RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C GMC2Q06201 188 aa2.13□□□□□ -2.07
UFD4YKL010C SWC7Q06707 132 aa2.13□□□□□ -2.07
UFD4YKL010C THI20Q08224 551 aa2.13□□□□□ -2.07
UFD4YKL010C DIA2Q08496 732 aaPredicted RBP2.13□□□□□ -2.07
UFD4YKL010C TRM8Q12009 286 aa2.13□□□□□ -2.07
UFD4YKL010C NUS1Q12063 375 aa2.13□□□□□ -2.07
UFD4YKL010C YLL054CQ12244 843 aa2.13□□□□□ -2.07
UFD4YKL010C HER1Q12276 1246 aa2.13□□□□□ -2.07
UFD4YKL010C EFG1Q3E705 233 aaKnown RBP2.13□□□□□ -2.07
UFD4YKL010C ADY2P25613 283 aa2.13□□□□□ -2.07
UFD4YKL010C YBR225WP38321 900 aa2.13□□□□□ -2.07
UFD4YKL010C SEC31P38968 1273 aaKnown RBP2.13□□□□□ -2.07
UFD4YKL010C VAC8P39968 578 aa2.13□□□□□ -2.07
UFD4YKL010C KRE29P40026 464 aa2.13□□□□□ -2.07
UFD4YKL010C SEC26P41810 973 aaKnown RBP2.13□□□□□ -2.07
UFD4YKL010C SKP2P42843 763 aa2.13□□□□□ -2.07
UFD4YKL010C LSB6P42951 607 aa2.13□□□□□ -2.07
UFD4YKL010C RPS10BP46784 105 aaKnown RBP2.13□□□□□ -2.07
UFD4YKL010C BNA3P47039 444 aaKnown RBP2.13□□□□□ -2.07
UFD4YKL010C YJL055WP47044 245 aa2.13□□□□□ -2.07
UFD4YKL010C MCM6P53091 1017 aaKnown RBP2.13□□□□□ -2.07
UFD4YKL010C DCP2P53550 970 aaKnown RBP2.13□□□□□ -2.07
UFD4YKL010C SQS1P53866 767 aaKnown RBP2.13□□□□□ -2.07
UFD4YKL010C CDC14Q00684 551 aa2.13□□□□□ -2.07
UFD4YKL010C YKR005CQ02203 525 aa2.13□□□□□ -2.07
UFD4YKL010C IRC15Q02733 499 aa2.13□□□□□ -2.07
UFD4YKL010C FMP30Q02883 468 aa2.13□□□□□ -2.07
UFD4YKL010C YLR455WQ06188 304 aa2.13□□□□□ -2.07
UFD4YKL010C BRE4Q07660 1125 aa2.13□□□□□ -2.07
UFD4YKL010C AAD4Q07747 329 aa2.13□□□□□ -2.07
UFD4YKL010C IRC10Q08118 586 aa2.13□□□□□ -2.07
UFD4YKL010C RPS10AQ08745 105 aaPredicted RBP2.13□□□□□ -2.07
UFD4YKL010C MUM3Q08750 479 aa2.13□□□□□ -2.07
UFD4YKL010C APC9Q12107 265 aa2.13□□□□□ -2.07
UFD4YKL010C MRH1Q12117 320 aaPredicted RBP2.13□□□□□ -2.07
UFD4YKL010C HXK2P04807 486 aaKnown RBP2.12□□□□□ -2.07
UFD4YKL010C RHO1P06780 209 aaKnown RBP2.12□□□□□ -2.07
UFD4YKL010C COR1P07256 457 aa2.12□□□□□ -2.07
UFD4YKL010C HSF1P10961 833 aa2.12□□□□□ -2.07
UFD4YKL010C SNF4P12904 322 aa2.12□□□□□ -2.07
UFD4YKL010C UBA1P22515 1024 aaKnown RBP2.12□□□□□ -2.07
UFD4YKL010C DPB2P24482 689 aaPredicted RBP2.12□□□□□ -2.07
UFD4YKL010C YSP3P25036 478 aa2.12□□□□□ -2.07
UFD4YKL010C CIN8P27895 1000 aa2.12□□□□□ -2.07
UFD4YKL010C PTP2P29461 750 aa2.12□□□□□ -2.07
UFD4YKL010C DEF1P35732 738 aaKnown RBP2.12□□□□□ -2.07
UFD4YKL010C PDX3P38075 228 aaKnown RBP2.12□□□□□ -2.07
UFD4YKL010C LDB7P38210 180 aa2.12□□□□□ -2.07
UFD4YKL010C YHR112CP38716 378 aa2.12□□□□□ -2.07
UFD4YKL010C STN1P38960 494 aa2.12□□□□□ -2.07
UFD4YKL010C GEM1P39722 662 aa2.12□□□□□ -2.07
UFD4YKL010C RPT2P40327 437 aaKnown RBP2.12□□□□□ -2.07
UFD4YKL010C FKH2P41813 862 aa2.12□□□□□ -2.07
UFD4YKL010C MAF1P41910 395 aa2.12□□□□□ -2.07
UFD4YKL010C STB1P42845 420 aa2.12□□□□□ -2.07
UFD4YKL010C EMC2P47133 292 aaKnown RBP2.12□□□□□ -2.07
UFD4YKL010C EXG2P52911 562 aa2.12□□□□□ -2.07
UFD4YKL010C AIF1P52923 378 aa2.12□□□□□ -2.07
UFD4YKL010C BOL2P53082 120 aa2.12□□□□□ -2.07
UFD4YKL010C PET117Q02771 107 aa2.12□□□□□ -2.07
UFD4YKL010C GRX3Q03835 250 aa2.12□□□□□ -2.07
UFD4YKL010C PMT7Q06644 662 aa2.12□□□□□ -2.07
UFD4YKL010C HBT1Q07653 1046 aaKnown RBP2.12□□□□□ -2.07
UFD4YKL010C MCA1Q08601 432 aa2.12□□□□□ -2.07
UFD4YKL010C YOR012WQ12351 137 aa2.12□□□□□ -2.07
UFD4YKL010C MED11Q99278 115 aa2.12□□□□□ -2.07
UFD4YKL010C RPL24AP04449 155 aaKnown RBP2.12□□□□□ -2.07
UFD4YKL010C BCY1P07278 416 aaKnown RBP2.12□□□□□ -2.07
UFD4YKL010C SPE1P08432 466 aa2.12□□□□□ -2.07
UFD4YKL010C RPC19P28000 142 aaKnown RBP2.12□□□□□ -2.07
UFD4YKL010C SSE1P32589 693 aaKnown RBP2.12□□□□□ -2.07
UFD4YKL010C GDH2P33327 1092 aaKnown RBP2.12□□□□□ -2.07
UFD4YKL010C NTR2P36118 322 aaPredicted RBP2.12□□□□□ -2.07
UFD4YKL010C SIF2P38262 535 aa2.12□□□□□ -2.07
UFD4YKL010C TSL1P38427 1098 aaKnown RBP2.12□□□□□ -2.07
UFD4YKL010C TDA11P38854 504 aa2.12□□□□□ -2.07
UFD4YKL010C FAA3P39002 694 aa2.12□□□□□ -2.07
UFD4YKL010C NTA1P40354 457 aa2.12□□□□□ -2.07
UFD4YKL010C MPM1P40364 252 aa2.12□□□□□ -2.07
UFD4YKL010C OPT1P40897 799 aa2.12□□□□□ -2.07
UFD4YKL010C GTS1P40956 396 aa2.12□□□□□ -2.07
UFD4YKL010C BNA6P43619 295 aa2.12□□□□□ -2.07
UFD4YKL010C GCV2P49095 1034 aa2.12□□□□□ -2.07
UFD4YKL010C RMI1Q02685 241 aa2.12□□□□□ -2.07
UFD4YKL010C YLR446WQ06204 433 aa2.12□□□□□ -2.07
UFD4YKL010C TRE2Q08693 809 aa2.12□□□□□ -2.07
UFD4YKL010C RRP42Q12277 265 aaPredicted RBP2.12□□□□□ -2.07
UFD4YKL010C MDY2Q12285 212 aa2.12□□□□□ -2.07
UFD4YKL010C RTN2Q12443 393 aa2.12□□□□□ -2.07
UFD4YKL010C ADE4P04046 510 aaKnown RBP2.12□□□□□ -2.07
UFD4YKL010C ARG80P07249 177 aa2.12□□□□□ -2.07
UFD4YKL010C PET122P10355 254 aa2.12□□□□□ -2.07
UFD4YKL010C HAP4P14064 554 aa2.12□□□□□ -2.07
UFD4YKL010C MET16P18408 261 aaPredicted RBP2.12□□□□□ -2.07
UFD4YKL010C YIH1P25637 258 aa2.12□□□□□ -2.07
UFD4YKL010C BUB2P26448 306 aaPredicted RBP2.12□□□□□ -2.07
UFD4YKL010C CCR4P31384 837 aaKnown RBP2.12□□□□□ -2.07
UFD4YKL010C TIP20P33891 701 aa2.12□□□□□ -2.07
UFD4YKL010C TSA1P34760 196 aaKnown RBP2.12□□□□□ -2.07
UFD4YKL010C SSZ1P38788 538 aaKnown RBP2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms