RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W PFK26P40433 827 aaKnown RBP1.96□□□□□ -2.1
HER1YOR227W SDP1P40479 209 aa1.96□□□□□ -2.1
HER1YOR227W TNA1P53322 534 aa1.96□□□□□ -2.1
HER1YOR227W CUZ1P53899 274 aa1.96□□□□□ -2.1
HER1YOR227W MAP1Q01662 387 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
HER1YOR227W CWC21Q03375 135 aaKnown RBP1.96□□□□□ -2.1
HER1YOR227W ADE13Q05911 482 aaKnown RBP1.96□□□□□ -2.1
HER1YOR227W YPR196WQ06595 470 aa1.96□□□□□ -2.1
HER1YOR227W YOL159CQ08300 171 aa1.96□□□□□ -2.1
HER1YOR227W TCO89Q08921 799 aa1.96□□□□□ -2.1
HER1YOR227W RLM1Q12224 676 aa1.96□□□□□ -2.1
HER1YOR227W LCB4Q12246 624 aa1.96□□□□□ -2.1
HER1YOR227W LDB17Q12342 491 aa1.96□□□□□ -2.1
HER1YOR227W CCH1P50077 2039 aa1.95□□□□□ -2.1
HER1YOR227W COX3P00420 269 aa1.95□□□□□ -2.1
HER1YOR227W RAS1P01119 309 aa1.95□□□□□ -2.1
HER1YOR227W PMA1P05030 918 aaKnown RBP1.95□□□□□ -2.1
HER1YOR227W TAL1P15019 335 aaKnown RBP1.95□□□□□ -2.1
HER1YOR227W UBA1P22515 1024 aaKnown RBP1.95□□□□□ -2.1
HER1YOR227W SSE1P32589 693 aaKnown RBP1.95□□□□□ -2.1
HER1YOR227W CMC1P36064 111 aa1.95□□□□□ -2.1
HER1YOR227W TCD2P36101 447 aaKnown RBP1.95□□□□□ -2.1
HER1YOR227W SLM4P38247 162 aa1.95□□□□□ -2.1
HER1YOR227W PEX18P38855 283 aa1.95□□□□□ -2.1
HER1YOR227W IME4P41833 600 aa1.95□□□□□ -2.1
HER1YOR227W DLD2P46681 530 aaKnown RBP1.95□□□□□ -2.1
HER1YOR227W PET130P47065 347 aa1.95□□□□□ -2.1
HER1YOR227W YGL185CP53100 379 aa1.95□□□□□ -2.1
HER1YOR227W ADA2Q02336 434 aa1.95□□□□□ -2.1
HER1YOR227W YML037CQ03703 340 aa1.95□□□□□ -2.1
HER1YOR227W SIZ1Q04195 904 aa1.95□□□□□ -2.1
HER1YOR227W DSE3Q08729 430 aa1.95□□□□□ -2.1
HER1YOR227W YPL277CQ08989 487 aa1.95□□□□□ -2.1
HER1YOR227W TGS1Q12052 315 aa1.95□□□□□ -2.1
HER1YOR227W HOS1Q12214 470 aa1.95□□□□□ -2.1
HER1YOR227W TDH1P00360 332 aaKnown RBP1.95□□□□□ -2.1
HER1YOR227W GPM1P00950 247 aaKnown RBP1.95□□□□□ -2.1
HER1YOR227W COX4P04037 155 aa1.95□□□□□ -2.1
HER1YOR227W YML002WP0CF17 737 aa1.95□□□□□ -2.1
HER1YOR227W MATALPHA2P0CY08 210 aa1.95□□□□□ -2.1
HER1YOR227W HMLALPHA2P0CY09 210 aa1.95□□□□□ -2.1
HER1YOR227W PCT1P13259 424 aa1.95□□□□□ -2.1
HER1YOR227W MBR1P23493 339 aa1.95□□□□□ -2.1
HER1YOR227W PGM1P33401 570 aaKnown RBP1.95□□□□□ -2.1
HER1YOR227W WSC4P38739 605 aa1.95□□□□□ -2.1
HER1YOR227W TVP23P38962 199 aa1.95□□□□□ -2.1
HER1YOR227W PXA1P41909 870 aa1.95□□□□□ -2.1
HER1YOR227W HOP2P53187 214 aa1.95□□□□□ -2.1
HER1YOR227W MDR1P53258 950 aa1.95□□□□□ -2.1
HER1YOR227W ASI2P53895 289 aa1.95□□□□□ -2.1
HER1YOR227W KAP120Q02932 1032 aa1.95□□□□□ -2.1
HER1YOR227W BOP2Q06150 570 aa1.95□□□□□ -2.1
HER1YOR227W ECM7Q06200 448 aa1.95□□□□□ -2.1
HER1YOR227W SYT1Q06836 1226 aa1.95□□□□□ -2.1
HER1YOR227W SMC5Q08204 1093 aa1.95□□□□□ -2.1
HER1YOR227W YOR223WQ12015 292 aa1.95□□□□□ -2.1
HER1YOR227W DAP1Q12091 152 aa1.95□□□□□ -2.1
HER1YOR227W TY1A-BLQ12266 440 aa1.95□□□□□ -2.1
HER1YOR227W YDR461C-AQ2V2P7 80 aa1.95□□□□□ -2.1
HER1YOR227W VPS63O13549 108 aa1.95□□□□□ -2.1
HER1YOR227W GAL80P04387 435 aa1.95□□□□□ -2.1
HER1YOR227W HXK2P04807 486 aaKnown RBP1.95□□□□□ -2.1
HER1YOR227W KRS1P15180 591 aaKnown RBP1.95□□□□□ -2.1
HER1YOR227W MER1P16523 270 aa1.95□□□□□ -2.1
HER1YOR227W SAG1P20840 650 aa1.95□□□□□ -2.1
HER1YOR227W RNR1P21524 888 aaKnown RBP1.95□□□□□ -2.1
HER1YOR227W RNR3P21672 869 aaKnown RBP1.95□□□□□ -2.1
HER1YOR227W SEC62P21825 274 aa1.95□□□□□ -2.1
HER1YOR227W YBL029WP38201 376 aa1.95□□□□□ -2.1
HER1YOR227W ERC1P38767 581 aa1.95□□□□□ -2.1
HER1YOR227W NUP60P39705 539 aa1.95□□□□□ -2.1
HER1YOR227W ZAP1P47043 880 aa1.95□□□□□ -2.1
HER1YOR227W TWF1P53250 332 aa1.95□□□□□ -2.1
HER1YOR227W OGG1P53397 376 aaPredicted RBP1.95□□□□□ -2.1
HER1YOR227W RET3P53600 189 aa1.95□□□□□ -2.1
HER1YOR227W ATG21Q02887 496 aa1.95□□□□□ -2.1
HER1YOR227W ACL4Q03771 387 aa1.95□□□□□ -2.1
HER1YOR227W TPP1Q03796 238 aa1.95□□□□□ -2.1
HER1YOR227W VPS64Q03944 604 aa1.95□□□□□ -2.1
HER1YOR227W URC2Q04411 772 aa1.95□□□□□ -2.1
HER1YOR227W ARG7Q04728 441 aa1.95□□□□□ -2.1
HER1YOR227W VPS38Q05919 439 aa1.95□□□□□ -2.1
HER1YOR227W NBP2Q12163 236 aa1.95□□□□□ -2.1
HER1YOR227W SLP1Q12232 587 aa1.95□□□□□ -2.1
HER1YOR227W PKH2Q12236 1081 aaKnown RBP1.95□□□□□ -2.1
HER1YOR227W NTO1Q12311 748 aa1.95□□□□□ -2.1
HER1YOR227W YOR012WQ12351 137 aa1.95□□□□□ -2.1
HER1YOR227W TY1A-NL1Q12391 440 aaKnown RBP1.95□□□□□ -2.1
HER1YOR227W CSF1Q12150 2958 aa1.95□□□□□ -2.1
HER1YOR227W CBP2P03874 630 aaPredicted RBP1.94□□□□□ -2.1
HER1YOR227W STE3P06783 470 aa1.94□□□□□ -2.1
HER1YOR227W YCR015CP25616 317 aa1.94□□□□□ -2.1
HER1YOR227W UTR4P32626 227 aa1.94□□□□□ -2.1
HER1YOR227W YME2P32843 850 aa1.94□□□□□ -2.1
HER1YOR227W MCX1P38323 520 aaPredicted RBP1.94□□□□□ -2.1
HER1YOR227W SAK1P38990 1142 aa1.94□□□□□ -2.1
HER1YOR227W URM1P40554 99 aaPredicted RBP1.94□□□□□ -2.1
HER1YOR227W GTS1P40956 396 aa1.94□□□□□ -2.1
HER1YOR227W MAF1P41910 395 aa1.94□□□□□ -2.1
HER1YOR227W KEL2P50090 882 aa1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms