RNA–Protein interactions for RNA: YNL289W

PCL1, Transcript of Cyclin, interacts with cyclin-dependent kinase Pho85p, yeast

Gene PCL1, Length 840 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCL1	YNL289W	PXL1	P36166	706 aa		4.96	□□□□□ -1.62
PCL1	YNL289W	EXO84	P38261	753 aa		4.96	□□□□□ -1.62
PCL1	YNL289W	YER130C	P39959	443 aa		4.96	□□□□□ -1.62
PCL1	YNL289W	YFL040W	P43562	540 aa		4.96	□□□□□ -1.62
PCL1	YNL289W	MDV1	P47025	714 aa		4.96	□□□□□ -1.62
PCL1	YNL289W	YPT11	P48559	417 aa		4.96	□□□□□ -1.62
PCL1	YNL289W	RPL4B	P49626	362 aa	Known RBP	4.96	□□□□□ -1.62
PCL1	YNL289W	RTT102	P53330	157 aa		4.96	□□□□□ -1.62
PCL1	YNL289W	HST1	P53685	503 aa		4.96	□□□□□ -1.62
PCL1	YNL289W	YNL146W	P53906	100 aa		4.96	□□□□□ -1.62
PCL1	YNL289W	TDA9	Q04545	1251 aa		4.96	□□□□□ -1.62
PCL1	YNL289W	ECM22	Q05958	814 aa	Predicted RBP	4.96	□□□□□ -1.62
PCL1	YNL289W	SMC5	Q08204	1093 aa		4.96	□□□□□ -1.62
PCL1	YNL289W	YOL075C	Q08234	1294 aa		4.96	□□□□□ -1.62
PCL1	YNL289W	IES4	Q08561	116 aa		4.96	□□□□□ -1.62
PCL1	YNL289W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
PCL1	YNL289W	PHO81	P17442	1178 aa		4.95	□□□□□ -1.62
PCL1	YNL289W	CKA2	P19454	339 aa		4.95	□□□□□ -1.62
PCL1	YNL289W	BMH1	P29311	267 aa	Known RBP	4.95	□□□□□ -1.62
PCL1	YNL289W	RFT1	P38206	574 aa	Predicted RBP	4.95	□□□□□ -1.62
PCL1	YNL289W	VID24	P38263	362 aa		4.95	□□□□□ -1.62
PCL1	YNL289W	NBP1	P52919	319 aa	Predicted RBP	4.95	□□□□□ -1.62
PCL1	YNL289W	MNP1	P53163	194 aa	Predicted RBP	4.95	□□□□□ -1.62
PCL1	YNL289W	ARC35	P53731	342 aa	Known RBP	4.95	□□□□□ -1.62
PCL1	YNL289W	RTC4	P53850	401 aa		4.95	□□□□□ -1.62
PCL1	YNL289W	PIG1	Q06216	648 aa		4.95	□□□□□ -1.62
PCL1	YNL289W	ATG23	Q06671	453 aa		4.95	□□□□□ -1.62
PCL1	YNL289W	MCH4	Q08268	501 aa		4.95	□□□□□ -1.62
PCL1	YNL289W	GPA1	P08539	472 aa		4.94	□□□□□ -1.62
PCL1	YNL289W	YSC83	P32792	385 aa		4.94	□□□□□ -1.62
PCL1	YNL289W	ATO2	P32907	282 aa		4.94	□□□□□ -1.62
PCL1	YNL289W	ALD5	P40047	520 aa	Known RBP	4.94	□□□□□ -1.62
PCL1	YNL289W	YIR016W	P40572	265 aa		4.94	□□□□□ -1.62
PCL1	YNL289W	CUL3	P53202	744 aa		4.94	□□□□□ -1.62
PCL1	YNL289W	CAF130	P53280	1122 aa	Predicted RBP	4.94	□□□□□ -1.62
PCL1	YNL289W	YNL144C	P53907	740 aa		4.94	□□□□□ -1.62
PCL1	YNL289W	UBX4	P54730	416 aa		4.94	□□□□□ -1.62
PCL1	YNL289W	PNG1	Q02890	363 aa		4.94	□□□□□ -1.62
PCL1	YNL289W	EMI2	Q04409	500 aa	Known RBP	4.94	□□□□□ -1.62
PCL1	YNL289W	LSP1	Q12230	341 aa	Known RBP	4.94	□□□□□ -1.62
PCL1	YNL289W	YER145C-A	A0A023PYF4	145 aa		4.93	□□□□□ -1.62
PCL1	YNL289W	FOB1	O13329	566 aa		4.93	□□□□□ -1.62
PCL1	YNL289W	GLN3	P18494	730 aa		4.93	□□□□□ -1.62
PCL1	YNL289W	RPC53	P25441	422 aa		4.93	□□□□□ -1.62
PCL1	YNL289W	YCL049C	P25577	312 aa		4.93	□□□□□ -1.62
PCL1	YNL289W	PSO2	P30620	661 aa		4.93	□□□□□ -1.62
PCL1	YNL289W	SAC6	P32599	642 aa	Known RBP	4.93	□□□□□ -1.62
PCL1	YNL289W	COT1	P32798	439 aa		4.93	□□□□□ -1.62
PCL1	YNL289W	SCO2	P38072	301 aa		4.93	□□□□□ -1.62
PCL1	YNL289W	YIL152W	P40455	235 aa		4.93	□□□□□ -1.62
PCL1	YNL289W	HYR1	P40581	163 aa	Known RBP	4.93	□□□□□ -1.62
PCL1	YNL289W	TOS3	P43637	560 aa		4.93	□□□□□ -1.62
PCL1	YNL289W	YGL036W	P53185	909 aa	Predicted RBP	4.93	□□□□□ -1.62
PCL1	YNL289W	TLG2	Q08144	397 aa		4.93	□□□□□ -1.62
PCL1	YNL289W	IME2	P32581	645 aa		4.92	□□□□□ -1.62
PCL1	YNL289W	CSE2	P33308	149 aa		4.92	□□□□□ -1.62
PCL1	YNL289W	VPS24	P36095	224 aa	Known RBP	4.92	□□□□□ -1.62
PCL1	YNL289W	FMP10	P40098	244 aa		4.92	□□□□□ -1.62
PCL1	YNL289W	LAM5	P43560	674 aa		4.92	□□□□□ -1.62
PCL1	YNL289W	VTC2	P43585	828 aa		4.92	□□□□□ -1.62
PCL1	YNL289W	SNA4	Q07549	140 aa		4.92	□□□□□ -1.62
PCL1	YNL289W	SHS1	Q07657	551 aa		4.92	□□□□□ -1.62
PCL1	YNL289W	SWT1	Q12104	458 aa		4.92	□□□□□ -1.62
PCL1	YNL289W	UBX3	Q12229	455 aa		4.92	□□□□□ -1.62
PCL1	YNL289W	HIF1	Q12373	385 aa		4.92	□□□□□ -1.62
PCL1	YNL289W	PCD1	Q12524	340 aa		4.92	□□□□□ -1.62
PCL1	YNL289W	DDP1	Q99321	188 aa	Known RBP	4.92	□□□□□ -1.62
PCL1	YNL289W	ATP2	P00830	511 aa	Known RBP	4.91	□□□□□ -1.62
PCL1	YNL289W	SUI3	P09064	285 aa	Known RBP	4.91	□□□□□ -1.62
PCL1	YNL289W	YCR006C	P25350	157 aa		4.91	□□□□□ -1.62
PCL1	YNL289W	ADK2	P26364	225 aa		4.91	□□□□□ -1.62
PCL1	YNL289W	DPH2	P32461	534 aa		4.91	□□□□□ -1.62
PCL1	YNL289W	RPC25	P35718	212 aa		4.91	□□□□□ -1.62
PCL1	YNL289W	YKT6	P36015	200 aa	Known RBP	4.91	□□□□□ -1.62
PCL1	YNL289W	ADE17	P38009	592 aa	Known RBP	4.91	□□□□□ -1.62
PCL1	YNL289W	SLX1	P38324	304 aa		4.91	□□□□□ -1.62
PCL1	YNL289W	YHL026C	P38740	315 aa		4.91	□□□□□ -1.62
PCL1	YNL289W	LCB2	P40970	561 aa		4.91	□□□□□ -1.62
PCL1	YNL289W	FRE3	Q08905	711 aa		4.91	□□□□□ -1.62
PCL1	YNL289W	TCO89	Q08921	799 aa		4.91	□□□□□ -1.62
PCL1	YNL289W	RPL42A	P0CX27	106 aa	Known RBP	4.9	□□□□□ -1.63
PCL1	YNL289W	RPL42B	P0CX28	106 aa	Known RBP	4.9	□□□□□ -1.63
PCL1	YNL289W	MSP1	P28737	362 aa		4.9	□□□□□ -1.63
PCL1	YNL289W	GCS1	P35197	352 aa		4.9	□□□□□ -1.63
PCL1	YNL289W	HEL1	P36113	551 aa		4.9	□□□□□ -1.63
PCL1	YNL289W	UBP13	P38187	747 aa		4.9	□□□□□ -1.63
PCL1	YNL289W	PSY4	P38193	441 aa		4.9	□□□□□ -1.63
PCL1	YNL289W	NPR3	P38742	1146 aa		4.9	□□□□□ -1.63
PCL1	YNL289W	YIL161W	P40449	235 aa	Known RBP	4.9	□□□□□ -1.63
PCL1	YNL289W	ASG1	P40467	964 aa		4.9	□□□□□ -1.63
PCL1	YNL289W	FAF1	P40546	346 aa	Predicted RBP	4.9	□□□□□ -1.63
PCL1	YNL289W	AIP1	P46680	615 aa	Known RBP	4.9	□□□□□ -1.63
PCL1	YNL289W	CSL4	P53859	292 aa	Predicted RBP	4.9	□□□□□ -1.63
PCL1	YNL289W	YNL134C	P53912	376 aa	Known RBP	4.9	□□□□□ -1.63
PCL1	YNL289W	YLR455W	Q06188	304 aa		4.9	□□□□□ -1.63
PCL1	YNL289W	SWA2	Q06677	668 aa		4.9	□□□□□ -1.63
PCL1	YNL289W	MLH2	Q07980	695 aa		4.9	□□□□□ -1.63
PCL1	YNL289W	GSH2	Q08220	491 aa		4.9	□□□□□ -1.63
PCL1	YNL289W	SRL1	Q08673	210 aa		4.9	□□□□□ -1.63
PCL1	YNL289W	COX17	Q12287	69 aa		4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms