Z40 638 aa20.09■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Gins2Q9D600 185 aa20.09■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Cyp19a1P28649 503 aa20.08■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Nbr1P97432 988 aa20.08■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Nom1Q3UFM5 854 aaKnown RBP20.08■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Eif3j1Q3UGC7 261 aaKnown RBP20.08■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Syne3Q4FZC9 975 aa20.08■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Znf365Q8BG89 408 aa20.08■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Scfd1Q8BRF7 639 aaKnown RBP20.08■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Cdc26Q99JP4 85 aa20.08■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Atp6v1e2Q9D593 226 aa20.08■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Grm1P97772 1199 aa20.08■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Znf652Q5DU09 608 aa20.08■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Gpr101Q80T62 511 aa20.08■□□□□ 0.81
Scaf11-201ENSMUST00000047835 PdclQ9DBX2 301 aa20.08■□□□□ 0.81
Scaf11-201ENSMUST00000047835 PycardQ9EPB4 193 aa20.08■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Diaph2O70566 1098 aa20.08■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Kiaa1468Q148V7 1216 aa20.08■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Pik3r1P26450 724 aa20.08■□□□□ 0.8
Scaf11-201ENSMUST00000047835 MmeQ61391 750 aa20.08■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Ppp2r5aQ6PD03 486 aa20.08■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Acbd3Q8BMP6 525 aa20.08■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Fam217aQ9D9W6 419 aa20.08■□□□□ 0.8
Scaf11-201ENSMUST00000047835 IdeQ9JHR7 1019 aa20.08■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Prkab1Q9R078 270 aa20.08■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Bfsp1A2AMT1 669 aa20.08■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Gna14P30677 355 aa20.08■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Mknk2Q8CDB0 459 aa20.08■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Ttc8Q8VD72 515 aa20.08■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Uhrf1bp1B2KF50 1429 aa20.07■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Aco1P28271 889 aaKnown RBP20.07■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Ces5aQ6AW46 575 aa20.07■□□□□ 0.8
Scaf11-201ENSMUST00000047835 1700016D06RikQ9DAA5 166 aa20.07■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Cep170bQ80U49 1574 aa20.07■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Gm5580A0A0N4SVP8 411 aa20.07■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Serpinb8O08800 374 aaKnown RBP20.07■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Slc51bQ80WK2 128 aa20.07■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Eef1gQ9D8N0 437 aaKnown RBP20.07■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Krt71Q9R0H5 524 aa20.07■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Flt4P35917 1363 aa20.07■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Naa35Q6PHQ8 725 aa20.07■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Zfp408H7BX78 710 aa20.07■□□□□ 0.8
Scaf11-201ENSMUST00000047835 H2afzP0C0S6 128 aa20.07■□□□□ 0.8
Scaf11-201ENSMUST00000047835 CatspereP0DP43 985 aa20.07■□□□□ 0.8
Scaf11-201ENSMUST00000047835 NsfP46460 744 aa20.07■□□□□ 0.8
Scaf11-201ENSMUST00000047835 H2afvQ3THW5 128 aa20.07■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Drc1Q3USS3 753 aa20.07■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Nlrp9bQ66X22 1003 aa20.07■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Slfnl1Q8BHW9 410 aa20.07■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Pcdhb12Q91Y07 789 aa20.07■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Tmod3Q9JHJ0 352 aa20.07■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Rmi1Q9D4G9 616 aa20.06■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Actn2Q9JI91 894 aa20.06■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Akap12Q9WTQ5 1684 aa20.06■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Exoc3l2D3YUP5 789 aa20.06■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Camk4P08414 469 aa20.06■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Gm3414Q3TNU4 584 aa20.06■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Slc9a1Q61165 820 aa20.06■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Kif11Q6P9P6 1052 aa20.06■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Serpina3bQ8BYY9 420 aa20.06■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Zfp317Q8C0Q5 607 aa20.06■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Slc26a7Q8R2Z3 656 aa20.06■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Ndufb9Q9CQJ8 179 aa20.06■□□□□ 0.8
Scaf11-201ENSMUST00000047835 Vmn2r23E9PXI5 849 aa20.06■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms