Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Gm25239-201ENSMUST00000174915 86 ntBASIC41.88■■■■■ 4.29
Trim68Q8K243 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.96■■■■□ 3.83
Trim68Q8K243 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC38.32■■■■□ 3.72
Trim68Q8K243 Gm24109-201ENSMUST00000175489 103 ntBASIC36.55■■■■□ 3.44
Trim68Q8K243 Gm15042-201ENSMUST00000120212 883 ntBASIC36.13■■■■□ 3.37
Trim68Q8K243 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35.37■■■■□ 3.25
Trim68Q8K243 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
Trim68Q8K243 Gm15045-201ENSMUST00000117359 883 ntBASIC35.24■■■■□ 3.23
Trim68Q8K243 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
Trim68Q8K243 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Trim68Q8K243 Gm23366-201ENSMUST00000175022 89 ntBASIC34.88■■■■□ 3.17
Trim68Q8K243 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.27■■■■□ 3.08
Trim68Q8K243 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Trim68Q8K243 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.93■■■■□ 3.02
Trim68Q8K243 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.93■■■■□ 3.02
Trim68Q8K243 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
Trim68Q8K243 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Trim68Q8K243 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
Trim68Q8K243 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.43■■■□□ 2.94
Trim68Q8K243 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Trim68Q8K243 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.21■■■□□ 2.91
Trim68Q8K243 Gm25238-201ENSMUST00000174914 89 ntBASIC33.21■■■□□ 2.91
Trim68Q8K243 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Trim68Q8K243 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Trim68Q8K243 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.05■■■□□ 2.88
Trim68Q8K243 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.76■■■□□ 2.84
Trim68Q8K243 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Trim68Q8K243 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Trim68Q8K243 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.46■■■□□ 2.79
Trim68Q8K243 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Trim68Q8K243 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.37■■■□□ 2.77
Trim68Q8K243 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Trim68Q8K243 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.19■■■□□ 2.74
Trim68Q8K243 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Trim68Q8K243 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.18■■■□□ 2.74
Trim68Q8K243 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
Trim68Q8K243 Psd-208ENSMUST00000224556 2034 ntBASIC32.11■■■□□ 2.73
Trim68Q8K243 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.06■■■□□ 2.72
Trim68Q8K243 Gm25262-201ENSMUST00000174934 133 ntBASIC32.03■■■□□ 2.72
Trim68Q8K243 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32■■■□□ 2.71
Trim68Q8K243 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Trim68Q8K243 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Trim68Q8K243 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.8■■■□□ 2.68
Trim68Q8K243 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.72■■■□□ 2.67
Trim68Q8K243 Gm27325-201ENSMUST00000175467 74 ntBASIC31.55■■■□□ 2.64
Trim68Q8K243 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.51■■■□□ 2.63
Trim68Q8K243 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.51■■■□□ 2.63
Trim68Q8K243 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Trim68Q8K243 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
Trim68Q8K243 Gm26115-201ENSMUST00000175605 87 ntBASIC31.42■■■□□ 2.62
Trim68Q8K243 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.4■■■□□ 2.62
Trim68Q8K243 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Trim68Q8K243 Rab21-202ENSMUST00000218831 843 ntBASIC31.29■■■□□ 2.6
Trim68Q8K243 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.26■■■□□ 2.59
Trim68Q8K243 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Trim68Q8K243 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Trim68Q8K243 Gm8109-201ENSMUST00000194076 746 ntBASIC31.23■■■□□ 2.59
Trim68Q8K243 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
Trim68Q8K243 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Trim68Q8K243 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Trim68Q8K243 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Trim68Q8K243 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Trim68Q8K243 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Trim68Q8K243 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.02■■■□□ 2.56
Trim68Q8K243 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.94■■■□□ 2.54
Trim68Q8K243 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
Trim68Q8K243 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.81■■■□□ 2.52
Trim68Q8K243 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Trim68Q8K243 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.69■■■□□ 2.5
Trim68Q8K243 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Trim68Q8K243 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Trim68Q8K243 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Trim68Q8K243 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Trim68Q8K243 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
Trim68Q8K243 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Trim68Q8K243 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.46■■■□□ 2.47
Trim68Q8K243 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Trim68Q8K243 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30.43■■■□□ 2.46
Trim68Q8K243 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Trim68Q8K243 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Trim68Q8K243 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.39■■■□□ 2.46
Trim68Q8K243 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Trim68Q8K243 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.37■■■□□ 2.45
Trim68Q8K243 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.36■■■□□ 2.45
Trim68Q8K243 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Trim68Q8K243 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Trim68Q8K243 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Trim68Q8K243 Gm17082-201ENSMUST00000166043 1091 ntBASIC30.29■■■□□ 2.44
Trim68Q8K243 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.2■■■□□ 2.42
Trim68Q8K243 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Trim68Q8K243 Gm24804-201ENSMUST00000174982 85 ntBASIC30.14■■■□□ 2.42
Trim68Q8K243 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
Trim68Q8K243 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.06■■■□□ 2.4
Trim68Q8K243 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
Trim68Q8K243 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
Trim68Q8K243 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.05■■■□□ 2.4
Trim68Q8K243 Gm27322-201ENSMUST00000184007 104 ntBASIC29.99■■■□□ 2.39
Trim68Q8K243 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Trim68Q8K243 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
Trim68Q8K243 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.97■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms