RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W UBP11P36026 717 aa2.28□□□□□ -2.04
MSL1YIR009W DED81P38707 554 aaKnown RBP2.28□□□□□ -2.04
MSL1YIR009W YIR014WP40570 242 aa2.28□□□□□ -2.04
MSL1YIR009W SSU1P41930 458 aa2.28□□□□□ -2.04
MSL1YIR009W FET5P43561 622 aa2.28□□□□□ -2.04
MSL1YIR009W ART5P53244 586 aaKnown RBP2.28□□□□□ -2.04
MSL1YIR009W RMT2Q03305 412 aa2.28□□□□□ -2.04
MSL1YIR009W YDR239CQ03780 787 aa2.28□□□□□ -2.04
MSL1YIR009W GYL1Q04322 720 aa2.28□□□□□ -2.04
MSL1YIR009W PSR1Q07800 427 aa2.28□□□□□ -2.04
MSL1YIR009W RSA1Q08932 381 aa2.28□□□□□ -2.04
MSL1YIR009W NMD4Q12129 218 aa2.28□□□□□ -2.04
MSL1YIR009W SFI1Q12369 946 aa2.28□□□□□ -2.04
MSL1YIR009W SPE4Q12455 300 aa2.28□□□□□ -2.04
MSL1YIR009W PGA3Q12746 312 aaKnown RBP2.28□□□□□ -2.04
MSL1YIR009W YOL159C-AQ3E769 90 aa2.28□□□□□ -2.04
MSL1YIR009W GEA2P39993 1459 aaKnown RBP2.27□□□□□ -2.05
MSL1YIR009W SGS1P35187 1447 aa2.27□□□□□ -2.05
MSL1YIR009W EDE1P34216 1381 aa2.27□□□□□ -2.05
MSL1YIR009W SPT7P35177 1332 aa2.27□□□□□ -2.05
MSL1YIR009W GAL80P04387 435 aa2.27□□□□□ -2.05
MSL1YIR009W ARD1P07347 238 aaPredicted RBP2.27□□□□□ -2.05
MSL1YIR009W CLB2P24869 491 aa2.27□□□□□ -2.05
MSL1YIR009W CPR3P25719 182 aa2.27□□□□□ -2.05
MSL1YIR009W APE3P37302 537 aaKnown RBP2.27□□□□□ -2.05
MSL1YIR009W AGP2P38090 596 aa2.27□□□□□ -2.05
MSL1YIR009W CST26P38226 397 aa2.27□□□□□ -2.05
MSL1YIR009W MUM2P38236 366 aa2.27□□□□□ -2.05
MSL1YIR009W LSM5P40089 93 aaKnown RBP2.27□□□□□ -2.05
MSL1YIR009W RGI2P40188 164 aa2.27□□□□□ -2.05
MSL1YIR009W YJL068CP40363 299 aa2.27□□□□□ -2.05
MSL1YIR009W SWP82P43554 623 aa2.27□□□□□ -2.05
MSL1YIR009W RCF1Q03713 159 aa2.27□□□□□ -2.05
MSL1YIR009W SMA2Q04658 369 aa2.27□□□□□ -2.05
MSL1YIR009W AIM32Q04689 311 aa2.27□□□□□ -2.05
MSL1YIR009W YEH1Q07804 573 aa2.27□□□□□ -2.05
MSL1YIR009W TLG2Q08144 397 aa2.27□□□□□ -2.05
MSL1YIR009W YPT6Q99260 215 aa2.27□□□□□ -2.05
MSL1YIR009W MMS1Q06211 1407 aa2.26□□□□□ -2.05
MSL1YIR009W NAT1P12945 854 aaKnown RBP2.26□□□□□ -2.05
MSL1YIR009W GLN3P18494 730 aa2.26□□□□□ -2.05
MSL1YIR009W MNE1P24720 663 aa2.26□□□□□ -2.05
MSL1YIR009W CLB3P24870 427 aa2.26□□□□□ -2.05
MSL1YIR009W YIH1P25637 258 aa2.26□□□□□ -2.05
MSL1YIR009W PRO3P32263 286 aaKnown RBP2.26□□□□□ -2.05
MSL1YIR009W SAC1P32368 623 aaKnown RBP2.26□□□□□ -2.05
MSL1YIR009W STB6P36085 766 aa2.26□□□□□ -2.05
MSL1YIR009W NTR2P36118 322 aaPredicted RBP2.26□□□□□ -2.05
MSL1YIR009W APE4P38821 490 aa2.26□□□□□ -2.05
MSL1YIR009W UTP9P38882 575 aaKnown RBP2.26□□□□□ -2.05
MSL1YIR009W SMF1P38925 575 aa2.26□□□□□ -2.05
MSL1YIR009W LCB2P40970 561 aa2.26□□□□□ -2.05
MSL1YIR009W CTK2P46962 323 aa2.26□□□□□ -2.05
MSL1YIR009W YTP1P53584 459 aa2.26□□□□□ -2.05
MSL1YIR009W IPI3P53877 555 aa2.26□□□□□ -2.05
MSL1YIR009W ZDS2P54786 942 aa2.26□□□□□ -2.05
MSL1YIR009W YMR178WQ03219 274 aaKnown RBP2.26□□□□□ -2.05
MSL1YIR009W RSM28Q03430 361 aa2.26□□□□□ -2.05
MSL1YIR009W YDR415CQ04033 374 aaPredicted RBP2.26□□□□□ -2.05
MSL1YIR009W VPS38Q05919 439 aa2.26□□□□□ -2.05
MSL1YIR009W CSR2Q12734 1121 aa2.26□□□□□ -2.05
MSL1YIR009W PEP1P32319 1579 aa2.26□□□□□ -2.05
MSL1YIR009W BUD4P47136 1447 aa2.25□□□□□ -2.05
MSL1YIR009W TY1B-DR4Q07793 1604 aa2.25□□□□□ -2.05
MSL1YIR009W THO2P53552 1597 aaKnown RBP2.25□□□□□ -2.05
MSL1YIR009W HXK2P04807 486 aaKnown RBP2.25□□□□□ -2.05
MSL1YIR009W RAP1P11938 827 aa2.25□□□□□ -2.05
MSL1YIR009W RPL3P14126 387 aaKnown RBP2.25□□□□□ -2.05
MSL1YIR009W GID7P25569 745 aa2.25□□□□□ -2.05
MSL1YIR009W NPL6P32832 435 aa2.25□□□□□ -2.05
MSL1YIR009W SOF1P33750 489 aaKnown RBP2.25□□□□□ -2.05
MSL1YIR009W LHS1P36016 881 aa2.25□□□□□ -2.05
MSL1YIR009W AAP1P37898 856 aaKnown RBP2.25□□□□□ -2.05
MSL1YIR009W VID24P38263 362 aa2.25□□□□□ -2.05
MSL1YIR009W YHR218WP38899 603 aa2.25□□□□□ -2.05
MSL1YIR009W MRX1P40050 688 aa2.25□□□□□ -2.05
MSL1YIR009W MET18P40469 1032 aa2.25□□□□□ -2.05
MSL1YIR009W AZF1P41696 914 aa2.25□□□□□ -2.05
MSL1YIR009W ZIM17P42844 174 aa2.25□□□□□ -2.05
MSL1YIR009W YFR020WP43600 232 aa2.25□□□□□ -2.05
MSL1YIR009W IMD4P50094 524 aaKnown RBP2.25□□□□□ -2.05
MSL1YIR009W YML6P51998 286 aa2.25□□□□□ -2.05
MSL1YIR009W VID30P53076 958 aa2.25□□□□□ -2.05
MSL1YIR009W YGR066CP53242 292 aa2.25□□□□□ -2.05
MSL1YIR009W OGG1P53397 376 aaPredicted RBP2.25□□□□□ -2.05
MSL1YIR009W RPC11Q04307 110 aaPredicted RBP2.25□□□□□ -2.05
MSL1YIR009W DPB4Q04603 196 aaKnown RBP2.25□□□□□ -2.05
MSL1YIR009W ERB1Q04660 807 aaKnown RBP2.25□□□□□ -2.05
MSL1YIR009W GRX6Q12438 231 aa2.25□□□□□ -2.05
MSL1YIR009W YJR112W-AQ3E743 109 aa2.25□□□□□ -2.05
MSL1YIR009W BNI1P41832 1953 aa2.25□□□□□ -2.05
MSL1YIR009W MF(ALPHA)1P01149 165 aa2.24□□□□□ -2.05
MSL1YIR009W DFR1P07807 211 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
MSL1YIR009W KRS1P15180 591 aaKnown RBP2.24□□□□□ -2.05
MSL1YIR009W KGD1P20967 1014 aaKnown RBP2.24□□□□□ -2.05
MSL1YIR009W PWP1P21304 576 aaKnown RBP2.24□□□□□ -2.05
MSL1YIR009W REC107P21651 314 aa2.24□□□□□ -2.05
MSL1YIR009W ADK2P26364 225 aa2.24□□□□□ -2.05
MSL1YIR009W PAP1P29468 568 aaKnown RBP2.24□□□□□ -2.05
MSL1YIR009W TFB1P32776 642 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms