RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	PHO90	P39535	881 aa		5.57	□□□□□ -1.52
RSA3	YLR221C	XBP1	P40489	647 aa		5.57	□□□□□ -1.52
RSA3	YLR221C	YIL060W	P40519	144 aa		5.57	□□□□□ -1.52
RSA3	YLR221C	YML6	P51998	286 aa		5.57	□□□□□ -1.52
RSA3	YLR221C	RMT2	Q03305	412 aa		5.57	□□□□□ -1.52
RSA3	YLR221C	VTA1	Q06263	330 aa		5.57	□□□□□ -1.52
RSA3	YLR221C	YDL218W	Q07629	317 aa		5.57	□□□□□ -1.52
RSA3	YLR221C	SMC6	Q12749	1114 aa		5.57	□□□□□ -1.52
RSA3	YLR221C	YKL023W	P36103	277 aa	Known RBP	5.56	□□□□□ -1.52
RSA3	YLR221C	ROT2	P38138	954 aa		5.56	□□□□□ -1.52
RSA3	YLR221C	YJL068C	P40363	299 aa		5.56	□□□□□ -1.52
RSA3	YLR221C	HXT9	P40885	567 aa		5.56	□□□□□ -1.52
RSA3	YLR221C	DUG3	P53871	357 aa		5.56	□□□□□ -1.52
RSA3	YLR221C	YMR160W	Q03823	816 aa		5.56	□□□□□ -1.52
RSA3	YLR221C	YDR131C	Q03899	556 aa		5.56	□□□□□ -1.52
RSA3	YLR221C	COQ9	Q05779	260 aa		5.56	□□□□□ -1.52
RSA3	YLR221C	ECI1	Q05871	280 aa		5.56	□□□□□ -1.52
RSA3	YLR221C	RDR1	Q08904	546 aa		5.56	□□□□□ -1.52
RSA3	YLR221C	ISA2	Q12425	185 aa		5.56	□□□□□ -1.52
RSA3	YLR221C	EDE1	P34216	1381 aa		5.55	□□□□□ -1.52
RSA3	YLR221C	ADK2	P26364	225 aa		5.55	□□□□□ -1.52
RSA3	YLR221C	LAG1	P38703	411 aa		5.55	□□□□□ -1.52
RSA3	YLR221C	DLD2	P46681	530 aa	Known RBP	5.55	□□□□□ -1.52
RSA3	YLR221C	SNG1	P46950	547 aa		5.55	□□□□□ -1.52
RSA3	YLR221C	RSC1	P53236	928 aa		5.55	□□□□□ -1.52
RSA3	YLR221C	CAF130	P53280	1122 aa	Predicted RBP	5.55	□□□□□ -1.52
RSA3	YLR221C	SOL4	P53315	255 aa		5.55	□□□□□ -1.52
RSA3	YLR221C	YNL234W	P53857	426 aa		5.55	□□□□□ -1.52
RSA3	YLR221C	ATX2	Q12067	313 aa		5.55	□□□□□ -1.52
RSA3	YLR221C	ICT1	Q12385	394 aa		5.55	□□□□□ -1.52
RSA3	YLR221C	YRF1-4	O13559	1382 aa		5.55	□□□□□ -1.52
RSA3	YLR221C	SHP1	P34223	423 aa		5.54	□□□□□ -1.52
RSA3	YLR221C	FLO5	P38894	1075 aa		5.54	□□□□□ -1.52
RSA3	YLR221C	MNP1	P53163	194 aa	Predicted RBP	5.54	□□□□□ -1.52
RSA3	YLR221C	SMM1	P53720	384 aa	Known RBP	5.54	□□□□□ -1.52
RSA3	YLR221C	YDL057W	Q07379	328 aa		5.54	□□□□□ -1.52
RSA3	YLR221C	YAP7	Q08182	245 aa		5.54	□□□□□ -1.52
RSA3	YLR221C	CBP1	P07252	654 aa		5.53	□□□□□ -1.52
RSA3	YLR221C	RPL31B	P0C2H9	113 aa	Known RBP	5.53	□□□□□ -1.52
RSA3	YLR221C	HOM3	P10869	527 aa		5.53	□□□□□ -1.52
RSA3	YLR221C	PRP2	P20095	876 aa	Predicted RBP	5.53	□□□□□ -1.52
RSA3	YLR221C	YCR051W	P25631	222 aa		5.53	□□□□□ -1.52
RSA3	YLR221C	SNC1	P31109	117 aa		5.53	□□□□□ -1.52
RSA3	YLR221C	LEU5	P38702	357 aa		5.53	□□□□□ -1.52
RSA3	YLR221C	YHR210C	P38893	341 aa		5.53	□□□□□ -1.52
RSA3	YLR221C	YMR124W	P39523	943 aa	Known RBP	5.53	□□□□□ -1.52
RSA3	YLR221C	BNA3	P47039	444 aa	Known RBP	5.53	□□□□□ -1.52
RSA3	YLR221C	YNL181W	P53878	407 aa		5.53	□□□□□ -1.52
RSA3	YLR221C	RPA49	Q01080	415 aa	Predicted RBP	5.53	□□□□□ -1.52
RSA3	YLR221C	YVH1	Q02256	364 aa	Known RBP	5.53	□□□□□ -1.52
RSA3	YLR221C	SHR3	Q02774	210 aa		5.53	□□□□□ -1.52
RSA3	YLR221C	YLR112W	Q12130	139 aa		5.53	□□□□□ -1.52
RSA3	YLR221C	BRR1	Q99177	341 aa	Predicted RBP	5.53	□□□□□ -1.52
RSA3	YLR221C	PEP4	P07267	405 aa	Known RBP	5.52	□□□□□ -1.53
RSA3	YLR221C	PEP5	P12868	1029 aa		5.52	□□□□□ -1.53
RSA3	YLR221C	RPL3	P14126	387 aa	Known RBP	5.52	□□□□□ -1.53
RSA3	YLR221C	PTP1	P25044	335 aa		5.52	□□□□□ -1.53
RSA3	YLR221C	ELO2	P25358	347 aa		5.52	□□□□□ -1.53
RSA3	YLR221C	BUD14	P27637	709 aa		5.52	□□□□□ -1.53
RSA3	YLR221C	HCS1	P34243	683 aa		5.52	□□□□□ -1.53
RSA3	YLR221C	STB6	P36085	766 aa		5.52	□□□□□ -1.53
RSA3	YLR221C	AIM22	P47051	409 aa		5.52	□□□□□ -1.53
RSA3	YLR221C	PKP2	P53170	491 aa		5.52	□□□□□ -1.53
RSA3	YLR221C	SSK1	Q07084	712 aa		5.52	□□□□□ -1.53
RSA3	YLR221C	GSH2	Q08220	491 aa		5.52	□□□□□ -1.53
RSA3	YLR221C	THP1	Q08231	455 aa		5.52	□□□□□ -1.53
RSA3	YLR221C	NCE102	Q12207	173 aa	RIP-Chip data	5.52	□□□□□ -1.53	not detected
RSA3	YLR221C	YER190C-B	P0CX94	160 aa		5.51	□□□□□ -1.53
RSA3	YLR221C	YEL077W-A	P0CX95	160 aa		5.51	□□□□□ -1.53
RSA3	YLR221C	YGR296C-B	P0CX96	160 aa		5.51	□□□□□ -1.53
RSA3	YLR221C	YPL283W-B	P0CX97	160 aa		5.51	□□□□□ -1.53
RSA3	YLR221C	YPR204C-A	P0CX98	160 aa		5.51	□□□□□ -1.53
RSA3	YLR221C	AIM17	P23180	465 aa	Known RBP	5.51	□□□□□ -1.53
RSA3	YLR221C	GID7	P25569	745 aa		5.51	□□□□□ -1.53
RSA3	YLR221C	GCS1	P35197	352 aa		5.51	□□□□□ -1.53
RSA3	YLR221C	YPK3	P38070	525 aa		5.51	□□□□□ -1.53
RSA3	YLR221C	IAH1	P41734	238 aa		5.51	□□□□□ -1.53
RSA3	YLR221C	OGG1	P53397	376 aa	Predicted RBP	5.51	□□□□□ -1.53
RSA3	YLR221C	MRPL1	Q04599	285 aa		5.51	□□□□□ -1.53
RSA3	YLR221C	ERB1	Q04660	807 aa	Known RBP	5.51	□□□□□ -1.53
RSA3	YLR221C	YLR352W	Q06479	807 aa		5.51	□□□□□ -1.53
RSA3	YLR221C	YPR089W	O13585	888 aa		5.5	□□□□□ -1.53
RSA3	YLR221C	COR1	P07256	457 aa		5.5	□□□□□ -1.53
RSA3	YLR221C	PMS1	P14242	873 aa		5.5	□□□□□ -1.53
RSA3	YLR221C	RAD14	P28519	371 aa		5.5	□□□□□ -1.53
RSA3	YLR221C	HXT3	P32466	567 aa	Known RBP	5.5	□□□□□ -1.53
RSA3	YLR221C	TMT1	P32643	299 aa		5.5	□□□□□ -1.53
RSA3	YLR221C	BLI1	P35727	113 aa		5.5	□□□□□ -1.53
RSA3	YLR221C	ATG27	P46989	271 aa		5.5	□□□□□ -1.53
RSA3	YLR221C	RPL15B	P54780	204 aa	Predicted RBP	5.5	□□□□□ -1.53
RSA3	YLR221C	STP1	Q00947	519 aa		5.5	□□□□□ -1.53
RSA3	YLR221C	IZH1	Q03419	316 aa		5.5	□□□□□ -1.53
RSA3	YLR221C	RBS1	Q05672	457 aa	Known RBP	5.5	□□□□□ -1.53
RSA3	YLR221C	YOR365C	Q08844	703 aa		5.5	□□□□□ -1.53
RSA3	YLR221C	RAV1	P47104	1357 aa		5.5	□□□□□ -1.53
RSA3	YLR221C	CLB1	P24868	471 aa		5.49	□□□□□ -1.53
RSA3	YLR221C	CDC60	P26637	1090 aa	Known RBP	5.49	□□□□□ -1.53
RSA3	YLR221C	MBB1	P39534	108 aa		5.49	□□□□□ -1.53
RSA3	YLR221C	NET1	P47035	1189 aa		5.49	□□□□□ -1.53
RSA3	YLR221C	ALT2	P52892	507 aa		5.49	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms