RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C VBA3P25594 458 aa3.52□□□□□ -1.85
SSM4YIL030C VBA5P36172 582 aa3.52□□□□□ -1.85
SSM4YIL030C FAD1P38913 306 aa3.52□□□□□ -1.85
SSM4YIL030C GAT1P43574 510 aa3.52□□□□□ -1.85
SSM4YIL030C AVT1P47082 602 aa3.52□□□□□ -1.85
SSM4YIL030C YGR012WP53206 393 aa3.52□□□□□ -1.85
SSM4YIL030C TBF1Q02457 562 aa3.52□□□□□ -1.85
SSM4YIL030C YLR283WQ05867 314 aa3.52□□□□□ -1.85
SSM4YIL030C DUS3Q06053 668 aaKnown RBP3.52□□□□□ -1.85
SSM4YIL030C NTO1Q12311 748 aa3.52□□□□□ -1.85
SSM4YIL030C YOR012WQ12351 137 aa3.52□□□□□ -1.85
SSM4YIL030C CTF3Q12748 733 aa3.52□□□□□ -1.85
SSM4YIL030C TEC1P18412 486 aa3.52□□□□□ -1.85
SSM4YIL030C GLN1P32288 370 aaKnown RBP3.52□□□□□ -1.85
SSM4YIL030C NIC96P34077 839 aa3.52□□□□□ -1.85
SSM4YIL030C SOL2P37262 315 aa3.52□□□□□ -1.85
SSM4YIL030C ECM31P38122 312 aa3.52□□□□□ -1.85
SSM4YIL030C APN2P38207 520 aa3.52□□□□□ -1.85
SSM4YIL030C SRP72P38688 640 aaKnown RBP3.52□□□□□ -1.85
SSM4YIL030C FSH1P38777 243 aaKnown RBP3.52□□□□□ -1.85
SSM4YIL030C YEL068CP39977 110 aa3.52□□□□□ -1.85
SSM4YIL030C JLP2P40206 208 aa3.52□□□□□ -1.85
SSM4YIL030C MZM1Q03429 123 aaPredicted RBP3.52□□□□□ -1.85
SSM4YIL030C YLR345WQ06137 509 aa3.52□□□□□ -1.85
SSM4YIL030C YPR127WQ06494 345 aa3.52□□□□□ -1.85
SSM4YIL030C SOG2Q08817 791 aa3.52□□□□□ -1.85
SSM4YIL030C CTT1P06115 562 aa3.52□□□□□ -1.85
SSM4YIL030C PRE7P23724 241 aaKnown RBP3.52□□□□□ -1.85
SSM4YIL030C CIN8P27895 1000 aa3.52□□□□□ -1.85
SSM4YIL030C HBS1P32769 611 aaKnown RBP3.52□□□□□ -1.85
SSM4YIL030C RPC34P32910 317 aa3.52□□□□□ -1.85
SSM4YIL030C YPC1P38298 316 aa3.52□□□□□ -1.85
SSM4YIL030C PTC2P39966 464 aaKnown RBP3.52□□□□□ -1.85
SSM4YIL030C RSC9Q03124 581 aa3.52□□□□□ -1.85
SSM4YIL030C NHX1Q04121 633 aa3.52□□□□□ -1.85
SSM4YIL030C GPI11Q06636 219 aa3.52□□□□□ -1.85
SSM4YIL030C APC9Q12107 265 aa3.52□□□□□ -1.85
SSM4YIL030C BAG7Q12128 409 aa3.52□□□□□ -1.85
SSM4YIL030C YGK3Q12222 375 aaPredicted RBP3.52□□□□□ -1.85
SSM4YIL030C PSY3Q12318 242 aa3.52□□□□□ -1.85
SSM4YIL030C DCP1Q12517 231 aaPredicted RBP3.52□□□□□ -1.85
SSM4YIL030C TY4B-PA0A0B7P3V8 1104 aa3.51□□□□□ -1.85
SSM4YIL030C CCP1P00431 361 aa3.51□□□□□ -1.85
SSM4YIL030C GAL10P04397 699 aa3.51□□□□□ -1.85
SSM4YIL030C CYT1P07143 309 aa3.51□□□□□ -1.85
SSM4YIL030C SEC15P22224 910 aa3.51□□□□□ -1.85
SSM4YIL030C SLX5P32828 619 aaKnown RBP3.51□□□□□ -1.85
SSM4YIL030C CCZ1P38273 704 aa3.51□□□□□ -1.85
SSM4YIL030C NMD3P38861 518 aaKnown RBP3.51□□□□□ -1.85
SSM4YIL030C SLX8P40072 274 aa3.51□□□□□ -1.85
SSM4YIL030C DLD2P46681 530 aaKnown RBP3.51□□□□□ -1.85
SSM4YIL030C MPS3P47069 682 aa3.51□□□□□ -1.85
SSM4YIL030C GCV2P49095 1034 aa3.51□□□□□ -1.85
SSM4YIL030C TPO1Q07824 586 aa3.51□□□□□ -1.85
SSM4YIL030C BAR1P12630 587 aa3.51□□□□□ -1.85
SSM4YIL030C PDR3P33200 976 aa3.51□□□□□ -1.85
SSM4YIL030C CRP1P38845 465 aaKnown RBP3.51□□□□□ -1.85
SSM4YIL030C YER158CP40095 573 aa3.51□□□□□ -1.85
SSM4YIL030C GDS1P41913 522 aa3.51□□□□□ -1.85
SSM4YIL030C RGD2P43556 714 aa3.51□□□□□ -1.85
SSM4YIL030C NET1P47035 1189 aa3.51□□□□□ -1.85
SSM4YIL030C COG1P53079 417 aa3.51□□□□□ -1.85
SSM4YIL030C ELP3Q02908 557 aaKnown RBP3.51□□□□□ -1.85
SSM4YIL030C GIP3Q03016 1276 aa3.51□□□□□ -1.85
SSM4YIL030C DCS1Q06151 350 aa3.51□□□□□ -1.85
SSM4YIL030C HXK2P04807 486 aaKnown RBP3.51□□□□□ -1.85
SSM4YIL030C CAN1P04817 590 aa3.51□□□□□ -1.85
SSM4YIL030C SEN2P16658 377 aa3.51□□□□□ -1.85
SSM4YIL030C DIT1P21623 536 aa3.51□□□□□ -1.85
SSM4YIL030C SGV1P23293 657 aaKnown RBP3.51□□□□□ -1.85
SSM4YIL030C MSS51P32335 436 aa3.51□□□□□ -1.85
SSM4YIL030C PRP21P32524 280 aaPredicted RBP3.51□□□□□ -1.85
SSM4YIL030C TAF14P35189 244 aa3.51□□□□□ -1.85
SSM4YIL030C PTH1P38876 190 aaKnown RBP3.51□□□□□ -1.85
SSM4YIL030C MTR3P48240 250 aaPredicted RBP3.51□□□□□ -1.85
SSM4YIL030C ARP4P80428 489 aa3.51□□□□□ -1.85
SSM4YIL030C MEH1Q02205 184 aa3.51□□□□□ -1.85
SSM4YIL030C YPL068CQ02749 293 aa3.51□□□□□ -1.85
SSM4YIL030C PFK27Q12471 397 aaPredicted RBP3.51□□□□□ -1.85
SSM4YIL030C PMA1P05030 918 aaKnown RBP3.5□□□□□ -1.85
SSM4YIL030C LAT1P12695 482 aaKnown RBP3.5□□□□□ -1.85
SSM4YIL030C HXT2P23585 541 aa3.5□□□□□ -1.85
SSM4YIL030C PHO3P24031 467 aa3.5□□□□□ -1.85
SSM4YIL030C TRR1P29509 319 aaKnown RBP3.5□□□□□ -1.85
SSM4YIL030C GEM1P39722 662 aa3.5□□□□□ -1.85
SSM4YIL030C NDE1P40215 560 aa3.5□□□□□ -1.85
SSM4YIL030C YAE1P47118 141 aaPredicted RBP3.5□□□□□ -1.85
SSM4YIL030C SAS4Q04003 481 aa3.5□□□□□ -1.85
SSM4YIL030C SEC13Q04491 297 aaKnown RBP3.5□□□□□ -1.85
SSM4YIL030C ATG20Q07528 640 aa3.5□□□□□ -1.85
SSM4YIL030C CRT10Q08226 957 aa3.5□□□□□ -1.85
SSM4YIL030C YOL131WQ08270 108 aa3.5□□□□□ -1.85
SSM4YIL030C BBP1Q12365 385 aa3.5□□□□□ -1.85
SSM4YIL030C EMP46Q12396 444 aa3.5□□□□□ -1.85
SSM4YIL030C HTA1P04911 132 aaKnown RBP3.5□□□□□ -1.85
SSM4YIL030C PEX1P24004 1043 aa3.5□□□□□ -1.85
SSM4YIL030C MRPL32P25348 183 aa3.5□□□□□ -1.85
SSM4YIL030C HYM1P32464 399 aa3.5□□□□□ -1.85
SSM4YIL030C PIN4P34217 668 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
SSM4YIL030C YBR053CP38235 358 aa3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms