RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKR040C	YKR040C	YDR061W	Q12298	539 aa		11.34	□□□□□ -0.59
YKR040C	YKR040C	CMR1	Q12510	522 aa	Known RBP	11.34	□□□□□ -0.59
YKR040C	YKR040C	YKL068W-A	Q3E826	78 aa		11.34	□□□□□ -0.59
YKR040C	YKR040C	STE3	P06783	470 aa		11.33	□□□□□ -0.6
YKR040C	YKR040C	LAT1	P12695	482 aa	Known RBP	11.33	□□□□□ -0.6
YKR040C	YKR040C	CMP2	P14747	604 aa		11.33	□□□□□ -0.6
YKR040C	YKR040C	SRV2	P17555	526 aa	Known RBP	11.33	□□□□□ -0.6
YKR040C	YKR040C	ARG1	P22768	420 aa		11.33	□□□□□ -0.6
YKR040C	YKR040C	HOG1	P32485	435 aa		11.33	□□□□□ -0.6
YKR040C	YKR040C	SFC1	P33303	322 aa		11.33	□□□□□ -0.6
YKR040C	YKR040C	PTH2	P34222	208 aa		11.33	□□□□□ -0.6
YKR040C	YKR040C	VRP1	P37370	817 aa		11.33	□□□□□ -0.6
YKR040C	YKR040C	RIM2	P38127	377 aa		11.33	□□□□□ -0.6
YKR040C	YKR040C	EMP65	P40085	556 aa		11.33	□□□□□ -0.6
YKR040C	YKR040C	FAR3	P46671	204 aa		11.33	□□□□□ -0.6
YKR040C	YKR040C	YJR030C	P47101	745 aa		11.33	□□□□□ -0.6
YKR040C	YKR040C	PAN2	P53010	1115 aa	Predicted RBP	11.33	□□□□□ -0.6
YKR040C	YKR040C	RCF2	P53721	224 aa		11.33	□□□□□ -0.6
YKR040C	YKR040C	RNT1	Q02555	471 aa		11.33	□□□□□ -0.6
YKR040C	YKR040C	DIC1	Q06143	298 aa		11.33	□□□□□ -0.6
YKR040C	YKR040C	DIN7	Q12086	430 aa		11.33	□□□□□ -0.6
YKR040C	YKR040C	ATG29	Q12092	213 aa		11.33	□□□□□ -0.6
YKR040C	YKR040C	RGT2	Q12300	763 aa		11.33	□□□□□ -0.6
YKR040C	YKR040C	YIL046W-A	Q3E7Z4	54 aa		11.33	□□□□□ -0.6
YKR040C	YKR040C	STT4	P37297	1900 aa		11.33	□□□□□ -0.6
YKR040C	YKR040C	BRR2	P32639	2163 aa	Known RBP	11.33	□□□□□ -0.6
YKR040C	YKR040C	CRM1	P30822	1084 aa	Known RBP	11.32	□□□□□ -0.6
YKR040C	YKR040C	DMA1	P38823	416 aa		11.32	□□□□□ -0.6
YKR040C	YKR040C	NDE1	P40215	560 aa		11.32	□□□□□ -0.6
YKR040C	YKR040C	PRM2	P40534	656 aa		11.32	□□□□□ -0.6
YKR040C	YKR040C	STB2	P46679	850 aa		11.32	□□□□□ -0.6
YKR040C	YKR040C	AIF1	P52923	378 aa		11.32	□□□□□ -0.6
YKR040C	YKR040C	TEL2	P53038	688 aa		11.32	□□□□□ -0.6
YKR040C	YKR040C	YNL260C	P53846	198 aa		11.32	□□□□□ -0.6
YKR040C	YKR040C	IBD2	P53892	351 aa		11.32	□□□□□ -0.6
YKR040C	YKR040C	FAR8	Q05040	523 aa		11.32	□□□□□ -0.6
YKR040C	YKR040C	RIF2	Q06208	395 aa		11.32	□□□□□ -0.6
YKR040C	YKR040C	RRP42	Q12277	265 aa	Predicted RBP	11.32	□□□□□ -0.6
YKR040C	YKR040C	SRN2	Q99176	213 aa		11.32	□□□□□ -0.6
YKR040C	YKR040C	BRR1	Q99177	341 aa	Predicted RBP	11.32	□□□□□ -0.6
YKR040C	YKR040C	FUR1	P18562	216 aa	Known RBP	11.31	□□□□□ -0.6
YKR040C	YKR040C	VAC17	P25591	423 aa		11.31	□□□□□ -0.6
YKR040C	YKR040C	FMP46	P36141	133 aa	Known RBP	11.31	□□□□□ -0.6
YKR040C	YKR040C	PLB1	P39105	664 aa		11.31	□□□□□ -0.6
YKR040C	YKR040C	YHB1	P39676	399 aa	Known RBP	11.31	□□□□□ -0.6
YKR040C	YKR040C	PFK26	P40433	827 aa	Known RBP	11.31	□□□□□ -0.6
YKR040C	YKR040C	YJL049W	P47048	450 aa		11.31	□□□□□ -0.6
YKR040C	YKR040C	ERG26	P53199	349 aa	Known RBP	11.31	□□□□□ -0.6
YKR040C	YKR040C	UBX4	P54730	416 aa		11.31	□□□□□ -0.6
YKR040C	YKR040C	BSC6	Q08280	497 aa		11.31	□□□□□ -0.6
YKR040C	YKR040C	NCA2	Q12374	616 aa		11.31	□□□□□ -0.6
YKR040C	YKR040C	YLR111W	Q12528	110 aa		11.31	□□□□□ -0.6
YKR040C	YKR040C	GUK1	P15454	187 aa	Known RBP	11.3	□□□□□ -0.6
YKR040C	YKR040C	HOP1	P20050	605 aa		11.3	□□□□□ -0.6
YKR040C	YKR040C	DAL82	P21705	255 aa		11.3	□□□□□ -0.6
YKR040C	YKR040C	PTP1	P25044	335 aa		11.3	□□□□□ -0.6
YKR040C	YKR040C	HEM3	P28789	327 aa		11.3	□□□□□ -0.6
YKR040C	YKR040C	RRN3	P36070	627 aa		11.3	□□□□□ -0.6
YKR040C	YKR040C	COA1	P40452	197 aa		11.3	□□□□□ -0.6
YKR040C	YKR040C	MTQ2	Q03920	221 aa	Predicted RBP	11.3	□□□□□ -0.6
YKR040C	YKR040C	RAD34	Q06665	692 aa		11.3	□□□□□ -0.6
YKR040C	YKR040C	YOL036W	Q08206	761 aa		11.3	□□□□□ -0.6
YKR040C	YKR040C	YOR114W	Q12219	294 aa		11.3	□□□□□ -0.6
YKR040C	YKR040C	BMT6	Q12291	365 aa		11.3	□□□□□ -0.6
YKR040C	YKR040C	SPE4	Q12455	300 aa		11.3	□□□□□ -0.6
YKR040C	YKR040C	MST1	P07236	462 aa		11.29	□□□□□ -0.6
YKR040C	YKR040C	KIN2	P13186	1147 aa	Known RBP	11.29	□□□□□ -0.6
YKR040C	YKR040C	ART10	P18634	518 aa	Known RBP	11.29	□□□□□ -0.6
YKR040C	YKR040C	STE4	P18851	423 aa		11.29	□□□□□ -0.6
YKR040C	YKR040C	YCR051W	P25631	222 aa		11.29	□□□□□ -0.6
YKR040C	YKR040C	MCM5	P29496	775 aa	Known RBP	11.29	□□□□□ -0.6
YKR040C	YKR040C	UTP9	P38882	575 aa	Known RBP	11.29	□□□□□ -0.6
YKR040C	YKR040C	RGA1	P39083	1007 aa		11.29	□□□□□ -0.6
YKR040C	YKR040C	ALK1	P43633	760 aa	Known RBP	11.29	□□□□□ -0.6
YKR040C	YKR040C	LSM3	P57743	89 aa	Known RBP	11.29	□□□□□ -0.6
YKR040C	YKR040C	VHS1	Q03785	461 aa		11.29	□□□□□ -0.6
YKR040C	YKR040C	SIZ1	Q04195	904 aa		11.29	□□□□□ -0.6
YKR040C	YKR040C	IOC2	Q12072	812 aa		11.29	□□□□□ -0.6
YKR040C	YKR040C	YPR011C	Q12251	326 aa		11.29	□□□□□ -0.6
YKR040C	YKR040C	AHA1	Q12449	350 aa	Known RBP	11.29	□□□□□ -0.6
YKR040C	YKR040C	LAG2	Q92325	660 aa		11.29	□□□□□ -0.6
YKR040C	YKR040C	HFA1	P32874	2273 aa		11.28	□□□□□ -0.6
YKR040C	YKR040C	RPS4A	P0CX35	261 aa	Known RBP	11.28	□□□□□ -0.6
YKR040C	YKR040C	RPS4B	P0CX36	261 aa	Known RBP	11.28	□□□□□ -0.6
YKR040C	YKR040C	NMT1	P14743	455 aa		11.28	□□□□□ -0.6
YKR040C	YKR040C	PDC5	P16467	563 aa	Known RBP	11.28	□□□□□ -0.6
YKR040C	YKR040C	NTH1	P32356	751 aa		11.28	□□□□□ -0.6
YKR040C	YKR040C	SQT1	P35184	431 aa		11.28	□□□□□ -0.6
YKR040C	YKR040C	YHL008C	P38750	627 aa		11.28	□□□□□ -0.6
YKR040C	YKR040C	ARC1	P46672	376 aa	Known RBP	11.28	□□□□□ -0.6
YKR040C	YKR040C	KXD1	P53158	218 aa		11.28	□□□□□ -0.6
YKR040C	YKR040C	ESF2	P53743	316 aa	Known RBP	11.28	□□□□□ -0.6
YKR040C	YKR040C	RRN11	Q04712	507 aa		11.28	□□□□□ -0.6
YKR040C	YKR040C	RRP45	Q05636	305 aa	Known RBP	11.28	□□□□□ -0.6
YKR040C	YKR040C	YOR223W	Q12015	292 aa		11.28	□□□□□ -0.6
YKR040C	YKR040C	YOL107W	Q12239	342 aa		11.28	□□□□□ -0.6
YKR040C	YKR040C	RHO2	P06781	192 aa		11.27	□□□□□ -0.61
YKR040C	YKR040C	SPT3	P06844	337 aa		11.27	□□□□□ -0.61
YKR040C	YKR040C	GAL7	P08431	366 aa		11.27	□□□□□ -0.61
YKR040C	YKR040C	HSC82	P15108	705 aa	Known RBP	11.27	□□□□□ -0.61

Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms