RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C SSC1P0CS90 654 aaKnown RBP7.04□□□□□ -1.28
UME1YPL139C MEI5P32489 222 aa7.04□□□□□ -1.28
UME1YPL139C SPP381P38282 291 aaPredicted RBP7.04□□□□□ -1.28
UME1YPL139C YER158CP40095 573 aa7.04□□□□□ -1.28
UME1YPL139C NNF1P47149 201 aa7.04□□□□□ -1.28
UME1YPL139C RIM21P48565 533 aa7.04□□□□□ -1.28
UME1YPL139C PRP31P49704 494 aaPredicted RBP7.04□□□□□ -1.28
UME1YPL139C COS12P53053 380 aa7.04□□□□□ -1.28
UME1YPL139C KTR5P53966 522 aaPredicted RBP7.04□□□□□ -1.28
UME1YPL139C SHR3Q02774 210 aa7.04□□□□□ -1.28
UME1YPL139C UTP13Q05946 817 aaKnown RBP7.04□□□□□ -1.28
UME1YPL139C RRP12Q12754 1228 aaKnown RBP7.04□□□□□ -1.28
UME1YPL139C HSH49Q99181 213 aaPredicted RBP7.04□□□□□ -1.28
UME1YPL139C ADH4P10127 382 aa7.03□□□□□ -1.28
UME1YPL139C MET8P15807 274 aa7.03□□□□□ -1.28
UME1YPL139C TRX2P22803 104 aaKnown RBP7.03□□□□□ -1.28
UME1YPL139C MSH1P25846 959 aa7.03□□□□□ -1.28
UME1YPL139C NUP120P35729 1037 aa7.03□□□□□ -1.28
UME1YPL139C GLY1P37303 387 aaKnown RBP7.03□□□□□ -1.28
UME1YPL139C OLA1P38219 394 aaKnown RBP7.03□□□□□ -1.28
UME1YPL139C TRM7P38238 310 aaKnown RBP7.03□□□□□ -1.28
UME1YPL139C YHR033WP38690 423 aa7.03□□□□□ -1.28
UME1YPL139C YHR127WP38833 243 aaKnown RBP7.03□□□□□ -1.28
UME1YPL139C YJR039WP47107 1121 aa7.03□□□□□ -1.28
UME1YPL139C URB2P47108 1174 aa7.03□□□□□ -1.28
UME1YPL139C VPS60Q03390 229 aa7.03□□□□□ -1.28
UME1YPL139C USA1Q03714 838 aa7.03□□□□□ -1.28
UME1YPL139C SPO20Q04359 397 aa7.03□□□□□ -1.28
UME1YPL139C FRA1Q07825 749 aa7.03□□□□□ -1.28
UME1YPL139C GUP2Q08929 609 aa7.03□□□□□ -1.28
UME1YPL139C CHS5Q12114 671 aaKnown RBP7.03□□□□□ -1.28
UME1YPL139C SUL2Q12325 893 aa7.03□□□□□ -1.28
UME1YPL139C TY4A-HQ6Q5P6 413 aa7.03□□□□□ -1.28
UME1YPL139C SEM1O94742 89 aa7.02□□□□□ -1.29
UME1YPL139C GCY1P14065 312 aaKnown RBP RIP-Chip data7.02□□□□□ -1.29not detected
UME1YPL139C PET309P32522 965 aaPredicted RBP7.02□□□□□ -1.29
UME1YPL139C DOM34P33309 386 aa7.02□□□□□ -1.29
UME1YPL139C SDH3P33421 198 aa7.02□□□□□ -1.29
UME1YPL139C YPT52P36018 234 aaKnown RBP7.02□□□□□ -1.29
UME1YPL139C NTR2P36118 322 aaPredicted RBP7.02□□□□□ -1.29
UME1YPL139C AZF1P41696 914 aa7.02□□□□□ -1.29
UME1YPL139C RNH70P53331 553 aa7.02□□□□□ -1.29
UME1YPL139C GRS2Q06817 618 aa7.02□□□□□ -1.29
UME1YPL139C VAM6Q07468 1049 aa7.02□□□□□ -1.29
UME1YPL139C APC9Q12107 265 aa7.02□□□□□ -1.29
UME1YPL139C CMR1Q12510 522 aaKnown RBP7.02□□□□□ -1.29
UME1YPL139C FUR1P18562 216 aaKnown RBP7.01□□□□□ -1.29
UME1YPL139C AMD2P22580 549 aa7.01□□□□□ -1.29
UME1YPL139C RIM1P32445 135 aaKnown RBP7.01□□□□□ -1.29
UME1YPL139C EMC3P36039 253 aa7.01□□□□□ -1.29
UME1YPL139C RPC37P36121 282 aa7.01□□□□□ -1.29
UME1YPL139C INM1P38710 295 aa7.01□□□□□ -1.29
UME1YPL139C YHR045WP38775 560 aa7.01□□□□□ -1.29
UME1YPL139C CCT2P39076 527 aaKnown RBP7.01□□□□□ -1.29
UME1YPL139C NPT1P39683 429 aaKnown RBP7.01□□□□□ -1.29
UME1YPL139C PEP8P40335 379 aa7.01□□□□□ -1.29
UME1YPL139C SEC27P41811 889 aaKnown RBP7.01□□□□□ -1.29
UME1YPL139C YGR015CP53208 328 aa7.01□□□□□ -1.29
UME1YPL139C CLD1P53264 445 aa7.01□□□□□ -1.29
UME1YPL139C TRS23Q03784 219 aa7.01□□□□□ -1.29
UME1YPL139C RIF2Q06208 395 aa7.01□□□□□ -1.29
UME1YPL139C YDR056CQ12025 205 aa7.01□□□□□ -1.29
UME1YPL139C YPR022CQ12139 1133 aa7.01□□□□□ -1.29
UME1YPL139C KCS1Q12494 1050 aa7.01□□□□□ -1.29
UME1YPL139C RGS2Q99188 309 aa7.01□□□□□ -1.29
UME1YPL139C KIN2P13186 1147 aaKnown RBP7□□□□□ -1.29
UME1YPL139C HOP1P20050 605 aa7□□□□□ -1.29
UME1YPL139C RPA135P22138 1203 aaKnown RBP7□□□□□ -1.29
UME1YPL139C AGP1P25376 633 aa7□□□□□ -1.29
UME1YPL139C YME1P32795 747 aa7□□□□□ -1.29
UME1YPL139C ASK1P35734 292 aa7□□□□□ -1.29
UME1YPL139C SPC97P38863 823 aa7□□□□□ -1.29
UME1YPL139C SSP120P39931 234 aaKnown RBP7□□□□□ -1.29
UME1YPL139C AIF1P52923 378 aa7□□□□□ -1.29
UME1YPL139C YPR109WQ06104 294 aa7□□□□□ -1.29
UME1YPL139C YLR177WQ06251 628 aa7□□□□□ -1.29
UME1YPL139C HAL9Q12180 1030 aa7□□□□□ -1.29
UME1YPL139C MDY2Q12285 212 aa7□□□□□ -1.29
UME1YPL139C GCN1P33892 2672 aaKnown RBP7□□□□□ -1.29
UME1YPL139C GUK1P15454 187 aaKnown RBP6.99□□□□□ -1.29
UME1YPL139C TYR1P20049 452 aa6.99□□□□□ -1.29
UME1YPL139C PRP2P20095 876 aaPredicted RBP6.99□□□□□ -1.29
UME1YPL139C ARG1P22768 420 aa6.99□□□□□ -1.29
UME1YPL139C YSC84P32793 468 aa6.99□□□□□ -1.29
UME1YPL139C RPS0AP32905 252 aaKnown RBP6.99□□□□□ -1.29
UME1YPL139C SQT1P35184 431 aa6.99□□□□□ -1.29
UME1YPL139C RRP14P36080 434 aaKnown RBP6.99□□□□□ -1.29
UME1YPL139C DHH1P39517 506 aaKnown RBP6.99□□□□□ -1.29
UME1YPL139C SAP1P39955 897 aaKnown RBP6.99□□□□□ -1.29
UME1YPL139C CEP3P40969 608 aa6.99□□□□□ -1.29
UME1YPL139C MPS2P53159 387 aa6.99□□□□□ -1.29
UME1YPL139C VHS1Q03785 461 aa6.99□□□□□ -1.29
UME1YPL139C YMR155WQ03795 547 aa6.99□□□□□ -1.29
UME1YPL139C MTQ2Q03920 221 aaPredicted RBP6.99□□□□□ -1.29
UME1YPL139C RRP45Q05636 305 aaKnown RBP6.99□□□□□ -1.29
UME1YPL139C DIC1Q06143 298 aa6.99□□□□□ -1.29
UME1YPL139C TDA5Q06417 326 aaKnown RBP6.99□□□□□ -1.29
UME1YPL139C DIN7Q12086 430 aa6.99□□□□□ -1.29
UME1YPL139C YOL107WQ12239 342 aa6.99□□□□□ -1.29
UME1YPL139C GLE1Q12315 538 aa6.99□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 31 ms