RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W ARP5P53946 755 aa7.04□□□□□ -1.28
HDA1YNL021W BOP3P53958 396 aa7.04□□□□□ -1.28
HDA1YNL021W IRC4Q03036 179 aa7.04□□□□□ -1.28
HDA1YNL021W MSC3Q05812 728 aa7.04□□□□□ -1.28
HDA1YNL021W YLR358CO13565 187 aa7.04□□□□□ -1.28
HDA1YNL021W BUD5P25300 642 aaPredicted RBP7.04□□□□□ -1.28
HDA1YNL021W FIG2P25653 1609 aa7.04□□□□□ -1.28
HDA1YNL021W MRPL7P36519 292 aa7.04□□□□□ -1.28
HDA1YNL021W MLH1P38920 769 aa7.04□□□□□ -1.28
HDA1YNL021W YIR042CP40586 236 aa7.04□□□□□ -1.28
HDA1YNL021W RRN5Q02983 363 aa7.04□□□□□ -1.28
HDA1YNL021W ATG23Q06671 453 aa7.04□□□□□ -1.28
HDA1YNL021W YBR255C-AQ3E776 120 aa7.04□□□□□ -1.28
HDA1YNL021W IDH2P28241 369 aaKnown RBP7.03□□□□□ -1.28
HDA1YNL021W KSP1P38691 1029 aaKnown RBP7.03□□□□□ -1.28
HDA1YNL021W SEC31P38968 1273 aaKnown RBP7.03□□□□□ -1.28
HDA1YNL021W YFH7P43591 353 aa7.03□□□□□ -1.28
HDA1YNL021W NRG1Q03125 231 aa7.03□□□□□ -1.28
HDA1YNL021W DIA2Q08496 732 aaPredicted RBP7.03□□□□□ -1.28
HDA1YNL021W FAS2P19097 1887 aaKnown RBP7.03□□□□□ -1.28
HDA1YNL021W MRP13P12686 339 aa7.03□□□□□ -1.28
HDA1YNL021W SMY1P32364 656 aaKnown RBP7.03□□□□□ -1.28
HDA1YNL021W YHL017WP38745 532 aa7.03□□□□□ -1.28
HDA1YNL021W ALK1P43633 760 aaKnown RBP7.03□□□□□ -1.28
HDA1YNL021W YGR079WP53249 370 aa7.03□□□□□ -1.28
HDA1YNL021W ERG5P54781 538 aa7.03□□□□□ -1.28
HDA1YNL021W RPT5P33297 434 aaKnown RBP7.02□□□□□ -1.29
HDA1YNL021W NIP100P33420 868 aa7.02□□□□□ -1.29
HDA1YNL021W PTK1P36002 662 aaPredicted RBP7.02□□□□□ -1.29
HDA1YNL021W VPS45P38932 577 aa7.02□□□□□ -1.29
HDA1YNL021W BFR1P38934 470 aaKnown RBP RIP-Chip data7.02□□□□□ -1.29not detected
HDA1YNL021W KEL2P50090 882 aa7.02□□□□□ -1.29
HDA1YNL021W VTA1Q06263 330 aa7.02□□□□□ -1.29
HDA1YNL021W FRE5Q08908 694 aa7.02□□□□□ -1.29
HDA1YNL021W HIP1P06775 603 aa7.01□□□□□ -1.29
HDA1YNL021W HIS5P07172 385 aa7.01□□□□□ -1.29
HDA1YNL021W MATALPHA2P0CY08 210 aa7.01□□□□□ -1.29
HDA1YNL021W HMLALPHA2P0CY09 210 aa7.01□□□□□ -1.29
HDA1YNL021W COQ1P18900 473 aa7.01□□□□□ -1.29
HDA1YNL021W SRP54P20424 541 aaKnown RBP7.01□□□□□ -1.29
HDA1YNL021W RRP43P25359 394 aaPredicted RBP7.01□□□□□ -1.29
HDA1YNL021W MET22P32179 357 aa7.01□□□□□ -1.29
HDA1YNL021W LSB3P43603 459 aaKnown RBP7.01□□□□□ -1.29
HDA1YNL021W NUP84P52891 726 aa7.01□□□□□ -1.29
HDA1YNL021W ARI1P53111 347 aaKnown RBP7.01□□□□□ -1.29
HDA1YNL021W GTF1P53260 183 aaPredicted RBP7.01□□□□□ -1.29
HDA1YNL021W SPC98P53540 846 aa7.01□□□□□ -1.29
HDA1YNL021W CTK1Q03957 528 aaKnown RBP7.01□□□□□ -1.29
HDA1YNL021W ECM18Q04623 453 aa7.01□□□□□ -1.29
HDA1YNL021W KAP95Q06142 861 aaKnown RBP7.01□□□□□ -1.29
HDA1YNL021W RRT8Q08219 342 aa7.01□□□□□ -1.29
HDA1YNL021W HKR1P41809 1802 aa7.01□□□□□ -1.29
HDA1YNL021W PDA1P16387 420 aaKnown RBP7.01□□□□□ -1.29
HDA1YNL021W PRX1P34227 261 aaKnown RBP7.01□□□□□ -1.29
HDA1YNL021W SDH8P38345 138 aa7.01□□□□□ -1.29
HDA1YNL021W ALG5P40350 334 aa7.01□□□□□ -1.29
HDA1YNL021W PKP1P40530 394 aa7.01□□□□□ -1.29
HDA1YNL021W VID30P53076 958 aa7.01□□□□□ -1.29
HDA1YNL021W YNL143CP53908 130 aa7.01□□□□□ -1.29
HDA1YNL021W DAK1P54838 584 aaKnown RBP7.01□□□□□ -1.29
HDA1YNL021W ACL4Q03771 387 aa7.01□□□□□ -1.29
HDA1YNL021W BUD22Q04347 519 aaKnown RBP7.01□□□□□ -1.29
HDA1YNL021W IZH3Q07959 543 aa7.01□□□□□ -1.29
HDA1YNL021W HMI1Q12039 706 aa7.01□□□□□ -1.29
HDA1YNL021W YPL150WQ12152 901 aa7.01□□□□□ -1.29
HDA1YNL021W SFG1Q12507 346 aa7.01□□□□□ -1.29
HDA1YNL021W SEC39Q12745 709 aa7.01□□□□□ -1.29
HDA1YNL021W SEC15P22224 910 aa7□□□□□ -1.29
HDA1YNL021W HRB1P38922 454 aaKnown RBP RIP-Chip data7□□□□□ -1.29not detected
HDA1YNL021W ELP2P42935 788 aa7□□□□□ -1.29
HDA1YNL021W LAM5P43560 674 aa7□□□□□ -1.29
HDA1YNL021W RPS7BP48164 190 aaKnown RBP7□□□□□ -1.29
HDA1YNL021W RPS15Q01855 142 aaKnown RBP7□□□□□ -1.29
HDA1YNL021W PPM1Q04081 328 aa7□□□□□ -1.29
HDA1YNL021W CRN1Q06440 651 aa7□□□□□ -1.29
HDA1YNL021W TRM11Q12463 433 aa7□□□□□ -1.29
HDA1YNL021W GRR1P24814 1151 aa7□□□□□ -1.29
HDA1YNL021W YIL089WP40500 205 aa7□□□□□ -1.29
HDA1YNL021W FMP40Q08968 688 aaPredicted RBP7□□□□□ -1.29
HDA1YNL021W TAL1P15019 335 aaKnown RBP6.99□□□□□ -1.29
HDA1YNL021W FAA1P30624 700 aaKnown RBP6.99□□□□□ -1.29
HDA1YNL021W ELM1P32801 640 aa6.99□□□□□ -1.29
HDA1YNL021W CTM1P38818 585 aa6.99□□□□□ -1.29
HDA1YNL021W RSM25P40496 264 aa6.99□□□□□ -1.29
HDA1YNL021W YAT1P80235 687 aa6.99□□□□□ -1.29
HDA1YNL021W FIN1Q03898 291 aa6.99□□□□□ -1.29
HDA1YNL021W MRI1Q06489 411 aaKnown RBP6.99□□□□□ -1.29
HDA1YNL021W NPC2Q12408 173 aa6.99□□□□□ -1.29
HDA1YNL021W GCD1P09032 578 aaPredicted RBP6.98□□□□□ -1.29
HDA1YNL021W HNM1P19807 563 aa6.98□□□□□ -1.29
HDA1YNL021W ELO2P25358 347 aa6.98□□□□□ -1.29
HDA1YNL021W SSE2P32590 693 aaKnown RBP6.98□□□□□ -1.29
HDA1YNL021W TUL1P36096 758 aa6.98□□□□□ -1.29
HDA1YNL021W PXL1P36166 706 aa6.98□□□□□ -1.29
HDA1YNL021W AGP2P38090 596 aa6.98□□□□□ -1.29
HDA1YNL021W VPS54Q12071 889 aa6.98□□□□□ -1.29
HDA1YNL021W SNF3P10870 884 aa6.98□□□□□ -1.29
HDA1YNL021W PPH22P23595 377 aa6.98□□□□□ -1.29
HDA1YNL021W COY1P34237 679 aa6.98□□□□□ -1.29
HDA1YNL021W MEF2P39677 819 aa6.98□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms