RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W DSN1P40568 576 aa6.05□□□□□ -1.44
CAF40YNL288W BUD32P53323 261 aa6.05□□□□□ -1.44
CAF40YNL288W FRE4P53746 719 aa6.05□□□□□ -1.44
CAF40YNL288W OSH6Q02201 448 aa6.05□□□□□ -1.44
CAF40YNL288W USA1Q03714 838 aa6.05□□□□□ -1.44
CAF40YNL288W HDA2Q06629 674 aa6.05□□□□□ -1.44
CAF40YNL288W ATG10Q07879 167 aa6.05□□□□□ -1.44
CAF40YNL288W NUS1Q12063 375 aa6.05□□□□□ -1.44
CAF40YNL288W SMF3Q12078 473 aaPredicted RBP6.05□□□□□ -1.44
CAF40YNL288W RUD3Q12234 484 aaKnown RBP6.05□□□□□ -1.44
CAF40YNL288W NAG1Q8TGN9 163 aa6.05□□□□□ -1.44
CAF40YNL288W COX3P00420 269 aa6.04□□□□□ -1.44
CAF40YNL288W INH1P01097 85 aa6.04□□□□□ -1.44
CAF40YNL288W SPT15P13393 240 aaKnown RBP6.04□□□□□ -1.44
CAF40YNL288W PHO84P25297 587 aaKnown RBP6.04□□□□□ -1.44
CAF40YNL288W SNT1P25357 1226 aa6.04□□□□□ -1.44
CAF40YNL288W YCR099CP25657 155 aa6.04□□□□□ -1.44
CAF40YNL288W RFA2P26754 273 aaKnown RBP6.04□□□□□ -1.44
CAF40YNL288W TFB1P32776 642 aa6.04□□□□□ -1.44
CAF40YNL288W CYM1P32898 989 aa6.04□□□□□ -1.44
CAF40YNL288W PRP18P33411 251 aaPredicted RBP6.04□□□□□ -1.44
CAF40YNL288W YHL012WP38709 493 aa6.04□□□□□ -1.44
CAF40YNL288W PCL5P38794 229 aa6.04□□□□□ -1.44
CAF40YNL288W PTC7P38797 343 aa6.04□□□□□ -1.44
CAF40YNL288W PFS1P38872 237 aa6.04□□□□□ -1.44
CAF40YNL288W CYC2P38909 366 aa6.04□□□□□ -1.44
CAF40YNL288W PEX7P39108 375 aa6.04□□□□□ -1.44
CAF40YNL288W TIM17P39515 158 aa6.04□□□□□ -1.44
CAF40YNL288W NBP35P52920 328 aa6.04□□□□□ -1.44
CAF40YNL288W TAF11Q04226 346 aa6.04□□□□□ -1.44
CAF40YNL288W ARG7Q04728 441 aa6.04□□□□□ -1.44
CAF40YNL288W YLR177WQ06251 628 aa6.04□□□□□ -1.44
CAF40YNL288W MRL1Q06815 381 aa6.04□□□□□ -1.44
CAF40YNL288W YOR012WQ12351 137 aa6.04□□□□□ -1.44
CAF40YNL288W RGS2Q99188 309 aa6.04□□□□□ -1.44
CAF40YNL288W GLN4P13188 809 aaKnown RBP6.03□□□□□ -1.44
CAF40YNL288W ABF1P14164 731 aa6.03□□□□□ -1.44
CAF40YNL288W MRPL9P31334 269 aa6.03□□□□□ -1.44
CAF40YNL288W TIP20P33891 701 aa6.03□□□□□ -1.44
CAF40YNL288W OAF3P36023 863 aa6.03□□□□□ -1.44
CAF40YNL288W RRP14P36080 434 aaKnown RBP6.03□□□□□ -1.44
CAF40YNL288W GMH1P36125 273 aa6.03□□□□□ -1.44
CAF40YNL288W WSC4P38739 605 aa6.03□□□□□ -1.44
CAF40YNL288W YHR182WP38870 785 aa6.03□□□□□ -1.44
CAF40YNL288W SAP1P39955 897 aaKnown RBP6.03□□□□□ -1.44
CAF40YNL288W TIF34P40217 347 aaKnown RBP6.03□□□□□ -1.44
CAF40YNL288W BIO4P53630 237 aa6.03□□□□□ -1.44
CAF40YNL288W RCF2P53721 224 aa6.03□□□□□ -1.44
CAF40YNL288W SNO2P53823 222 aa6.03□□□□□ -1.44
CAF40YNL288W BUD22Q04347 519 aaKnown RBP6.03□□□□□ -1.44
CAF40YNL288W HEL2Q05580 639 aaKnown RBP6.03□□□□□ -1.44
CAF40YNL288W TDA5Q06417 326 aaKnown RBP6.03□□□□□ -1.44
CAF40YNL288W RPN8Q08723 338 aaKnown RBP6.03□□□□□ -1.44
CAF40YNL288W VPS68Q12016 184 aa6.03□□□□□ -1.44
CAF40YNL288W SRO7Q12038 1033 aa6.03□□□□□ -1.44
CAF40YNL288W YKL068W-AQ3E826 78 aa6.03□□□□□ -1.44
CAF40YNL288W STE2D6VTK4 431 aa6.02□□□□□ -1.45
CAF40YNL288W SPS1P08458 490 aa6.02□□□□□ -1.45
CAF40YNL288W TRX2P22803 104 aaKnown RBP6.02□□□□□ -1.45
CAF40YNL288W SEC14P24280 304 aaKnown RBP6.02□□□□□ -1.45
CAF40YNL288W MSH1P25846 959 aa6.02□□□□□ -1.45
CAF40YNL288W TFC3P34111 1160 aa6.02□□□□□ -1.45
CAF40YNL288W YPT52P36018 234 aaKnown RBP6.02□□□□□ -1.45
CAF40YNL288W MUM2P38236 366 aa6.02□□□□□ -1.45
CAF40YNL288W RRP3P38712 501 aaKnown RBP6.02□□□□□ -1.45
CAF40YNL288W MEP1P40260 492 aa6.02□□□□□ -1.45
CAF40YNL288W YJL107CP42947 387 aa6.02□□□□□ -1.45
CAF40YNL288W GCD14P46959 383 aaPredicted RBP6.02□□□□□ -1.45
CAF40YNL288W LIA1P47120 325 aaKnown RBP6.02□□□□□ -1.45
CAF40YNL288W BIR1P47134 954 aa6.02□□□□□ -1.45
CAF40YNL288W NNF1P47149 201 aa6.02□□□□□ -1.45
CAF40YNL288W MNN10P50108 393 aaKnown RBP6.02□□□□□ -1.45
CAF40YNL288W BOL2P53082 120 aa6.02□□□□□ -1.45
CAF40YNL288W ZRG17P53735 605 aa6.02□□□□□ -1.45
CAF40YNL288W NHP10Q03435 203 aa6.02□□□□□ -1.45
CAF40YNL288W ARX1Q03862 593 aaKnown RBP6.02□□□□□ -1.45
CAF40YNL288W HPT1Q04178 221 aaKnown RBP6.02□□□□□ -1.45
CAF40YNL288W EMI1Q04406 187 aa6.02□□□□□ -1.45
CAF40YNL288W RCO1Q04779 684 aa6.02□□□□□ -1.45
CAF40YNL288W YLR053CQ12026 108 aa6.02□□□□□ -1.45
CAF40YNL288W ICT1Q12385 394 aa6.02□□□□□ -1.45
CAF40YNL288W UBR1P19812 1950 aa6.02□□□□□ -1.45
CAF40YNL288W YPR089WO13585 888 aa6.01□□□□□ -1.45
CAF40YNL288W CAN1P04817 590 aa6.01□□□□□ -1.45
CAF40YNL288W SRV2P17555 526 aaKnown RBP6.01□□□□□ -1.45
CAF40YNL288W RPB4P20433 221 aaPredicted RBP6.01□□□□□ -1.45
CAF40YNL288W PHO3P24031 467 aa6.01□□□□□ -1.45
CAF40YNL288W YCR051WP25631 222 aa6.01□□□□□ -1.45
CAF40YNL288W PHA2P32452 334 aa6.01□□□□□ -1.45
CAF40YNL288W RPF2P36160 344 aaKnown RBP6.01□□□□□ -1.45
CAF40YNL288W ALG3P38179 458 aa6.01□□□□□ -1.45
CAF40YNL288W YJL206CP39529 758 aa6.01□□□□□ -1.45
CAF40YNL288W PEP8P40335 379 aa6.01□□□□□ -1.45
CAF40YNL288W HOS4P40480 1083 aa6.01□□□□□ -1.45
CAF40YNL288W ARP4P80428 489 aa6.01□□□□□ -1.45
CAF40YNL288W YMR209CQ03648 457 aa6.01□□□□□ -1.45
CAF40YNL288W FAR8Q05040 523 aa6.01□□□□□ -1.45
CAF40YNL288W OMS1Q06668 471 aa6.01□□□□□ -1.45
CAF40YNL288W GRS2Q06817 618 aa6.01□□□□□ -1.45
CAF40YNL288W YLL032CQ07834 825 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45not detected
Retrieved 100 of 5,963 RNA–protein pairs in 98.9 ms