RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Cwc15Q9JHS9 229 aaKnown RBP18.29■□□□□ 0.52
Shh-201ENSMUST00000002708 Mtmr9Q9Z2D0 545 aa18.29■□□□□ 0.52
Shh-201ENSMUST00000002708 Gm7356A0A087WSA6 508 aa18.29■□□□□ 0.52
Shh-201ENSMUST00000002708 Etnk2A7MCT6 385 aa18.29■□□□□ 0.52
Shh-201ENSMUST00000002708 Trim30cD3YVI9 513 aa18.29■□□□□ 0.52
Shh-201ENSMUST00000002708 Ddx3yQ62095 658 aaKnown RBP18.29■□□□□ 0.52
Shh-201ENSMUST00000002708 Fbxo18Q8K2I9 1042 aa18.29■□□□□ 0.52
Shh-201ENSMUST00000002708 Prpf6Q91YR7 941 aaKnown RBP18.29■□□□□ 0.52
Shh-201ENSMUST00000002708 Gm10378F6XQQ1 160 aa18.28■□□□□ 0.52
Shh-201ENSMUST00000002708 Prl2c2P04095 224 aa18.28■□□□□ 0.52
Shh-201ENSMUST00000002708 Ifnar1P33896 590 aa18.28■□□□□ 0.52
Shh-201ENSMUST00000002708 Ccna1Q61456 421 aa18.28■□□□□ 0.52
Shh-201ENSMUST00000002708 Znf280dQ68FE8 974 aa18.28■□□□□ 0.52
Shh-201ENSMUST00000002708 ParnQ8VDG3 624 aa18.28■□□□□ 0.52
Shh-201ENSMUST00000002708 Col11a2Q64739 1736 aa18.28■□□□□ 0.52
Shh-201ENSMUST00000002708 Zfpm1O35615 995 aa18.28■□□□□ 0.52
Shh-201ENSMUST00000002708 Ap1g2O88512 791 aa18.28■□□□□ 0.52
Shh-201ENSMUST00000002708 Ppp1r7Q3UM45 361 aa18.28■□□□□ 0.52
Shh-201ENSMUST00000002708 AsnsQ61024 561 aa18.28■□□□□ 0.52
Shh-201ENSMUST00000002708 Tubb2aQ7TMM9 445 aa18.28■□□□□ 0.52
Shh-201ENSMUST00000002708 Hs2st1Q8R3H7 356 aa18.28■□□□□ 0.52
Shh-201ENSMUST00000002708 Tubb2bQ9CWF2 445 aa18.28■□□□□ 0.52
Shh-201ENSMUST00000002708 Akap8Q9DBR0 687 aaKnown RBP18.28■□□□□ 0.52
Shh-201ENSMUST00000002708 Ubr3Q5U430 1889 aa18.28■□□□□ 0.52
Shh-201ENSMUST00000002708 Sycp1Q62209 993 aa18.27■□□□□ 0.52
Shh-201ENSMUST00000002708 Grm4Q68EF4 912 aa18.27■□□□□ 0.52
Shh-201ENSMUST00000002708 Papd7Q6PB75 542 aa18.27■□□□□ 0.52
Shh-201ENSMUST00000002708 Jade2Q6ZQF7 829 aa18.27■□□□□ 0.52
Shh-201ENSMUST00000002708 Spag7Q7TNE3 227 aaKnown RBP18.27■□□□□ 0.52
Shh-201ENSMUST00000002708 EpgnQ924X1 152 aa18.27■□□□□ 0.52
Shh-201ENSMUST00000002708 Gdf11Q9Z1W4 405 aa18.27■□□□□ 0.52
Shh-201ENSMUST00000002708 Akap2O54931 893 aa18.27■□□□□ 0.52
Shh-201ENSMUST00000002708 Rhpn1Q61085 643 aa18.27■□□□□ 0.52
Shh-201ENSMUST00000002708 Asic3Q6X1Y6 530 aa18.27■□□□□ 0.52
Shh-201ENSMUST00000002708 CpzQ8R4V4 654 aa18.27■□□□□ 0.52
Shh-201ENSMUST00000002708 CutaQ9CQ89 177 aa18.27■□□□□ 0.52
Shh-201ENSMUST00000002708 Snx12O70493 165 aa18.27■□□□□ 0.51
Shh-201ENSMUST00000002708 Lilrb3P97484 841 aa18.27■□□□□ 0.51
Shh-201ENSMUST00000002708 Fam178bQ24JP3 464 aa18.27■□□□□ 0.51
Shh-201ENSMUST00000002708 Ankrd13dQ6PD24 605 aa18.27■□□□□ 0.51
Shh-201ENSMUST00000002708 DaglaQ6WQJ1 1044 aa18.27■□□□□ 0.51
Shh-201ENSMUST00000002708 KhnynQ80U38 671 aa18.27■□□□□ 0.51
Shh-201ENSMUST00000002708 AdpgkQ8VDL4 496 aa18.27■□□□□ 0.51
Shh-201ENSMUST00000002708 Adcy3Q8VHH7 1145 aa18.27■□□□□ 0.51
Shh-201ENSMUST00000002708 Lzts2Q91YU6 671 aa18.27■□□□□ 0.51
Shh-201ENSMUST00000002708 Cd274Q9EP73 290 aa18.27■□□□□ 0.51
Shh-201ENSMUST00000002708 Arl6ip4Q9JM93 229 aa18.27■□□□□ 0.51
Shh-201ENSMUST00000002708 JcadQ5DTX6 1320 aa18.26■□□□□ 0.51
Shh-201ENSMUST00000002708 SarsP26638 512 aaKnown RBP18.26■□□□□ 0.51
Shh-201ENSMUST00000002708 Stim1P70302 685 aa18.26■□□□□ 0.51
Shh-201ENSMUST00000002708 Kcnb1Q03717 857 aa18.26■□□□□ 0.51
Shh-201ENSMUST00000002708 Atp8b1Q148W0 1251 aa18.26■□□□□ 0.51
Shh-201ENSMUST00000002708 Dok7Q18PE0 504 aa18.26■□□□□ 0.51
Shh-201ENSMUST00000002708 Tnni3kQ5GIG6 834 aa18.26■□□□□ 0.51
Shh-201ENSMUST00000002708 Pde1cQ64338 706 aa18.26■□□□□ 0.51
Shh-201ENSMUST00000002708 Asic1Q6NXK8 526 aa18.26■□□□□ 0.51
Shh-201ENSMUST00000002708 Zbtb39Q6PDK0 712 aa18.26■□□□□ 0.51
Shh-201ENSMUST00000002708 Krit1Q6S5J6 736 aa18.26■□□□□ 0.51
Shh-201ENSMUST00000002708 Rab11fip4Q8BQP8 635 aa18.26■□□□□ 0.51
Shh-201ENSMUST00000002708 Spata16Q8C636 571 aa18.26■□□□□ 0.51
Shh-201ENSMUST00000002708 Pcdh11xF6ZNL5 1338 aa18.26■□□□□ 0.51
Shh-201ENSMUST00000002708 Ube3aO08759 870 aa18.26■□□□□ 0.51
Shh-201ENSMUST00000002708 PurbO35295 324 aaKnown RBP18.26■□□□□ 0.51
Shh-201ENSMUST00000002708 Wee1P47810 646 aa18.26■□□□□ 0.51
Shh-201ENSMUST00000002708 Bend4P86174 541 aa18.26■□□□□ 0.51
Shh-201ENSMUST00000002708 Kdm1aQ6ZQ88 853 aa18.26■□□□□ 0.51
Shh-201ENSMUST00000002708 Vcpip1Q8CDG3 1220 aa18.26■□□□□ 0.51
Shh-201ENSMUST00000002708 Fam193aQ8CGI1 1231 aaKnown RBP18.26■□□□□ 0.51
Shh-201ENSMUST00000002708 GlyctkQ8QZY2 523 aa18.26■□□□□ 0.51
Shh-201ENSMUST00000002708 Galntl5Q9D4M9 431 aa18.26■□□□□ 0.51
Shh-201ENSMUST00000002708 Gtf2iQ9ESZ8 998 aaKnown RBP18.26■□□□□ 0.51
Shh-201ENSMUST00000002708 Tmem35bQ3U0Y2 150 aa18.25■□□□□ 0.51
Shh-201ENSMUST00000002708 Ccdc114Q3UX62 658 aa18.25■□□□□ 0.51
Shh-201ENSMUST00000002708 Sumf1Q8R0F3 372 aa18.25■□□□□ 0.51
Shh-201ENSMUST00000002708 St5Q924W7 1134 aa18.25■□□□□ 0.51
Shh-201ENSMUST00000002708 Ccdc96Q9CR92 584 aa18.25■□□□□ 0.51
Shh-201ENSMUST00000002708 March8Q9DBD2 286 aa18.25■□□□□ 0.51
Shh-201ENSMUST00000002708 Rbm6S4R1W5 1118 aaKnown RBP18.25■□□□□ 0.51
Shh-201ENSMUST00000002708 Scn9aQ62205 1984 aa18.25■□□□□ 0.51
Shh-201ENSMUST00000002708 Ccdc24E9PUW8 296 aa18.25■□□□□ 0.51
Shh-201ENSMUST00000002708 Tcp10bE9PYJ0 438 aa18.25■□□□□ 0.51
Shh-201ENSMUST00000002708 Vmn2r71L7N2D8 855 aa18.25■□□□□ 0.51
Shh-201ENSMUST00000002708 Sema6bO54951 886 aa18.25■□□□□ 0.51
Shh-201ENSMUST00000002708 Gna11P21278 359 aa18.25■□□□□ 0.51
Shh-201ENSMUST00000002708 Man1a2P39098 641 aa18.25■□□□□ 0.51
Shh-201ENSMUST00000002708 Pafah1b1P63005 410 aaKnown RBP18.25■□□□□ 0.51
Shh-201ENSMUST00000002708 Terf1P70371 421 aa18.25■□□□□ 0.51
Shh-201ENSMUST00000002708 Zfp781Q0P5U5 243 aa18.25■□□□□ 0.51
Shh-201ENSMUST00000002708 Gngt1Q61012 74 aa18.25■□□□□ 0.51
Shh-201ENSMUST00000002708 Glg1Q61543 1175 aaKnown RBP18.25■□□□□ 0.51
Shh-201ENSMUST00000002708 Mcm7Q61881 719 aaKnown RBP18.25■□□□□ 0.51
Shh-201ENSMUST00000002708 Cct8l1Q80YT3 562 aa18.25■□□□□ 0.51
Shh-201ENSMUST00000002708 Trim9Q8C7M3 817 aa18.25■□□□□ 0.51
Shh-201ENSMUST00000002708 Tldc1Q8K0P3 455 aa18.25■□□□□ 0.51
Shh-201ENSMUST00000002708 Ushbp1Q8R370 680 aa18.25■□□□□ 0.51
Shh-201ENSMUST00000002708 NeblQ0II04 452 aa18.24■□□□□ 0.51
Shh-201ENSMUST00000002708 Onecut3Q8K557 490 aa18.24■□□□□ 0.51
Shh-201ENSMUST00000002708 Klra17Q9JMA4 273 aa18.24■□□□□ 0.51
Shh-201ENSMUST00000002708 Klrc1Q9Z202 244 aa18.24■□□□□ 0.51
Shh-201ENSMUST00000002708 LdhaP06151 332 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 66.4 ms