RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	SMF3	Q12078	473 aa	Predicted RBP	5.73	□□□□□ -1.49
CSL4	YNL232W	EFG1	Q3E705	233 aa	Known RBP	5.73	□□□□□ -1.49
CSL4	YNL232W	IZH4	Q99393	312 aa		5.73	□□□□□ -1.49
CSL4	YNL232W	BCY1	P07278	416 aa	Known RBP	5.72	□□□□□ -1.49
CSL4	YNL232W	APA1	P16550	321 aa	Known RBP	5.72	□□□□□ -1.49
CSL4	YNL232W	PHO84	P25297	587 aa	Known RBP	5.72	□□□□□ -1.49
CSL4	YNL232W	ADH7	P25377	361 aa		5.72	□□□□□ -1.49
CSL4	YNL232W	GMH1	P36125	273 aa		5.72	□□□□□ -1.49
CSL4	YNL232W	ADE17	P38009	592 aa	Known RBP	5.72	□□□□□ -1.49
CSL4	YNL232W	ELO3	P40319	345 aa		5.72	□□□□□ -1.49
CSL4	YNL232W	ROK1	P45818	564 aa	Predicted RBP	5.72	□□□□□ -1.49
CSL4	YNL232W	TAD1	P53065	400 aa		5.72	□□□□□ -1.49
CSL4	YNL232W	COG1	P53079	417 aa		5.72	□□□□□ -1.49
CSL4	YNL232W	YGR127W	P53275	312 aa		5.72	□□□□□ -1.49
CSL4	YNL232W	ARE2	P53629	642 aa	Known RBP	5.72	□□□□□ -1.49
CSL4	YNL232W	FRE4	P53746	719 aa		5.72	□□□□□ -1.49
CSL4	YNL232W	RHO3	Q00245	231 aa	Known RBP	5.72	□□□□□ -1.49
CSL4	YNL232W	CIA1	Q05583	330 aa		5.72	□□□□□ -1.49
CSL4	YNL232W	YLR040C	Q07988	224 aa		5.72	□□□□□ -1.49
CSL4	YNL232W	SEY1	Q99287	776 aa		5.72	□□□□□ -1.49
CSL4	YNL232W	AI5_ALPHA	Q9ZZX1	630 aa		5.72	□□□□□ -1.49
CSL4	YNL232W	TUP1	P16649	713 aa		5.71	□□□□□ -1.5
CSL4	YNL232W	DCC1	P25559	380 aa		5.71	□□□□□ -1.5
CSL4	YNL232W	IMG1	P25626	169 aa		5.71	□□□□□ -1.5
CSL4	YNL232W	AEP1	P32493	518 aa		5.71	□□□□□ -1.5
CSL4	YNL232W	MIP6	P38760	659 aa	Known RBP	5.71	□□□□□ -1.5
CSL4	YNL232W	AIM18	P38884	321 aa		5.71	□□□□□ -1.5
CSL4	YNL232W	TES1	P41903	349 aa	Known RBP	5.71	□□□□□ -1.5
CSL4	YNL232W	YGR111W	P53265	400 aa		5.71	□□□□□ -1.5
CSL4	YNL232W	VPS9	P54787	451 aa		5.71	□□□□□ -1.5
CSL4	YNL232W	ENT5	Q03769	411 aa	Known RBP	5.71	□□□□□ -1.5
CSL4	YNL232W	ARX1	Q03862	593 aa	Known RBP	5.71	□□□□□ -1.5
CSL4	YNL232W	RSF1	Q05043	376 aa		5.71	□□□□□ -1.5
CSL4	YNL232W	RRP45	Q05636	305 aa	Known RBP	5.71	□□□□□ -1.5
CSL4	YNL232W	YPR078C	Q06813	372 aa		5.71	□□□□□ -1.5
CSL4	YNL232W	LDB18	Q07887	179 aa		5.71	□□□□□ -1.5
CSL4	YNL232W	RPL7A	P05737	244 aa	Known RBP	5.7	□□□□□ -1.5
CSL4	YNL232W	URA4	P20051	364 aa		5.7	□□□□□ -1.5
CSL4	YNL232W	YSR3	P23501	404 aa		5.7	□□□□□ -1.5
CSL4	YNL232W	YHR033W	P38690	423 aa		5.7	□□□□□ -1.5
CSL4	YNL232W	PCL5	P38794	229 aa		5.7	□□□□□ -1.5
CSL4	YNL232W	YHR210C	P38893	341 aa		5.7	□□□□□ -1.5
CSL4	YNL232W	CCT5	P40413	562 aa	Known RBP	5.7	□□□□□ -1.5
CSL4	YNL232W	YGR053C	P53234	283 aa		5.7	□□□□□ -1.5
CSL4	YNL232W	GFD1	Q04839	188 aa	Known RBP	5.7	□□□□□ -1.5
CSL4	YNL232W	TGL5	Q12043	749 aa		5.7	□□□□□ -1.5
CSL4	YNL232W	RPL7B	Q12213	244 aa	Known RBP	5.7	□□□□□ -1.5
CSL4	YNL232W	CPA1	P07258	411 aa	Known RBP	5.69	□□□□□ -1.5
CSL4	YNL232W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	5.69	□□□□□ -1.5	not detected
CSL4	YNL232W	MFT1	P33441	392 aa	Known RBP	5.69	□□□□□ -1.5
CSL4	YNL232W	FTH1	P38310	465 aa		5.69	□□□□□ -1.5
CSL4	YNL232W	DBP8	P38719	431 aa		5.69	□□□□□ -1.5
CSL4	YNL232W	YEL073C	P39974	107 aa		5.69	□□□□□ -1.5
CSL4	YNL232W	KHA1	P40309	873 aa		5.69	□□□□□ -1.5
CSL4	YNL232W	ELP2	P42935	788 aa		5.69	□□□□□ -1.5
CSL4	YNL232W	RFX1	P48743	811 aa		5.69	□□□□□ -1.5
CSL4	YNL232W	NNF2	P53253	936 aa		5.69	□□□□□ -1.5
CSL4	YNL232W	RNH70	P53331	553 aa		5.69	□□□□□ -1.5
CSL4	YNL232W	HST1	P53685	503 aa		5.69	□□□□□ -1.5
CSL4	YNL232W	SRP1	Q02821	542 aa	Known RBP	5.69	□□□□□ -1.5
CSL4	YNL232W	CLN1	P20437	546 aa		5.68	□□□□□ -1.5
CSL4	YNL232W	VPS34	P22543	875 aa		5.68	□□□□□ -1.5
CSL4	YNL232W	CPR3	P25719	182 aa		5.68	□□□□□ -1.5
CSL4	YNL232W	GDA1	P32621	518 aa		5.68	□□□□□ -1.5
CSL4	YNL232W	NTR2	P36118	322 aa	Predicted RBP	5.68	□□□□□ -1.5
CSL4	YNL232W	FMP46	P36141	133 aa	Known RBP	5.68	□□□□□ -1.5
CSL4	YNL232W	OTU2	P38747	307 aa	Known RBP	5.68	□□□□□ -1.5
CSL4	YNL232W	PMC1	P38929	1173 aa	Predicted RBP	5.68	□□□□□ -1.5
CSL4	YNL232W	MBP1	P39678	833 aa		5.68	□□□□□ -1.5
CSL4	YNL232W	GND2	P53319	492 aa		5.68	□□□□□ -1.5
CSL4	YNL232W	CDC14	Q00684	551 aa		5.68	□□□□□ -1.5
CSL4	YNL232W	YDL121C	Q07541	149 aa		5.68	□□□□□ -1.5
CSL4	YNL232W	DIN7	Q12086	430 aa		5.68	□□□□□ -1.5
CSL4	YNL232W	UPC2	Q12151	913 aa		5.68	□□□□□ -1.5
CSL4	YNL232W	YLR149C	Q99296	730 aa		5.68	□□□□□ -1.5
CSL4	YNL232W	SFL1	P20134	766 aa		5.67	□□□□□ -1.5
CSL4	YNL232W	GSY2	P27472	705 aa		5.67	□□□□□ -1.5
CSL4	YNL232W	CDC12	P32468	407 aa	Known RBP	5.67	□□□□□ -1.5
CSL4	YNL232W	YHR182W	P38870	785 aa		5.67	□□□□□ -1.5
CSL4	YNL232W	IRR1	P40541	1150 aa		5.67	□□□□□ -1.5
CSL4	YNL232W	HYR1	P40581	163 aa	Known RBP	5.67	□□□□□ -1.5
CSL4	YNL232W	TRM9	P49957	279 aa		5.67	□□□□□ -1.5
CSL4	YNL232W	SAP4	P53036	818 aa		5.67	□□□□□ -1.5
CSL4	YNL232W	YNL247W	P53852	767 aa	Known RBP	5.67	□□□□□ -1.5
CSL4	YNL232W	ECM9	Q02202	377 aa		5.67	□□□□□ -1.5
CSL4	YNL232W	ERV41	Q04651	352 aa		5.67	□□□□□ -1.5
CSL4	YNL232W	RRN11	Q04712	507 aa		5.67	□□□□□ -1.5
CSL4	YNL232W	ARP9	Q05123	467 aa		5.67	□□□□□ -1.5
CSL4	YNL232W	REH1	Q06709	432 aa		5.67	□□□□□ -1.5
CSL4	YNL232W	BUD7	Q08754	746 aa		5.67	□□□□□ -1.5
CSL4	YNL232W	HUA2	Q12134	243 aa		5.67	□□□□□ -1.5
CSL4	YNL232W	TSR4	P25040	408 aa		5.66	□□□□□ -1.5
CSL4	YNL232W	MSH1	P25846	959 aa		5.66	□□□□□ -1.5
CSL4	YNL232W	MEI4	P29467	408 aa		5.66	□□□□□ -1.5
CSL4	YNL232W	MRPL9	P31334	269 aa		5.66	□□□□□ -1.5
CSL4	YNL232W	HEM12	P32347	362 aa	Predicted RBP	5.66	□□□□□ -1.5
CSL4	YNL232W	NIP1	P32497	812 aa	Known RBP	5.66	□□□□□ -1.5
CSL4	YNL232W	BDH2	P39713	417 aa		5.66	□□□□□ -1.5
CSL4	YNL232W	LSM5	P40089	93 aa	Known RBP	5.66	□□□□□ -1.5
CSL4	YNL232W	HOS4	P40480	1083 aa		5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 15 ms