RNA–Protein interactions for RNA: YNL278W

CAF120, Transcript of Part of the CCR4-NOT transcriptional regulatory complex, yeast

Gene CAF120, Length 3,183 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF120	YNL278W	CCR4	P31384	837 aa	Known RBP	2.74	□□□□□ -1.97
CAF120	YNL278W	SMC1	P32908	1225 aa		2.74	□□□□□ -1.97
CAF120	YNL278W	CSG2	P35206	410 aa		2.74	□□□□□ -1.97
CAF120	YNL278W	PCH2	P38126	564 aa		2.74	□□□□□ -1.97
CAF120	YNL278W	MMS4	P38257	691 aa		2.74	□□□□□ -1.97
CAF120	YNL278W	IFA38	P38286	347 aa		2.74	□□□□□ -1.97
CAF120	YNL278W	MNL1	P38888	796 aa		2.74	□□□□□ -1.97
CAF120	YNL278W	OSW5	P40219	148 aa		2.74	□□□□□ -1.97
CAF120	YNL278W	YIL067C	P40514	678 aa		2.74	□□□□□ -1.97
CAF120	YNL278W	NOP9	P47077	666 aa	Known RBP	2.74	□□□□□ -1.97
CAF120	YNL278W	PSP2	P50109	593 aa	Known RBP	2.74	□□□□□ -1.97
CAF120	YNL278W	TEL2	P53038	688 aa		2.74	□□□□□ -1.97
CAF120	YNL278W	SLM2	P53955	656 aa		2.74	□□□□□ -1.97
CAF120	YNL278W	TIM8	P57744	87 aa		2.74	□□□□□ -1.97
CAF120	YNL278W	ISU1	Q03020	165 aa		2.74	□□□□□ -1.97
CAF120	YNL278W	SEC10	Q06245	871 aa		2.74	□□□□□ -1.97
CAF120	YNL278W	TLG2	Q08144	397 aa		2.74	□□□□□ -1.97
CAF120	YNL278W	DIN7	Q12086	430 aa		2.74	□□□□□ -1.97
CAF120	YNL278W	ACF2	Q12168	779 aa		2.74	□□□□□ -1.97
CAF120	YNL278W	MED4	Q12343	284 aa		2.74	□□□□□ -1.97
CAF120	YNL278W	YPR015C	Q12531	247 aa		2.74	□□□□□ -1.97
CAF120	YNL278W	RPS21B	Q3E754	87 aa	Known RBP	2.74	□□□□□ -1.97
CAF120	YNL278W	YLR462W	O13556	202 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	CDC26	P14724	124 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	SPB1	P25582	841 aa	Predicted RBP	2.73	□□□□□ -1.97
CAF120	YNL278W	MEI4	P29467	408 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	ATP3	P38077	311 aa	Known RBP	2.73	□□□□□ -1.97
CAF120	YNL278W	YHL049C	P38722	271 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	PCF11	P39081	626 aa	Predicted RBP	2.73	□□□□□ -1.97
CAF120	YNL278W	GDI1	P39958	451 aa	Known RBP	2.73	□□□□□ -1.97
CAF120	YNL278W	YEL075C	P39972	122 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	YER186C	P40101	306 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	YER189W	P40104	122 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	YFL064C	P43540	174 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	ZAP1	P47043	880 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	ASN1	P49089	572 aa	Known RBP	2.73	□□□□□ -1.97
CAF120	YNL278W	HSH155	P49955	971 aa	Known RBP	2.73	□□□□□ -1.97
CAF120	YNL278W	CUL3	P53202	744 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	VPS9	P54787	451 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	TVP15	Q03860	143 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	PRM6	Q04705	352 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	XYL2	Q07993	356 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	YOR289W	Q12012	251 aa	Predicted RBP	2.73	□□□□□ -1.97
CAF120	YNL278W	KCS1	Q12494	1050 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	SRN2	Q99176	213 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	CAR2	P07991	424 aa	Known RBP	2.73	□□□□□ -1.97
CAF120	YNL278W	RER1	P25560	188 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	CDC15	P27636	974 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	PYC2	P32327	1180 aa	Known RBP	2.73	□□□□□ -1.97
CAF120	YNL278W	SUR1	P33300	382 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	GDH2	P33327	1092 aa	Known RBP	2.73	□□□□□ -1.97
CAF120	YNL278W	SIP2	P34164	415 aa	Known RBP	2.73	□□□□□ -1.97
CAF120	YNL278W	RMA1	P36001	430 aa	Known RBP	2.73	□□□□□ -1.97
CAF120	YNL278W	VPS51	P36116	164 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	APM3	P38153	483 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	PEX28	P38848	579 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	ZRG8	P40021	1076 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	YIL077C	P40508	320 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	FET5	P43561	622 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	SIP4	P46954	829 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	ECL1	P48235	211 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	EXG2	P52911	562 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	MND1	P53102	219 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	COG5	P53951	403 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	HDA1	P53973	706 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	GPD1	Q00055	391 aa	Known RBP	2.73	□□□□□ -1.97
CAF120	YNL278W	YPL107W	Q02873	248 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	ARP10	Q04549	284 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	RTT103	Q05543	409 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	TRE1	Q08919	783 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	RBD2	Q12270	262 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	ISA2	Q12425	185 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	ARP6	Q12509	438 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	LAG2	Q92325	660 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	SEM1	O94742	89 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	TRP3	P00937	484 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	PFK1	P16861	987 aa	Known RBP	2.73	□□□□□ -1.97
CAF120	YNL278W	FUS3	P16892	353 aa	Known RBP	2.73	□□□□□ -1.97
CAF120	YNL278W	PHO81	P17442	1178 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	MSB1	P21339	1137 aa	Known RBP	2.73	□□□□□ -1.97
CAF120	YNL278W	CAD1	P24813	409 aa	Known RBP	2.73	□□□□□ -1.97
CAF120	YNL278W	YJU2	P28320	278 aa	Predicted RBP	2.73	□□□□□ -1.97
CAF120	YNL278W	SEC1	P30619	724 aa	Known RBP	2.73	□□□□□ -1.97
CAF120	YNL278W	RPS1A	P33442	255 aa	Known RBP	2.73	□□□□□ -1.97
CAF120	YNL278W	DID4	P36108	232 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	EXO5	P38289	585 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	STP2	P38704	541 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	SAW1	P39735	261 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	YER010C	P40011	234 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	PUG1	P40100	303 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	YMR147W	P40218	223 aa	Known RBP	2.73	□□□□□ -1.97
CAF120	YNL278W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	2.73	□□□□□ -1.97	not detected
CAF120	YNL278W	YGL176C	P46945	554 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	RPC17	P47076	161 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	RFX1	P48743	811 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	ZIP2	P53061	704 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	MUK1	Q02866	612 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	INA17	Q02888	182 aa		2.73	□□□□□ -1.97
CAF120	YNL278W	MRPS17	Q03246	237 aa	Predicted RBP	2.73	□□□□□ -1.97
CAF120	YNL278W	YMR155W	Q03795	547 aa		2.73	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms