RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUS1	YMR240C	AIM17	P23180	465 aa	Known RBP	4.63	□□□□□ -1.67
CUS1	YMR240C	PAP1	P29468	568 aa	Known RBP	4.63	□□□□□ -1.67
CUS1	YMR240C	VMA8	P32610	256 aa	Known RBP	4.63	□□□□□ -1.67
CUS1	YMR240C	SAS3	P34218	831 aa		4.63	□□□□□ -1.67
CUS1	YMR240C	YKL023W	P36103	277 aa	Known RBP	4.63	□□□□□ -1.67
CUS1	YMR240C	ROT2	P38138	954 aa		4.63	□□□□□ -1.67
CUS1	YMR240C	LAG1	P38703	411 aa		4.63	□□□□□ -1.67
CUS1	YMR240C	YHR210C	P38893	341 aa		4.63	□□□□□ -1.67
CUS1	YMR240C	FLO5	P38894	1075 aa		4.63	□□□□□ -1.67
CUS1	YMR240C	PKP2	P53170	491 aa		4.63	□□□□□ -1.67
CUS1	YMR240C	SOL4	P53315	255 aa		4.63	□□□□□ -1.67
CUS1	YMR240C	RPL15B	P54780	204 aa	Predicted RBP	4.63	□□□□□ -1.67
CUS1	YMR240C	PDS5	Q04264	1277 aa		4.63	□□□□□ -1.67
CUS1	YMR240C	GSH2	Q08220	491 aa		4.63	□□□□□ -1.67
CUS1	YMR240C	EDE1	P34216	1381 aa		4.62	□□□□□ -1.67
CUS1	YMR240C	CBP1	P07252	654 aa		4.62	□□□□□ -1.67
CUS1	YMR240C	PEP4	P07267	405 aa	Known RBP	4.62	□□□□□ -1.67
CUS1	YMR240C	CLC1	P17891	233 aa		4.62	□□□□□ -1.67
CUS1	YMR240C	PRP2	P20095	876 aa	Predicted RBP	4.62	□□□□□ -1.67
CUS1	YMR240C	ADK2	P26364	225 aa		4.62	□□□□□ -1.67
CUS1	YMR240C	BUD14	P27637	709 aa		4.62	□□□□□ -1.67
CUS1	YMR240C	DBF4	P32325	704 aa		4.62	□□□□□ -1.67
CUS1	YMR240C	ECM32	P32644	1121 aa	Known RBP	4.62	□□□□□ -1.67
CUS1	YMR240C	SHP1	P34223	423 aa		4.62	□□□□□ -1.67
CUS1	YMR240C	SCO2	P38072	301 aa		4.62	□□□□□ -1.67
CUS1	YMR240C	YMR124W	P39523	943 aa	Known RBP	4.62	□□□□□ -1.67
CUS1	YMR240C	SNG1	P46950	547 aa		4.62	□□□□□ -1.67
CUS1	YMR240C	AIM22	P47051	409 aa		4.62	□□□□□ -1.67
CUS1	YMR240C	YML6	P51998	286 aa		4.62	□□□□□ -1.67
CUS1	YMR240C	RPA49	Q01080	415 aa	Predicted RBP	4.62	□□□□□ -1.67
CUS1	YMR240C	YVH1	Q02256	364 aa	Known RBP	4.62	□□□□□ -1.67
CUS1	YMR240C	YMR160W	Q03823	816 aa		4.62	□□□□□ -1.67
CUS1	YMR240C	VTA1	Q06263	330 aa		4.62	□□□□□ -1.67
CUS1	YMR240C	RDR1	Q08904	546 aa		4.62	□□□□□ -1.67
CUS1	YMR240C	YML133C	Q03099	1374 aa		4.61	□□□□□ -1.67
CUS1	YMR240C	YLL067C	Q07888	1374 aa		4.61	□□□□□ -1.67
CUS1	YMR240C	YLL066C	Q99208	1374 aa		4.61	□□□□□ -1.67
CUS1	YMR240C	YPR089W	O13585	888 aa		4.61	□□□□□ -1.67
CUS1	YMR240C	RPL31B	P0C2H9	113 aa	Known RBP	4.61	□□□□□ -1.67
CUS1	YMR240C	PTP1	P25044	335 aa		4.61	□□□□□ -1.67
CUS1	YMR240C	SNC1	P31109	117 aa		4.61	□□□□□ -1.67
CUS1	YMR240C	PXA2	P34230	853 aa		4.61	□□□□□ -1.67
CUS1	YMR240C	DLD2	P46681	530 aa	Known RBP	4.61	□□□□□ -1.67
CUS1	YMR240C	CAF130	P53280	1122 aa	Predicted RBP	4.61	□□□□□ -1.67
CUS1	YMR240C	SMM1	P53720	384 aa	Known RBP	4.61	□□□□□ -1.67
CUS1	YMR240C	DUG3	P53871	357 aa		4.61	□□□□□ -1.67
CUS1	YMR240C	YNL181W	P53878	407 aa		4.61	□□□□□ -1.67
CUS1	YMR240C	TAP42	Q04372	366 aa		4.61	□□□□□ -1.67
CUS1	YMR240C	YDL057W	Q07379	328 aa		4.61	□□□□□ -1.67
CUS1	YMR240C	YOR365C	Q08844	703 aa		4.61	□□□□□ -1.67
CUS1	YMR240C	YPT1	P01123	206 aa	Known RBP	4.6	□□□□□ -1.67
CUS1	YMR240C	PEP5	P12868	1029 aa		4.6	□□□□□ -1.67
CUS1	YMR240C	REC107	P21651	314 aa		4.6	□□□□□ -1.67
CUS1	YMR240C	GID7	P25569	745 aa		4.6	□□□□□ -1.67
CUS1	YMR240C	YPK3	P38070	525 aa		4.6	□□□□□ -1.67
CUS1	YMR240C	SRP72	P38688	640 aa	Known RBP	4.6	□□□□□ -1.67
CUS1	YMR240C	PCL6	P40038	420 aa		4.6	□□□□□ -1.67
CUS1	YMR240C	YJL068C	P40363	299 aa		4.6	□□□□□ -1.67
CUS1	YMR240C	NET1	P47035	1189 aa		4.6	□□□□□ -1.67
CUS1	YMR240C	STP1	Q00947	519 aa		4.6	□□□□□ -1.67
CUS1	YMR240C	NUP100	Q02629	959 aa		4.6	□□□□□ -1.67
CUS1	YMR240C	RMT2	Q03305	412 aa		4.6	□□□□□ -1.67
CUS1	YMR240C	IZH1	Q03419	316 aa		4.6	□□□□□ -1.67
CUS1	YMR240C	MRPL1	Q04599	285 aa		4.6	□□□□□ -1.67
CUS1	YMR240C	SMC6	Q12749	1114 aa		4.6	□□□□□ -1.67
CUS1	YMR240C	HOM3	P10869	527 aa		4.59	□□□□□ -1.67
CUS1	YMR240C	MDM10	P18409	493 aa		4.59	□□□□□ -1.67
CUS1	YMR240C	YCP4	P25349	247 aa	Known RBP	4.59	□□□□□ -1.67
CUS1	YMR240C	YCR051W	P25631	222 aa		4.59	□□□□□ -1.67
CUS1	YMR240C	IAH1	P41734	238 aa		4.59	□□□□□ -1.67
CUS1	YMR240C	SSU1	P41930	458 aa		4.59	□□□□□ -1.67
CUS1	YMR240C	GAT1	P43574	510 aa		4.59	□□□□□ -1.67
CUS1	YMR240C	ATG27	P46989	271 aa		4.59	□□□□□ -1.67
CUS1	YMR240C	RSC1	P53236	928 aa		4.59	□□□□□ -1.67
CUS1	YMR240C	YNL234W	P53857	426 aa		4.59	□□□□□ -1.67
CUS1	YMR240C	RHO4	Q00246	291 aa		4.59	□□□□□ -1.67
CUS1	YMR240C	SHR3	Q02774	210 aa		4.59	□□□□□ -1.67
CUS1	YMR240C	EKI1	Q03764	534 aa		4.59	□□□□□ -1.67
CUS1	YMR240C	RBS1	Q05672	457 aa	Known RBP	4.59	□□□□□ -1.67
CUS1	YMR240C	SSK1	Q07084	712 aa		4.59	□□□□□ -1.67
CUS1	YMR240C	THP1	Q08231	455 aa		4.59	□□□□□ -1.67
CUS1	YMR240C	HER1	Q12276	1246 aa		4.59	□□□□□ -1.67
CUS1	YMR240C	BRR1	Q99177	341 aa	Predicted RBP	4.59	□□□□□ -1.67
CUS1	YMR240C	YRF1-4	O13559	1382 aa		4.59	□□□□□ -1.68
CUS1	YMR240C	COR1	P07256	457 aa		4.58	□□□□□ -1.68
CUS1	YMR240C	HXT3	P32466	567 aa	Known RBP	4.58	□□□□□ -1.68
CUS1	YMR240C	PEX5	P35056	612 aa		4.58	□□□□□ -1.68
CUS1	YMR240C	STB6	P36085	766 aa		4.58	□□□□□ -1.68
CUS1	YMR240C	SPC97	P38863	823 aa		4.58	□□□□□ -1.68
CUS1	YMR240C	MBB1	P39534	108 aa		4.58	□□□□□ -1.68
CUS1	YMR240C	PCI8	P40512	444 aa		4.58	□□□□□ -1.68
CUS1	YMR240C	YJR154W	P47181	346 aa		4.58	□□□□□ -1.68
CUS1	YMR240C	MNP1	P53163	194 aa	Predicted RBP	4.58	□□□□□ -1.68
CUS1	YMR240C	DRN1	P53255	507 aa	Known RBP	4.58	□□□□□ -1.68
CUS1	YMR240C	SLG1	P54867	378 aa		4.58	□□□□□ -1.68
CUS1	YMR240C	YLR345W	Q06137	509 aa		4.58	□□□□□ -1.68
CUS1	YMR240C	RPL3	P14126	387 aa	Known RBP	4.57	□□□□□ -1.68
CUS1	YMR240C	RAD14	P28519	371 aa		4.57	□□□□□ -1.68
CUS1	YMR240C	MGM1	P32266	881 aa		4.57	□□□□□ -1.68
CUS1	YMR240C	PDR3	P33200	976 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 90.3 ms