RNA–Protein interactions for RNA: snR45

snR45, Transcript of C/D box small nucleolar RNA (snoRNA) but not shown to be active, yeast

Gene snR45, Length 172 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR45	snR45	RCN2	Q12044	265 aa		0.09	□□□□□ -2.4
snR45	snR45	SPE3	Q12074	293 aa	Known RBP	0.09	□□□□□ -2.4
snR45	snR45	PSF3	Q12146	194 aa		0.09	□□□□□ -2.4
snR45	snR45	NCE102	Q12207	173 aa	RIP-Chip data	0.09	□□□□□ -2.4	not detected
snR45	snR45	SAC3	P46674	1301 aa		0.09	□□□□□ -2.4
snR45	snR45	PDR18	P53756	1333 aa		0.09	□□□□□ -2.4
snR45	snR45	CIT1	P00890	479 aa		0.08	□□□□□ -2.4
snR45	snR45	PAB1	P04147	577 aa	Known RBP RIP-Chip data	0.08	□□□□□ -2.4	not detected
snR45	snR45	SUP35	P05453	685 aa	Known RBP	0.08	□□□□□ -2.4
snR45	snR45	RPL15A	P05748	204 aa	Known RBP	0.08	□□□□□ -2.4
snR45	snR45	MSF1	P08425	469 aa		0.08	□□□□□ -2.4
snR45	snR45	CIT2	P08679	460 aa		0.08	□□□□□ -2.4
snR45	snR45	MRS3	P10566	314 aa		0.08	□□□□□ -2.4
snR45	snR45	SEC63	P14906	663 aa		0.08	□□□□□ -2.4
snR45	snR45	VPS3	P23643	1011 aa		0.08	□□□□□ -2.4
snR45	snR45	MIH1	P23748	554 aa		0.08	□□□□□ -2.4
snR45	snR45	GFD2	P25370	566 aa	Known RBP	0.08	□□□□□ -2.4
snR45	snR45	MGR1	P25573	417 aa		0.08	□□□□□ -2.4
snR45	snR45	MRC1	P25588	1096 aa		0.08	□□□□□ -2.4
snR45	snR45	RPB9	P27999	122 aa		0.08	□□□□□ -2.4
snR45	snR45	SIN4	P32259	974 aa		0.08	□□□□□ -2.4
snR45	snR45	RME1	P32338	300 aa	Known RBP	0.08	□□□□□ -2.4
snR45	snR45	PLC1	P32383	869 aa		0.08	□□□□□ -2.4
snR45	snR45	VPH1	P32563	840 aa	Known RBP	0.08	□□□□□ -2.4
snR45	snR45	MTC7	P32633	139 aa		0.08	□□□□□ -2.4
snR45	snR45	MRP4	P32902	394 aa		0.08	□□□□□ -2.4
snR45	snR45	CSE2	P33308	149 aa		0.08	□□□□□ -2.4
snR45	snR45	TAF14	P35189	244 aa		0.08	□□□□□ -2.4
snR45	snR45	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.08	□□□□□ -2.4	not detected
snR45	snR45	MCR1	P36060	302 aa	Known RBP	0.08	□□□□□ -2.4
snR45	snR45	MRPL40	P36534	297 aa		0.08	□□□□□ -2.4
snR45	snR45	CST26	P38226	397 aa		0.08	□□□□□ -2.4
snR45	snR45	TRS20	P38334	175 aa		0.08	□□□□□ -2.4
snR45	snR45	VPS41	P38959	992 aa		0.08	□□□□□ -2.4
snR45	snR45	FET3	P38993	636 aa		0.08	□□□□□ -2.4
snR45	snR45	TIM17	P39515	158 aa		0.08	□□□□□ -2.4
snR45	snR45	FTR1	P40088	404 aa		0.08	□□□□□ -2.4
snR45	snR45	VID27	P40157	782 aa		0.08	□□□□□ -2.4
snR45	snR45	GAT2	P40209	560 aa		0.08	□□□□□ -2.4
snR45	snR45	YJL068C	P40363	299 aa		0.08	□□□□□ -2.4
snR45	snR45	VID28	P40547	921 aa		0.08	□□□□□ -2.4
snR45	snR45	DSN1	P40568	576 aa		0.08	□□□□□ -2.4
snR45	snR45	GAT4	P40569	121 aa		0.08	□□□□□ -2.4
snR45	snR45	ERG10	P41338	398 aa	Known RBP	0.08	□□□□□ -2.4
snR45	snR45	PXA1	P41909	870 aa		0.08	□□□□□ -2.4
snR45	snR45	YFH7	P43591	353 aa		0.08	□□□□□ -2.4
snR45	snR45	PMT4	P46971	762 aa		0.08	□□□□□ -2.4
snR45	snR45	AIM23	P47015	356 aa		0.08	□□□□□ -2.4
snR45	snR45	CTF18	P49956	741 aa		0.08	□□□□□ -2.4
snR45	snR45	ALT2	P52892	507 aa		0.08	□□□□□ -2.4
snR45	snR45	PEX14	P53112	341 aa		0.08	□□□□□ -2.4
snR45	snR45	SGF73	P53165	657 aa		0.08	□□□□□ -2.4
snR45	snR45	SOL4	P53315	255 aa		0.08	□□□□□ -2.4
snR45	snR45	YNL134C	P53912	376 aa	Known RBP	0.08	□□□□□ -2.4
snR45	snR45	AQR1	P53943	586 aa		0.08	□□□□□ -2.4
snR45	snR45	MTQ1	P53944	314 aa		0.08	□□□□□ -2.4
snR45	snR45	HEF3	P53978	1044 aa	Known RBP	0.08	□□□□□ -2.4
snR45	snR45	ASI1	P54074	624 aa		0.08	□□□□□ -2.4
snR45	snR45	GPD1	Q00055	391 aa	Known RBP	0.08	□□□□□ -2.4
snR45	snR45	YPL113C	Q02961	396 aa		0.08	□□□□□ -2.4
snR45	snR45	PPN1	Q04119	674 aa		0.08	□□□□□ -2.4
snR45	snR45	RCO1	Q04779	684 aa		0.08	□□□□□ -2.4
snR45	snR45	SPH1	Q06160	661 aa		0.08	□□□□□ -2.4
snR45	snR45	TFC6	Q06339	672 aa		0.08	□□□□□ -2.4
snR45	snR45	CDD1	Q06549	142 aa		0.08	□□□□□ -2.4
snR45	snR45	HIM1	Q06674	414 aa		0.08	□□□□□ -2.4
snR45	snR45	YCG1	Q06680	1035 aa		0.08	□□□□□ -2.4
snR45	snR45	THI73	Q07904	523 aa		0.08	□□□□□ -2.4
snR45	snR45	RPN8	Q08723	338 aa	Known RBP	0.08	□□□□□ -2.4
snR45	snR45	RAX1	Q08760	435 aa		0.08	□□□□□ -2.4
snR45	snR45	YOR387C	Q08910	206 aa		0.08	□□□□□ -2.4
snR45	snR45	YPQ1	Q12010	308 aa		0.08	□□□□□ -2.4
snR45	snR45	SRO7	Q12038	1033 aa		0.08	□□□□□ -2.4
snR45	snR45	SLX4	Q12098	748 aa		0.08	□□□□□ -2.4
snR45	snR45	RRP6	Q12149	733 aa	Known RBP	0.08	□□□□□ -2.4
snR45	snR45	YOR342C	Q12182	319 aa		0.08	□□□□□ -2.4
snR45	snR45	COX17	Q12287	69 aa		0.08	□□□□□ -2.4
snR45	snR45	GEP5	Q12393	293 aa		0.08	□□□□□ -2.4
snR45	snR45	YPR064W	Q12492	139 aa		0.08	□□□□□ -2.4
snR45	snR45	RLF2	Q12495	606 aa		0.08	□□□□□ -2.4
snR45	snR45	PCD1	Q12524	340 aa		0.08	□□□□□ -2.4
snR45	snR45	NAG1	Q8TGN9	163 aa		0.08	□□□□□ -2.4
snR45	snR45	FLO9	P39712	1322 aa		0.08	□□□□□ -2.4
snR45	snR45	YER145C-A	A0A023PYF4	145 aa		0.07	□□□□□ -2.4
snR45	snR45	ADE4	P04046	510 aa	Known RBP	0.07	□□□□□ -2.4
snR45	snR45	HAP2	P06774	265 aa		0.07	□□□□□ -2.4
snR45	snR45	GDH1	P07262	454 aa	Known RBP	0.07	□□□□□ -2.4
snR45	snR45	HMG1	P12683	1054 aa		0.07	□□□□□ -2.4
snR45	snR45	MTF1	P14908	341 aa	Known RBP	0.07	□□□□□ -2.4
snR45	snR45	CTA1	P15202	515 aa		0.07	□□□□□ -2.4
snR45	snR45	AMD1	P15274	810 aa	Known RBP	0.07	□□□□□ -2.4
snR45	snR45	OM45	P16547	393 aa		0.07	□□□□□ -2.4
snR45	snR45	KGD2	P19262	463 aa	Predicted RBP	0.07	□□□□□ -2.4
snR45	snR45	SAM2	P19358	384 aa	Known RBP	0.07	□□□□□ -2.4
snR45	snR45	URA4	P20051	364 aa		0.07	□□□□□ -2.4
snR45	snR45	UBC1	P21734	215 aa	Known RBP	0.07	□□□□□ -2.4
snR45	snR45	RSA4	P25382	515 aa	Known RBP	0.07	□□□□□ -2.4
snR45	snR45	YCR102C	P25608	368 aa		0.07	□□□□□ -2.4
snR45	snR45	POL4	P25615	582 aa		0.07	□□□□□ -2.4
snR45	snR45	NAM9	P27929	486 aa		0.07	□□□□□ -2.4

Retrieved 100 of 5,963 RNA–protein pairs in 39.7 ms