RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C GCD10P41814 478 aa7.33□□□□□ -1.24
RUP1YOR138C GCD14P46959 383 aaPredicted RBP7.33□□□□□ -1.24
RUP1YOR138C YPT32P51996 222 aaKnown RBP7.33□□□□□ -1.24
RUP1YOR138C ORM1P53224 222 aa7.33□□□□□ -1.24
RUP1YOR138C SPR6Q01684 191 aa7.33□□□□□ -1.24
RUP1YOR138C PPN1Q04119 674 aa7.33□□□□□ -1.24
RUP1YOR138C GPB1Q08886 897 aa7.33□□□□□ -1.24
RUP1YOR138C FLC1Q08967 793 aa7.33□□□□□ -1.24
RUP1YOR138C YOL159C-AQ3E769 90 aa7.33□□□□□ -1.24
RUP1YOR138C MED11Q99278 115 aa7.33□□□□□ -1.24
RUP1YOR138C RPS9AO13516 197 aaKnown RBP7.32□□□□□ -1.24
RUP1YOR138C RAD7P06779 565 aa7.32□□□□□ -1.24
RUP1YOR138C DCC1P25559 380 aa7.32□□□□□ -1.24
RUP1YOR138C EMC1P25574 760 aa7.32□□□□□ -1.24
RUP1YOR138C FRE2P36033 711 aa7.32□□□□□ -1.24
RUP1YOR138C ADD66P36040 267 aa7.32□□□□□ -1.24
RUP1YOR138C CAF4P36130 643 aa7.32□□□□□ -1.24
RUP1YOR138C ACO2P39533 789 aa7.32□□□□□ -1.24
RUP1YOR138C PTR3P43606 678 aa7.32□□□□□ -1.24
RUP1YOR138C TRM112P53738 135 aaPredicted RBP7.32□□□□□ -1.24
RUP1YOR138C BRE5P53741 515 aaKnown RBP7.32□□□□□ -1.24
RUP1YOR138C COG5P53951 403 aa7.32□□□□□ -1.24
RUP1YOR138C RSC9Q03124 581 aa7.32□□□□□ -1.24
RUP1YOR138C YLR413WQ06689 675 aa7.32□□□□□ -1.24
RUP1YOR138C PKH2Q12236 1081 aaKnown RBP7.32□□□□□ -1.24
RUP1YOR138C SVS1Q12254 260 aa7.32□□□□□ -1.24
RUP1YOR138C RPN6Q12377 434 aa7.32□□□□□ -1.24
RUP1YOR138C ICT1Q12385 394 aa7.32□□□□□ -1.24
RUP1YOR138C RBK1P25332 333 aa7.32□□□□□ -1.24
RUP1YOR138C PPZ1P26570 692 aa7.32□□□□□ -1.24
RUP1YOR138C RPC82P32349 654 aa7.32□□□□□ -1.24
RUP1YOR138C IMP3P32899 183 aaPredicted RBP7.32□□□□□ -1.24
RUP1YOR138C VMA22P38784 181 aa7.32□□□□□ -1.24
RUP1YOR138C ARF3P40994 183 aaRIP-Chip data7.32□□□□□ -1.24not detected
RUP1YOR138C GTO1P48239 356 aa7.32□□□□□ -1.24
RUP1YOR138C IMD4P50094 524 aaKnown RBP7.32□□□□□ -1.24
RUP1YOR138C SLD3P53135 668 aa7.32□□□□□ -1.24
RUP1YOR138C SWP1Q02795 286 aa7.32□□□□□ -1.24
RUP1YOR138C VTA1Q06263 330 aa7.32□□□□□ -1.24
RUP1YOR138C SWA2Q06677 668 aa7.32□□□□□ -1.24
RUP1YOR138C YDL121CQ07541 149 aa7.32□□□□□ -1.24
RUP1YOR138C PUS7Q08647 676 aaKnown RBP7.32□□□□□ -1.24
RUP1YOR138C JLP1Q12358 412 aa7.32□□□□□ -1.24
RUP1YOR138C PRC1P00729 532 aa7.31□□□□□ -1.24
RUP1YOR138C GPH1P06738 902 aaKnown RBP7.31□□□□□ -1.24
RUP1YOR138C THR1P17423 357 aaKnown RBP7.31□□□□□ -1.24
RUP1YOR138C CMK1P27466 446 aaKnown RBP7.31□□□□□ -1.24
RUP1YOR138C APE2P32454 952 aaKnown RBP7.31□□□□□ -1.24
RUP1YOR138C PRP21P32524 280 aaPredicted RBP7.31□□□□□ -1.24
RUP1YOR138C FUI1P38196 639 aa7.31□□□□□ -1.24
RUP1YOR138C FHL1P39521 936 aa7.31□□□□□ -1.24
RUP1YOR138C TES1P41903 349 aaKnown RBP7.31□□□□□ -1.24
RUP1YOR138C NUP85P46673 744 aa7.31□□□□□ -1.24
RUP1YOR138C SPP2Q02521 185 aa7.31□□□□□ -1.24
RUP1YOR138C ERB1Q04660 807 aaKnown RBP7.31□□□□□ -1.24
RUP1YOR138C BCH1Q05029 724 aa7.31□□□□□ -1.24
RUP1YOR138C HEL2Q05580 639 aaKnown RBP7.31□□□□□ -1.24
RUP1YOR138C VAM6Q07468 1049 aa7.31□□□□□ -1.24
RUP1YOR138C HAA1Q12753 694 aaKnown RBP7.31□□□□□ -1.24
RUP1YOR138C YKL018C-AQ3E7A7 99 aa7.31□□□□□ -1.24
RUP1YOR138C RAS2P01120 322 aaKnown RBP7.3□□□□□ -1.24
RUP1YOR138C DST1P07273 309 aa7.3□□□□□ -1.24
RUP1YOR138C ECM8P38246 354 aa7.3□□□□□ -1.24
RUP1YOR138C SRP72P38688 640 aaKnown RBP7.3□□□□□ -1.24
RUP1YOR138C YHR078WP38799 552 aa7.3□□□□□ -1.24
RUP1YOR138C ALD5P40047 520 aaKnown RBP7.3□□□□□ -1.24
RUP1YOR138C ALG8P40351 577 aa7.3□□□□□ -1.24
RUP1YOR138C STR3P53101 465 aaKnown RBP7.3□□□□□ -1.24
RUP1YOR138C YNR068CP53754 272 aa7.3□□□□□ -1.24
RUP1YOR138C RCF1Q03713 159 aa7.3□□□□□ -1.24
RUP1YOR138C PLP1Q04004 230 aa7.3□□□□□ -1.24
RUP1YOR138C MRX10Q05648 414 aa7.3□□□□□ -1.24
RUP1YOR138C THP3Q12049 470 aaKnown RBP7.3□□□□□ -1.24
RUP1YOR138C GLE1Q12315 538 aa7.3□□□□□ -1.24
RUP1YOR138C MHF2Q3E829 80 aa7.3□□□□□ -1.24
RUP1YOR138C SFP1P32432 683 aa7.3□□□□□ -1.24
RUP1YOR138C MF(ALPHA)2P32435 120 aa7.3□□□□□ -1.24
RUP1YOR138C SIF2P38262 535 aa7.3□□□□□ -1.24
RUP1YOR138C MEP2P41948 499 aa7.3□□□□□ -1.24
RUP1YOR138C PML39Q03760 334 aa7.3□□□□□ -1.24
RUP1YOR138C MRN1Q08925 612 aaKnown RBP RIP-Chip data7.3□□□□□ -1.24not detected
RUP1YOR138C YOR131CQ12486 218 aa7.3□□□□□ -1.24
RUP1YOR138C MHF1Q3E835 90 aa7.3□□□□□ -1.24
RUP1YOR138C FRT1Q99332 602 aa7.3□□□□□ -1.24
RUP1YOR138C HXK2P04807 486 aaKnown RBP7.29□□□□□ -1.24
RUP1YOR138C HTA2P04912 132 aa7.29□□□□□ -1.24
RUP1YOR138C TVP23P38962 199 aa7.29□□□□□ -1.24
RUP1YOR138C YAR028WP39548 234 aa7.29□□□□□ -1.24
RUP1YOR138C IST3P40565 148 aaPredicted RBP7.29□□□□□ -1.24
RUP1YOR138C FAR7P43592 221 aa7.29□□□□□ -1.24
RUP1YOR138C PSP1P50896 841 aaKnown RBP7.29□□□□□ -1.24
RUP1YOR138C GCN5Q03330 439 aa7.29□□□□□ -1.24
RUP1YOR138C URC2Q04411 772 aa7.29□□□□□ -1.24
RUP1YOR138C YMR111CQ04461 462 aaPredicted RBP7.29□□□□□ -1.24
RUP1YOR138C ARP10Q04549 284 aa7.29□□□□□ -1.24
RUP1YOR138C ECM22Q05958 814 aaPredicted RBP7.29□□□□□ -1.24
RUP1YOR138C UIP4Q08926 304 aa7.29□□□□□ -1.24
RUP1YOR138C SNF8Q12483 233 aa7.29□□□□□ -1.24
RUP1YOR138C YLR149CQ99296 730 aa7.29□□□□□ -1.24
RUP1YOR138C SDH2P21801 266 aa7.28□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms