RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W RBG2P53295 368 aaKnown RBP4.51□□□□□ -1.69
SPO20YMR017W RPT6Q01939 405 aaKnown RBP4.51□□□□□ -1.69
SPO20YMR017W YPL014WQ02606 381 aa4.51□□□□□ -1.69
SPO20YMR017W RPC11Q04307 110 aaPredicted RBP4.51□□□□□ -1.69
SPO20YMR017W RLM1Q12224 676 aa4.51□□□□□ -1.69
SPO20YMR017W SUI2P20459 304 aaKnown RBP4.5□□□□□ -1.69
SPO20YMR017W RPS2P25443 254 aaKnown RBP4.5□□□□□ -1.69
SPO20YMR017W MIC60P36112 540 aa4.5□□□□□ -1.69
SPO20YMR017W SPC34P36131 295 aa4.5□□□□□ -1.69
SPO20YMR017W ESL1P40456 1118 aa4.5□□□□□ -1.69
SPO20YMR017W AZF1P41696 914 aa4.5□□□□□ -1.69
SPO20YMR017W SNG1P46950 547 aa4.5□□□□□ -1.69
SPO20YMR017W MSS11Q03825 758 aa4.5□□□□□ -1.69
SPO20YMR017W VPS38Q05919 439 aa4.5□□□□□ -1.69
SPO20YMR017W DIC1Q06143 298 aa4.5□□□□□ -1.69
SPO20YMR017W CDC45Q08032 650 aa4.5□□□□□ -1.69
SPO20YMR017W DFR1P07807 211 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
SPO20YMR017W BAR1P12630 587 aa4.49□□□□□ -1.69
SPO20YMR017W PDA1P16387 420 aaKnown RBP4.49□□□□□ -1.69
SPO20YMR017W RPN2P32565 945 aaKnown RBP4.49□□□□□ -1.69
SPO20YMR017W YKL023WP36103 277 aaKnown RBP4.49□□□□□ -1.69
SPO20YMR017W BZZ1P38822 633 aa4.49□□□□□ -1.69
SPO20YMR017W SPO22P40511 975 aa4.49□□□□□ -1.69
SPO20YMR017W AXL1P40851 1208 aa4.49□□□□□ -1.69
SPO20YMR017W SAD1P43589 448 aa4.49□□□□□ -1.69
SPO20YMR017W ATG27P46989 271 aa4.49□□□□□ -1.69
SPO20YMR017W TDA9Q04545 1251 aa4.49□□□□□ -1.69
SPO20YMR017W COQ9Q05779 260 aa4.49□□□□□ -1.69
SPO20YMR017W YDL057WQ07379 328 aa4.49□□□□□ -1.69
SPO20YMR017W FMP45Q07651 309 aa4.49□□□□□ -1.69
SPO20YMR017W TAH18Q12181 623 aa4.49□□□□□ -1.69
SPO20YMR017W AVL9Q12500 764 aa4.49□□□□□ -1.69
SPO20YMR017W ARP6Q12509 438 aa4.49□□□□□ -1.69
SPO20YMR017W GAL80P04387 435 aa4.48□□□□□ -1.69
SPO20YMR017W ARG3P05150 338 aa4.48□□□□□ -1.69
SPO20YMR017W TYR1P20049 452 aa4.48□□□□□ -1.69
SPO20YMR017W YER130CP39959 443 aa4.48□□□□□ -1.69
SPO20YMR017W YEL057CP39983 233 aa4.48□□□□□ -1.69
SPO20YMR017W DOT5P40553 215 aa4.48□□□□□ -1.69
SPO20YMR017W YIR014WP40570 242 aa4.48□□□□□ -1.69
SPO20YMR017W BUD32P53323 261 aa4.48□□□□□ -1.69
SPO20YMR017W RHO4Q00246 291 aa4.48□□□□□ -1.69
SPO20YMR017W SHR3Q02774 210 aa4.48□□□□□ -1.69
SPO20YMR017W FIN1Q03898 291 aa4.48□□□□□ -1.69
SPO20YMR017W TSR2Q06672 205 aaKnown RBP4.48□□□□□ -1.69
SPO20YMR017W GRS2Q06817 618 aa4.48□□□□□ -1.69
SPO20YMR017W NCE102Q12207 173 aaRIP-Chip data4.48□□□□□ -1.69not detected
SPO20YMR017W CSR2Q12734 1121 aa4.48□□□□□ -1.69
SPO20YMR017W PEP5P12868 1029 aa4.47□□□□□ -1.69
SPO20YMR017W GLN3P18494 730 aa4.47□□□□□ -1.69
SPO20YMR017W SGV1P23293 657 aaKnown RBP4.47□□□□□ -1.69
SPO20YMR017W ACH1P32316 526 aa4.47□□□□□ -1.69
SPO20YMR017W ERG1P32476 496 aaKnown RBP4.47□□□□□ -1.69
SPO20YMR017W TRS65P32893 560 aa4.47□□□□□ -1.69
SPO20YMR017W WBP1P33767 430 aaKnown RBP4.47□□□□□ -1.69
SPO20YMR017W MET28P40573 187 aa4.47□□□□□ -1.69
SPO20YMR017W GUF1P46943 645 aa4.47□□□□□ -1.69
SPO20YMR017W TDA7P53882 636 aaPredicted RBP4.47□□□□□ -1.69
SPO20YMR017W MDM1Q01846 1127 aa4.47□□□□□ -1.69
SPO20YMR017W RTP1Q12751 981 aa4.47□□□□□ -1.69
SPO20YMR017W FOB1O13329 566 aa4.46□□□□□ -1.7
SPO20YMR017W PEP4P07267 405 aaKnown RBP4.46□□□□□ -1.7
SPO20YMR017W ELO2P25358 347 aa4.46□□□□□ -1.7
SPO20YMR017W PRD1P25375 712 aa4.46□□□□□ -1.7
SPO20YMR017W RRP3P38712 501 aaKnown RBP4.46□□□□□ -1.7
SPO20YMR017W MSR1P38714 643 aa4.46□□□□□ -1.7
SPO20YMR017W YHR210CP38893 341 aa4.46□□□□□ -1.7
SPO20YMR017W ARF3P40994 183 aaRIP-Chip data4.46□□□□□ -1.7not detected
SPO20YMR017W IRC6P43615 237 aa4.46□□□□□ -1.7
SPO20YMR017W PET130P47065 347 aa4.46□□□□□ -1.7
SPO20YMR017W HSH49Q99181 213 aaPredicted RBP4.46□□□□□ -1.7
SPO20YMR017W CDC23P16522 626 aa4.45□□□□□ -1.7
SPO20YMR017W YME1P32795 747 aa4.45□□□□□ -1.7
SPO20YMR017W ALK1P43633 760 aaKnown RBP4.45□□□□□ -1.7
SPO20YMR017W AIM22P47051 409 aa4.45□□□□□ -1.7
SPO20YMR017W DRN1P53255 507 aaKnown RBP4.45□□□□□ -1.7
SPO20YMR017W SAM50P53969 484 aa4.45□□□□□ -1.7
SPO20YMR017W TOF2Q02208 771 aa4.45□□□□□ -1.7
SPO20YMR017W RBA50Q04418 439 aa4.45□□□□□ -1.7
SPO20YMR017W YOR365CQ08844 703 aa4.45□□□□□ -1.7
SPO20YMR017W PDH1Q12428 516 aaKnown RBP4.45□□□□□ -1.7
SPO20YMR017W INH1P01097 85 aa4.44□□□□□ -1.7
SPO20YMR017W SEC1P30619 724 aaKnown RBP4.44□□□□□ -1.7
SPO20YMR017W RIM2P38127 377 aa4.44□□□□□ -1.7
SPO20YMR017W CST26P38226 397 aa4.44□□□□□ -1.7
SPO20YMR017W YJR154WP47181 346 aa4.44□□□□□ -1.7
SPO20YMR017W ALT2P52892 507 aa4.44□□□□□ -1.7
SPO20YMR017W YGL082WP53155 381 aa4.44□□□□□ -1.7
SPO20YMR017W CUL3P53202 744 aa4.44□□□□□ -1.7
SPO20YMR017W YDR239CQ03780 787 aa4.44□□□□□ -1.7
SPO20YMR017W GLO2Q05584 274 aa4.44□□□□□ -1.7
SPO20YMR017W THI20Q08224 551 aa4.44□□□□□ -1.7
SPO20YMR017W THP1Q08231 455 aa4.44□□□□□ -1.7
SPO20YMR017W RAD52P06778 471 aaKnown RBP4.43□□□□□ -1.7
SPO20YMR017W PPZ1P26570 692 aa4.43□□□□□ -1.7
SPO20YMR017W PAP1P29468 568 aaKnown RBP4.43□□□□□ -1.7
SPO20YMR017W MRE11P32829 692 aa4.43□□□□□ -1.7
SPO20YMR017W VPS17P32913 551 aa4.43□□□□□ -1.7
SPO20YMR017W SHP1P34223 423 aa4.43□□□□□ -1.7
SPO20YMR017W ECM15P35195 104 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 65.6 ms