RNA–Protein interactions for RNA: YLR308W

CDA2, Transcript of Chitin deacetylase, yeast

Gene CDA2, Length 939 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDA2	YLR308W	YMR160W	Q03823	816 aa		4.6	□□□□□ -1.67
CDA2	YLR308W	RTN2	Q12443	393 aa		4.6	□□□□□ -1.67
CDA2	YLR308W	GAL80	P04387	435 aa		4.59	□□□□□ -1.67
CDA2	YLR308W	CBP1	P07252	654 aa		4.59	□□□□□ -1.67
CDA2	YLR308W	PRD1	P25375	712 aa		4.59	□□□□□ -1.67
CDA2	YLR308W	SNC1	P31109	117 aa		4.59	□□□□□ -1.67
CDA2	YLR308W	YGR126W	P53274	230 aa		4.59	□□□□□ -1.67
CDA2	YLR308W	JJJ1	P53863	590 aa		4.59	□□□□□ -1.67
CDA2	YLR308W	IPI3	P53877	555 aa		4.59	□□□□□ -1.67
CDA2	YLR308W	ESBP6	P53918	673 aa		4.59	□□□□□ -1.67
CDA2	YLR308W	RQC1	Q05468	723 aa	Known RBP	4.59	□□□□□ -1.67
CDA2	YLR308W	YLR281C	Q05863	155 aa		4.59	□□□□□ -1.67
CDA2	YLR308W	RRG1	Q12167	365 aa	Predicted RBP	4.59	□□□□□ -1.67
CDA2	YLR308W	SGS1	P35187	1447 aa		4.58	□□□□□ -1.68
CDA2	YLR308W	MET17	P06106	444 aa		4.58	□□□□□ -1.68
CDA2	YLR308W	RRP3	P38712	501 aa	Known RBP	4.58	□□□□□ -1.68
CDA2	YLR308W	UBA4	P38820	440 aa		4.58	□□□□□ -1.68
CDA2	YLR308W	DOT5	P40553	215 aa		4.58	□□□□□ -1.68
CDA2	YLR308W	MAF1	P41910	395 aa		4.58	□□□□□ -1.68
CDA2	YLR308W	PET130	P47065	347 aa		4.58	□□□□□ -1.68
CDA2	YLR308W	IMD4	P50094	524 aa	Known RBP	4.58	□□□□□ -1.68
CDA2	YLR308W	YGL082W	P53155	381 aa		4.58	□□□□□ -1.68
CDA2	YLR308W	SGF73	P53165	657 aa		4.58	□□□□□ -1.68
CDA2	YLR308W	RSM23	Q01163	450 aa		4.58	□□□□□ -1.68
CDA2	YLR308W	TOF2	Q02208	771 aa		4.58	□□□□□ -1.68
CDA2	YLR308W	VTA1	Q06263	330 aa		4.58	□□□□□ -1.68
CDA2	YLR308W	RDR1	Q08904	546 aa		4.58	□□□□□ -1.68
CDA2	YLR308W	GRX6	Q12438	231 aa		4.58	□□□□□ -1.68
CDA2	YLR308W	SYN8	P31377	255 aa		4.57	□□□□□ -1.68
CDA2	YLR308W	ERG3	P32353	365 aa		4.57	□□□□□ -1.68
CDA2	YLR308W	WBP1	P33767	430 aa	Known RBP	4.57	□□□□□ -1.68
CDA2	YLR308W	PXA2	P34230	853 aa		4.57	□□□□□ -1.68
CDA2	YLR308W	BYE1	P36106	594 aa		4.57	□□□□□ -1.68
CDA2	YLR308W	LAG1	P38703	411 aa		4.57	□□□□□ -1.68
CDA2	YLR308W	MSR1	P38714	643 aa		4.57	□□□□□ -1.68
CDA2	YLR308W	PHO90	P39535	881 aa		4.57	□□□□□ -1.68
CDA2	YLR308W	PCL6	P40038	420 aa		4.57	□□□□□ -1.68
CDA2	YLR308W	DUG3	P53871	357 aa		4.57	□□□□□ -1.68
CDA2	YLR308W	RLM1	Q12224	676 aa		4.57	□□□□□ -1.68
CDA2	YLR308W	ARP6	Q12509	438 aa		4.57	□□□□□ -1.68
CDA2	YLR308W	DBF4	P32325	704 aa		4.56	□□□□□ -1.68
CDA2	YLR308W	SEC66	P33754	206 aa		4.56	□□□□□ -1.68
CDA2	YLR308W	YNK1	P36010	153 aa	Known RBP	4.56	□□□□□ -1.68
CDA2	YLR308W	YPK3	P38070	525 aa		4.56	□□□□□ -1.68
CDA2	YLR308W	ROT2	P38138	954 aa		4.56	□□□□□ -1.68
CDA2	YLR308W	LEU5	P38702	357 aa		4.56	□□□□□ -1.68
CDA2	YLR308W	SMF1	P38925	575 aa		4.56	□□□□□ -1.68
CDA2	YLR308W	YEL057C	P39983	233 aa		4.56	□□□□□ -1.68
CDA2	YLR308W	HXT14	P42833	540 aa		4.56	□□□□□ -1.68
CDA2	YLR308W	BET4	Q00618	327 aa		4.56	□□□□□ -1.68
CDA2	YLR308W	MRD1	Q06106	887 aa	Known RBP	4.56	□□□□□ -1.68
CDA2	YLR308W	SSK1	Q07084	712 aa		4.56	□□□□□ -1.68
CDA2	YLR308W	YDL218W	Q07629	317 aa		4.56	□□□□□ -1.68
CDA2	YLR308W	NDD1	Q08887	554 aa		4.56	□□□□□ -1.68
CDA2	YLR308W	EDE1	P34216	1381 aa		4.55	□□□□□ -1.68
CDA2	YLR308W	YML133C	Q03099	1374 aa		4.55	□□□□□ -1.68
CDA2	YLR308W	YLL067C	Q07888	1374 aa		4.55	□□□□□ -1.68
CDA2	YLR308W	YLL066C	Q99208	1374 aa		4.55	□□□□□ -1.68
CDA2	YLR308W	KGD1	P20967	1014 aa	Known RBP	4.55	□□□□□ -1.68
CDA2	YLR308W	GID7	P25569	745 aa		4.55	□□□□□ -1.68
CDA2	YLR308W	GPI10	P30777	616 aa		4.55	□□□□□ -1.68
CDA2	YLR308W	TIF3	P34167	436 aa	Known RBP	4.55	□□□□□ -1.68
CDA2	YLR308W	ANS1	P38832	159 aa		4.55	□□□□□ -1.68
CDA2	YLR308W	AXL1	P40851	1208 aa		4.55	□□□□□ -1.68
CDA2	YLR308W	PYK2	P52489	506 aa	Known RBP	4.55	□□□□□ -1.68
CDA2	YLR308W	ALT2	P52892	507 aa		4.55	□□□□□ -1.68
CDA2	YLR308W	HOS2	P53096	452 aa	Predicted RBP	4.55	□□□□□ -1.68
CDA2	YLR308W	SHR3	Q02774	210 aa		4.55	□□□□□ -1.68
CDA2	YLR308W	RSF1	Q05043	376 aa		4.55	□□□□□ -1.68
CDA2	YLR308W	RTT109	Q07794	436 aa		4.55	□□□□□ -1.68
CDA2	YLR308W	YOL159C	Q08300	171 aa		4.55	□□□□□ -1.68
CDA2	YLR308W	NRT1	Q08485	598 aa		4.55	□□□□□ -1.68
CDA2	YLR308W	ERP4	Q12450	207 aa		4.55	□□□□□ -1.68
CDA2	YLR308W	SNF3	P10870	884 aa		4.54	□□□□□ -1.68
CDA2	YLR308W	MRP13	P12686	339 aa		4.54	□□□□□ -1.68
CDA2	YLR308W	PEP5	P12868	1029 aa		4.54	□□□□□ -1.68
CDA2	YLR308W	SHP1	P34223	423 aa		4.54	□□□□□ -1.68
CDA2	YLR308W	MIC60	P36112	540 aa		4.54	□□□□□ -1.68
CDA2	YLR308W	YAT2	P40017	923 aa		4.54	□□□□□ -1.68
CDA2	YLR308W	HXT9	P40885	567 aa		4.54	□□□□□ -1.68
CDA2	YLR308W	SNG1	P46950	547 aa		4.54	□□□□□ -1.68
CDA2	YLR308W	SOL4	P53315	255 aa		4.54	□□□□□ -1.68
CDA2	YLR308W	APL5	Q08951	932 aa	Known RBP	4.54	□□□□□ -1.68
CDA2	YLR308W	YDL007C-A	Q2V2Q0	85 aa		4.54	□□□□□ -1.68
CDA2	YLR308W	PDX1	P16451	410 aa		4.53	□□□□□ -1.68
CDA2	YLR308W	MTR2	P34232	184 aa	Known RBP	4.53	□□□□□ -1.68
CDA2	YLR308W	PEX5	P35056	612 aa		4.53	□□□□□ -1.68
CDA2	YLR308W	RKM3	P38222	552 aa		4.53	□□□□□ -1.68
CDA2	YLR308W	YHR210C	P38893	341 aa		4.53	□□□□□ -1.68
CDA2	YLR308W	YND1	P40009	630 aa		4.53	□□□□□ -1.68
CDA2	YLR308W	YIL060W	P40519	144 aa		4.53	□□□□□ -1.68
CDA2	YLR308W	SSU1	P41930	458 aa		4.53	□□□□□ -1.68
CDA2	YLR308W	SAD1	P43589	448 aa		4.53	□□□□□ -1.68
CDA2	YLR308W	URB2	P47108	1174 aa		4.53	□□□□□ -1.68
CDA2	YLR308W	MNP1	P53163	194 aa	Predicted RBP	4.53	□□□□□ -1.68
CDA2	YLR308W	CUL3	P53202	744 aa		4.53	□□□□□ -1.68
CDA2	YLR308W	SMM1	P53720	384 aa	Known RBP	4.53	□□□□□ -1.68
CDA2	YLR308W	YVH1	Q02256	364 aa	Known RBP	4.53	□□□□□ -1.68
CDA2	YLR308W	PDS5	Q04264	1277 aa		4.53	□□□□□ -1.68
CDA2	YLR308W	ADE13	Q05911	482 aa	Known RBP	4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 107.7 ms