RNA–Protein interactions for RNA: YNL304W

YPT11, Transcript of Rab GTPase, yeastyeast

Gene YPT11, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT11YNL304W GAT1P43574 510 aa8.07□□□□□ -1.12
YPT11YNL304W YJR154WP47181 346 aa8.07□□□□□ -1.12
YPT11YNL304W MTR3P48240 250 aaPredicted RBP8.07□□□□□ -1.12
YPT11YNL304W MDM34P53083 459 aa8.07□□□□□ -1.12
YPT11YNL304W USE1P53146 245 aa8.07□□□□□ -1.12
YPT11YNL304W MPS2P53159 387 aa8.07□□□□□ -1.12
YPT11YNL304W YGR053CP53234 283 aa8.07□□□□□ -1.12
YPT11YNL304W SNO2P53823 222 aa8.07□□□□□ -1.12
YPT11YNL304W SGT1Q08446 395 aa8.07□□□□□ -1.12
YPT11YNL304W DIA2Q08496 732 aaPredicted RBP8.07□□□□□ -1.12
YPT11YNL304W DBR1P24309 405 aaKnown RBP8.06□□□□□ -1.12
YPT11YNL304W DGR2P32330 852 aa8.06□□□□□ -1.12
YPT11YNL304W SDH3P33421 198 aa8.06□□□□□ -1.12
YPT11YNL304W SIP2P34164 415 aaKnown RBP8.06□□□□□ -1.12
YPT11YNL304W YHR127WP38833 243 aaKnown RBP8.06□□□□□ -1.12
YPT11YNL304W GCD10P41814 478 aa8.06□□□□□ -1.12
YPT11YNL304W PFA3P42836 336 aa8.06□□□□□ -1.12
YPT11YNL304W YJR149WP47177 404 aa8.06□□□□□ -1.12
YPT11YNL304W TIS11P47977 285 aa8.06□□□□□ -1.12
YPT11YNL304W MTO1P53070 669 aa8.06□□□□□ -1.12
YPT11YNL304W YGR015CP53208 328 aa8.06□□□□□ -1.12
YPT11YNL304W BCP1Q06338 283 aa8.06□□□□□ -1.12
YPT11YNL304W PLB3Q08108 686 aa8.06□□□□□ -1.12
YPT11YNL304W UAF30Q08747 228 aa8.06□□□□□ -1.12
YPT11YNL304W NAG1Q8TGN9 163 aa8.06□□□□□ -1.12
YPT11YNL304W YOL087CQ99247 1116 aa8.06□□□□□ -1.12
YPT11YNL304W COX3P00420 269 aa8.05□□□□□ -1.12
YPT11YNL304W PHO5P00635 467 aa8.05□□□□□ -1.12
YPT11YNL304W AI3P03877 415 aa8.05□□□□□ -1.12
YPT11YNL304W STE3P06783 470 aa8.05□□□□□ -1.12
YPT11YNL304W GBP2P25555 427 aaKnown RBP RIP-Chip data8.05□□□□□ -1.12not detected
YPT11YNL304W RML2P32611 393 aa8.05□□□□□ -1.12
YPT11YNL304W DEF1P35732 738 aaKnown RBP8.05□□□□□ -1.12
YPT11YNL304W YBL029WP38201 376 aa8.05□□□□□ -1.12
YPT11YNL304W INM1P38710 295 aa8.05□□□□□ -1.12
YPT11YNL304W YEL073CP39974 107 aa8.05□□□□□ -1.12
YPT11YNL304W MET18P40469 1032 aa8.05□□□□□ -1.12
YPT11YNL304W YJR030CP47101 745 aa8.05□□□□□ -1.12
YPT11YNL304W DAN4P47179 1161 aa8.05□□□□□ -1.12
YPT11YNL304W MIG2P53035 382 aa8.05□□□□□ -1.12
YPT11YNL304W COG2P53271 262 aa8.05□□□□□ -1.12
YPT11YNL304W ARC35P53731 342 aaKnown RBP8.05□□□□□ -1.12
YPT11YNL304W CWC24P53769 259 aa8.05□□□□□ -1.12
YPT11YNL304W GAS3Q03655 524 aa8.05□□□□□ -1.12
YPT11YNL304W IOC2Q12072 812 aa8.05□□□□□ -1.12
YPT11YNL304W ATG29Q12092 213 aa8.05□□□□□ -1.12
YPT11YNL304W HUA2Q12134 243 aa8.05□□□□□ -1.12
YPT11YNL304W YPR011CQ12251 326 aa8.05□□□□□ -1.12
YPT11YNL304W RGT2Q12300 763 aa8.05□□□□□ -1.12
YPT11YNL304W PST1Q12355 444 aa8.05□□□□□ -1.12
YPT11YNL304W CMR1Q12510 522 aaKnown RBP8.05□□□□□ -1.12
YPT11YNL304W MDM35O60200 86 aa8.04□□□□□ -1.12
YPT11YNL304W SPT3P06844 337 aa8.04□□□□□ -1.12
YPT11YNL304W ARD1P07347 238 aaPredicted RBP8.04□□□□□ -1.12
YPT11YNL304W ZIP1P31111 875 aa8.04□□□□□ -1.12
YPT11YNL304W SLX5P32828 619 aaKnown RBP8.04□□□□□ -1.12
YPT11YNL304W PTC1P35182 281 aa8.04□□□□□ -1.12
YPT11YNL304W VPS21P36017 210 aaKnown RBP8.04□□□□□ -1.12
YPT11YNL304W SRX1P36077 127 aa8.04□□□□□ -1.12
YPT11YNL304W BMT2P38278 337 aa8.04□□□□□ -1.12
YPT11YNL304W TSC10P38342 320 aa8.04□□□□□ -1.12
YPT11YNL304W TRM5P38793 499 aa8.04□□□□□ -1.12
YPT11YNL304W PCF11P39081 626 aaPredicted RBP8.04□□□□□ -1.12
YPT11YNL304W NDE1P40215 560 aa8.04□□□□□ -1.12
YPT11YNL304W MPS3P47069 682 aa8.04□□□□□ -1.12
YPT11YNL304W GTO1P48239 356 aa8.04□□□□□ -1.12
YPT11YNL304W YPT32P51996 222 aaKnown RBP8.04□□□□□ -1.12
YPT11YNL304W PRP38Q00723 242 aaPredicted RBP8.04□□□□□ -1.12
YPT11YNL304W VHS1Q03785 461 aa8.04□□□□□ -1.12
YPT11YNL304W YET2Q04210 160 aa8.04□□□□□ -1.12
YPT11YNL304W YML053CQ04978 212 aa8.04□□□□□ -1.12
YPT11YNL304W YMR034CQ05131 434 aaPredicted RBP8.04□□□□□ -1.12
YPT11YNL304W YEH2Q07950 538 aa8.04□□□□□ -1.12
YPT11YNL304W GPB1Q08886 897 aa8.04□□□□□ -1.12
YPT11YNL304W YPR202WQ08993 238 aa8.04□□□□□ -1.12
YPT11YNL304W NSL1Q12143 216 aa8.04□□□□□ -1.12
YPT11YNL304W TUB1P09733 447 aaKnown RBP8.03□□□□□ -1.12
YPT11YNL304W RED1P14291 827 aa8.03□□□□□ -1.12
YPT11YNL304W PDC5P16467 563 aaKnown RBP8.03□□□□□ -1.12
YPT11YNL304W CLN2P20438 545 aa8.03□□□□□ -1.12
YPT11YNL304W YCK2P23292 546 aaKnown RBP8.03□□□□□ -1.12
YPT11YNL304W YSR3P23501 404 aa8.03□□□□□ -1.12
YPT11YNL304W GFD2P25370 566 aaKnown RBP8.03□□□□□ -1.12
YPT11YNL304W CAF4P36130 643 aa8.03□□□□□ -1.12
YPT11YNL304W YCR087C-AP37263 153 aa8.03□□□□□ -1.12
YPT11YNL304W TIF34P40217 347 aaKnown RBP8.03□□□□□ -1.12
YPT11YNL304W GCV1P48015 400 aa8.03□□□□□ -1.12
YPT11YNL304W NAS6P50086 228 aa8.03□□□□□ -1.12
YPT11YNL304W IMA1P53051 589 aa8.03□□□□□ -1.12
YPT11YNL304W YNL140CP53910 189 aa8.03□□□□□ -1.12
YPT11YNL304W YDR476CQ03362 224 aa8.03□□□□□ -1.12
YPT11YNL304W RAD34Q06665 692 aa8.03□□□□□ -1.12
YPT11YNL304W YIG1Q08956 461 aa8.03□□□□□ -1.12
YPT11YNL304W YCL012CQ8J0M4 134 aa8.03□□□□□ -1.12
YPT11YNL304W ATP7P30902 174 aa8.02□□□□□ -1.13
YPT11YNL304W MLS1P30952 554 aa8.02□□□□□ -1.13
YPT11YNL304W DED81P38707 554 aaKnown RBP8.02□□□□□ -1.13
YPT11YNL304W YPT35P38815 214 aaKnown RBP8.02□□□□□ -1.13
YPT11YNL304W GIP4P39732 760 aa8.02□□□□□ -1.13
YPT11YNL304W ALG5P40350 334 aa8.02□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms