RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C UBP11P36026 717 aa4.3□□□□□ -1.72
RPN8YOR261C YJL068CP40363 299 aa4.3□□□□□ -1.72
RPN8YOR261C RPM2Q02773 1202 aa4.3□□□□□ -1.72
RPN8YOR261C RPC11Q04307 110 aaPredicted RBP4.3□□□□□ -1.72
RPN8YOR261C FMP40Q08968 688 aaPredicted RBP4.3□□□□□ -1.72
RPN8YOR261C YPT6Q99260 215 aa4.3□□□□□ -1.72
RPN8YOR261C PHO2P07269 559 aa4.29□□□□□ -1.72
RPN8YOR261C SEC53P07283 254 aaKnown RBP4.29□□□□□ -1.72
RPN8YOR261C YML002WP0CF17 737 aa4.29□□□□□ -1.72
RPN8YOR261C PEP5P12868 1029 aa4.29□□□□□ -1.72
RPN8YOR261C GFD2P25370 566 aaKnown RBP4.29□□□□□ -1.72
RPN8YOR261C NOP4P37838 685 aaKnown RBP4.29□□□□□ -1.72
RPN8YOR261C YTA12P40341 825 aa4.29□□□□□ -1.72
RPN8YOR261C SNG1P46950 547 aa4.29□□□□□ -1.72
RPN8YOR261C DRN1P53255 507 aaKnown RBP4.29□□□□□ -1.72
RPN8YOR261C YMR087WQ04299 284 aa4.29□□□□□ -1.72
RPN8YOR261C HCR1Q05775 265 aaKnown RBP4.29□□□□□ -1.72
RPN8YOR261C YTH1Q06102 208 aaPredicted RBP4.29□□□□□ -1.72
RPN8YOR261C ART10P18634 518 aaKnown RBP4.28□□□□□ -1.72
RPN8YOR261C VPS17P32913 551 aa4.28□□□□□ -1.72
RPN8YOR261C ECM15P35195 104 aa4.28□□□□□ -1.72
RPN8YOR261C TMA108P40462 946 aa4.28□□□□□ -1.72
RPN8YOR261C DSD1P53095 428 aa4.28□□□□□ -1.72
RPN8YOR261C BUD32P53323 261 aa4.28□□□□□ -1.72
RPN8YOR261C DUG3P53871 357 aa4.28□□□□□ -1.72
RPN8YOR261C CRZ1P53968 678 aa4.28□□□□□ -1.72
RPN8YOR261C CDC45Q08032 650 aa4.28□□□□□ -1.72
RPN8YOR261C SDH5Q08230 162 aa4.28□□□□□ -1.72
RPN8YOR261C PDA1P16387 420 aaKnown RBP4.27□□□□□ -1.73
RPN8YOR261C OLE1P21147 510 aaKnown RBP4.27□□□□□ -1.73
RPN8YOR261C YKL023WP36103 277 aaKnown RBP4.27□□□□□ -1.73
RPN8YOR261C RRP3P38712 501 aaKnown RBP4.27□□□□□ -1.73
RPN8YOR261C CIN4P39110 191 aa4.27□□□□□ -1.73
RPN8YOR261C DHH1P39517 506 aaKnown RBP4.27□□□□□ -1.73
RPN8YOR261C AFG3P39925 761 aa4.27□□□□□ -1.73
RPN8YOR261C MRX6P48564 524 aa4.27□□□□□ -1.73
RPN8YOR261C YGR126WP53274 230 aa4.27□□□□□ -1.73
RPN8YOR261C SHR3Q02774 210 aa4.27□□□□□ -1.73
RPN8YOR261C YOR365CQ08844 703 aa4.27□□□□□ -1.73
RPN8YOR261C TIP41Q12199 356 aa4.27□□□□□ -1.73
RPN8YOR261C PEP4P07267 405 aaKnown RBP4.26□□□□□ -1.73
RPN8YOR261C EST1P17214 699 aaPredicted RBP4.26□□□□□ -1.73
RPN8YOR261C SEC62P21825 274 aa4.26□□□□□ -1.73
RPN8YOR261C ELO2P25358 347 aa4.26□□□□□ -1.73
RPN8YOR261C LOS1P33418 1100 aaPredicted RBP4.26□□□□□ -1.73
RPN8YOR261C YHR210CP38893 341 aa4.26□□□□□ -1.73
RPN8YOR261C CSM2P40465 213 aa4.26□□□□□ -1.73
RPN8YOR261C SGN1P40561 250 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73not detected
RPN8YOR261C IKS1P47042 667 aa4.26□□□□□ -1.73
RPN8YOR261C GLO2Q05584 274 aa4.26□□□□□ -1.73
RPN8YOR261C YDL057WQ07379 328 aa4.26□□□□□ -1.73
RPN8YOR261C YDL121CQ07541 149 aa4.26□□□□□ -1.73
RPN8YOR261C CTI6Q08923 506 aa4.26□□□□□ -1.73
RPN8YOR261C YJR112W-AQ3E743 109 aa4.26□□□□□ -1.73
RPN8YOR261C SGF29P25554 259 aa4.25□□□□□ -1.73
RPN8YOR261C IMP2'P32351 346 aa4.25□□□□□ -1.73
RPN8YOR261C SIP2P34164 415 aaKnown RBP4.25□□□□□ -1.73
RPN8YOR261C SGS1P35187 1447 aa4.25□□□□□ -1.73
RPN8YOR261C YJR154WP47181 346 aa4.25□□□□□ -1.73
RPN8YOR261C ALT2P52892 507 aa4.25□□□□□ -1.73
RPN8YOR261C VID30P53076 958 aa4.25□□□□□ -1.73
RPN8YOR261C YGL082WP53155 381 aa4.25□□□□□ -1.73
RPN8YOR261C IPI3P53877 555 aa4.25□□□□□ -1.73
RPN8YOR261C RTT103Q05543 409 aa4.25□□□□□ -1.73
RPN8YOR261C COQ9Q05779 260 aa4.25□□□□□ -1.73
RPN8YOR261C IMH1Q06704 911 aaKnown RBP4.25□□□□□ -1.73
RPN8YOR261C SUC2P00724 532 aa4.24□□□□□ -1.73
RPN8YOR261C RPL15AP05748 204 aaKnown RBP4.24□□□□□ -1.73
RPN8YOR261C APE1P14904 514 aa4.24□□□□□ -1.73
RPN8YOR261C SEF1P34228 1148 aa4.24□□□□□ -1.73
RPN8YOR261C TCD2P36101 447 aaKnown RBP4.24□□□□□ -1.73
RPN8YOR261C OSH3P38713 996 aaKnown RBP4.24□□□□□ -1.73
RPN8YOR261C ALG5P40350 334 aa4.24□□□□□ -1.73
RPN8YOR261C BNA5Q05979 453 aa4.24□□□□□ -1.73
RPN8YOR261C RCN2Q12044 265 aa4.24□□□□□ -1.73
RPN8YOR261C YBR298C-AQ8TGK4 73 aa4.24□□□□□ -1.73
RPN8YOR261C RAD52P06778 471 aaKnown RBP4.23□□□□□ -1.73
RPN8YOR261C AMD1P15274 810 aaKnown RBP4.23□□□□□ -1.73
RPN8YOR261C ATS1P31386 333 aa4.23□□□□□ -1.73
RPN8YOR261C YNK1P36010 153 aaKnown RBP4.23□□□□□ -1.73
RPN8YOR261C VPS52P39904 641 aa4.23□□□□□ -1.73
RPN8YOR261C IMD4P50094 524 aaKnown RBP4.23□□□□□ -1.73
RPN8YOR261C ARE2P53629 642 aaKnown RBP4.23□□□□□ -1.73
RPN8YOR261C VPS75P53853 264 aa4.23□□□□□ -1.73
RPN8YOR261C TOF2Q02208 771 aa4.23□□□□□ -1.73
RPN8YOR261C VPS38Q05919 439 aa4.23□□□□□ -1.73
RPN8YOR261C SYO1Q07395 620 aa4.23□□□□□ -1.73
RPN8YOR261C HSH49Q99181 213 aaPredicted RBP4.23□□□□□ -1.73
RPN8YOR261C TOP1P04786 769 aa4.22□□□□□ -1.73
RPN8YOR261C CBS1P14066 229 aa4.22□□□□□ -1.73
RPN8YOR261C SUI2P20459 304 aaKnown RBP4.22□□□□□ -1.73
RPN8YOR261C PRO3P32263 286 aaKnown RBP4.22□□□□□ -1.73
RPN8YOR261C SHP1P34223 423 aa4.22□□□□□ -1.73
RPN8YOR261C MSR1P38714 643 aa4.22□□□□□ -1.73
RPN8YOR261C SLD5Q03406 294 aa4.22□□□□□ -1.73
RPN8YOR261C ERP1Q05359 219 aaKnown RBP4.22□□□□□ -1.73
RPN8YOR261C RLM1Q12224 676 aa4.22□□□□□ -1.73
RPN8YOR261C MET8P15807 274 aa4.21□□□□□ -1.74
RPN8YOR261C PEP3P27801 918 aa4.21□□□□□ -1.74
RPN8YOR261C NDC1P32500 655 aa4.21□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms