RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C YPT6Q99260 215 aa2.53□□□□□ -2
RPB11YOL005C GCN4P03069 281 aa2.52□□□□□ -2.01
RPB11YOL005C GAL80P04387 435 aa2.52□□□□□ -2.01
RPB11YOL005C ART10P18634 518 aaKnown RBP2.52□□□□□ -2.01
RPB11YOL005C SEC62P21825 274 aa2.52□□□□□ -2.01
RPB11YOL005C BUD5P25300 642 aaPredicted RBP2.52□□□□□ -2.01
RPB11YOL005C ACH1P32316 526 aa2.52□□□□□ -2.01
RPB11YOL005C ERG1P32476 496 aaKnown RBP2.52□□□□□ -2.01
RPB11YOL005C YME1P32795 747 aa2.52□□□□□ -2.01
RPB11YOL005C TIF3P34167 436 aaKnown RBP2.52□□□□□ -2.01
RPB11YOL005C YKL023WP36103 277 aaKnown RBP2.52□□□□□ -2.01
RPB11YOL005C CIN4P39110 191 aa2.52□□□□□ -2.01
RPB11YOL005C YAT2P40017 923 aa2.52□□□□□ -2.01
RPB11YOL005C YIR014WP40570 242 aa2.52□□□□□ -2.01
RPB11YOL005C MEP2P41948 499 aa2.52□□□□□ -2.01
RPB11YOL005C PYK2P52489 506 aaKnown RBP2.52□□□□□ -2.01
RPB11YOL005C TIM10P87108 93 aa2.52□□□□□ -2.01
RPB11YOL005C MFB1Q04922 465 aa2.52□□□□□ -2.01
RPB11YOL005C GLO2Q05584 274 aa2.52□□□□□ -2.01
RPB11YOL005C VPS38Q05919 439 aa2.52□□□□□ -2.01
RPB11YOL005C PDH1Q12428 516 aaKnown RBP2.52□□□□□ -2.01
RPB11YOL005C DNA2P38859 1522 aa2.52□□□□□ -2.01
RPB11YOL005C MET8P15807 274 aa2.51□□□□□ -2.01
RPB11YOL005C TYR1P20049 452 aa2.51□□□□□ -2.01
RPB11YOL005C OLE1P21147 510 aaKnown RBP2.51□□□□□ -2.01
RPB11YOL005C PPZ1P26570 692 aa2.51□□□□□ -2.01
RPB11YOL005C SWE1P32944 819 aa2.51□□□□□ -2.01
RPB11YOL005C RIM2P38127 377 aa2.51□□□□□ -2.01
RPB11YOL005C YBR225WP38321 900 aa2.51□□□□□ -2.01
RPB11YOL005C CCT6P39079 546 aa2.51□□□□□ -2.01
RPB11YOL005C YGR066CP53242 292 aa2.51□□□□□ -2.01
RPB11YOL005C BUD32P53323 261 aa2.51□□□□□ -2.01
RPB11YOL005C VPS75P53853 264 aa2.51□□□□□ -2.01
RPB11YOL005C VPS72Q03388 795 aa2.51□□□□□ -2.01
RPB11YOL005C YDR239CQ03780 787 aa2.51□□□□□ -2.01
RPB11YOL005C RBA50Q04418 439 aa2.51□□□□□ -2.01
RPB11YOL005C COQ9Q05779 260 aa2.51□□□□□ -2.01
RPB11YOL005C SDH5Q08230 162 aa2.51□□□□□ -2.01
RPB11YOL005C ETT1Q08421 412 aaKnown RBP2.51□□□□□ -2.01
RPB11YOL005C YPL272CQ08984 517 aa2.51□□□□□ -2.01
RPB11YOL005C RLM1Q12224 676 aa2.51□□□□□ -2.01
RPB11YOL005C ARP6Q12509 438 aa2.51□□□□□ -2.01
RPB11YOL005C HSH49Q99181 213 aaPredicted RBP2.51□□□□□ -2.01
RPB11YOL005C YML133CQ03099 1374 aa2.5□□□□□ -2.01
RPB11YOL005C YLL067CQ07888 1374 aa2.5□□□□□ -2.01
RPB11YOL005C YLL066CQ99208 1374 aa2.5□□□□□ -2.01
RPB11YOL005C FOB1O13329 566 aa2.5□□□□□ -2.01
RPB11YOL005C PEP5P12868 1029 aa2.5□□□□□ -2.01
RPB11YOL005C RPS2P25443 254 aaKnown RBP2.5□□□□□ -2.01
RPB11YOL005C RPN12P32496 274 aa2.5□□□□□ -2.01
RPB11YOL005C VPS17P32913 551 aa2.5□□□□□ -2.01
RPB11YOL005C TCD2P36101 447 aaKnown RBP2.5□□□□□ -2.01
RPB11YOL005C NAB3P38996 802 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01 RIP-Chip
RPB11YOL005C NDE1P40215 560 aa2.5□□□□□ -2.01
RPB11YOL005C IKS1P47042 667 aa2.5□□□□□ -2.01
RPB11YOL005C APT1P49435 187 aaKnown RBP2.5□□□□□ -2.01
RPB11YOL005C YGL260WP53056 76 aa2.5□□□□□ -2.01
RPB11YOL005C CUL3P53202 744 aa2.5□□□□□ -2.01
RPB11YOL005C ARE2P53629 642 aaKnown RBP2.5□□□□□ -2.01
RPB11YOL005C MSC1Q03104 513 aa2.5□□□□□ -2.01
RPB11YOL005C THP1Q08231 455 aa2.5□□□□□ -2.01
RPB11YOL005C MED1Q12321 566 aa2.5□□□□□ -2.01
RPB11YOL005C RRI2Q12348 645 aa2.5□□□□□ -2.01
RPB11YOL005C AVL9Q12500 764 aa2.5□□□□□ -2.01
RPB11YOL005C YJR112W-AQ3E743 109 aa2.5□□□□□ -2.01
RPB11YOL005C INH1P01097 85 aa2.49□□□□□ -2.01
RPB11YOL005C ARG3P05150 338 aa2.49□□□□□ -2.01
RPB11YOL005C OCA4P25366 362 aa2.49□□□□□ -2.01
RPB11YOL005C PAP1P29468 568 aaKnown RBP2.49□□□□□ -2.01
RPB11YOL005C PRO3P32263 286 aaKnown RBP2.49□□□□□ -2.01
RPB11YOL005C IMP2'P32351 346 aa2.49□□□□□ -2.01
RPB11YOL005C CST26P38226 397 aa2.49□□□□□ -2.01
RPB11YOL005C MSR1P38714 643 aa2.49□□□□□ -2.01
RPB11YOL005C ERP2P39704 215 aa2.49□□□□□ -2.01
RPB11YOL005C STB2P46679 850 aa2.49□□□□□ -2.01
RPB11YOL005C CAF130P53280 1122 aaPredicted RBP2.49□□□□□ -2.01
RPB11YOL005C SAM50P53969 484 aa2.49□□□□□ -2.01
RPB11YOL005C TOF2Q02208 771 aa2.49□□□□□ -2.01
RPB11YOL005C RPC11Q04307 110 aaPredicted RBP2.49□□□□□ -2.01
RPB11YOL005C COG4Q06096 861 aa2.49□□□□□ -2.01
RPB11YOL005C YEH2Q07950 538 aa2.49□□□□□ -2.01
RPB11YOL005C NDD1Q08887 554 aa2.49□□□□□ -2.01
RPB11YOL005C CAR1P00812 333 aaKnown RBP2.48□□□□□ -2.01
RPB11YOL005C MRP7P12687 371 aa2.48□□□□□ -2.01
RPB11YOL005C APE1P14904 514 aa2.48□□□□□ -2.01
RPB11YOL005C SHP1P34223 423 aa2.48□□□□□ -2.01
RPB11YOL005C ECM15P35195 104 aa2.48□□□□□ -2.01
RPB11YOL005C SPC34P36131 295 aa2.48□□□□□ -2.01
RPB11YOL005C BNA4P38169 460 aa2.48□□□□□ -2.01
RPB11YOL005C RTT107P38850 1070 aa2.48□□□□□ -2.01
RPB11YOL005C NPR2P39923 615 aa2.48□□□□□ -2.01
RPB11YOL005C YER130CP39959 443 aa2.48□□□□□ -2.01
RPB11YOL005C SPO22P40511 975 aa2.48□□□□□ -2.01
RPB11YOL005C ARF3P40994 183 aaRIP-Chip data2.48□□□□□ -2.01 RIP-Chip
RPB11YOL005C GUF1P46943 645 aa2.48□□□□□ -2.01
RPB11YOL005C PET130P47065 347 aa2.48□□□□□ -2.01
RPB11YOL005C CRZ1P53968 678 aa2.48□□□□□ -2.01
RPB11YOL005C RHO4Q00246 291 aa2.48□□□□□ -2.01
RPB11YOL005C TSR2Q06672 205 aaKnown RBP2.48□□□□□ -2.01
RPB11YOL005C SWR1Q05471 1514 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms