RNA–Protein interactions for RNA: YGR247W

CPD1, Transcript of Cyclic nucleotide phosphodiesterase, yeastyeast

Gene CPD1, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPD1YGR247W CDC123Q05791 360 aa8.7□□□□□ -1.02
CPD1YGR247W REH1Q06709 432 aa8.7□□□□□ -1.02
CPD1YGR247W MRH1Q12117 320 aaPredicted RBP8.7□□□□□ -1.02
CPD1YGR247W UPC2Q12151 913 aa8.7□□□□□ -1.02
CPD1YGR247W PST1Q12355 444 aa8.7□□□□□ -1.02
CPD1YGR247W RSR1P13856 272 aa8.69□□□□□ -1.02
CPD1YGR247W ADH7P25377 361 aa8.69□□□□□ -1.02
CPD1YGR247W MKK2P32491 506 aa8.69□□□□□ -1.02
CPD1YGR247W KAP122P32767 1081 aa8.69□□□□□ -1.02
CPD1YGR247W EBP2P36049 427 aaKnown RBP8.69□□□□□ -1.02
CPD1YGR247W INM1P38710 295 aa8.69□□□□□ -1.02
CPD1YGR247W CAJ1P39101 391 aa8.69□□□□□ -1.02
CPD1YGR247W SER3P40054 469 aa8.69□□□□□ -1.02
CPD1YGR247W NDE1P40215 560 aa8.69□□□□□ -1.02
CPD1YGR247W YJR149WP47177 404 aa8.69□□□□□ -1.02
CPD1YGR247W YGR015CP53208 328 aa8.69□□□□□ -1.02
CPD1YGR247W BOP3P53958 396 aa8.69□□□□□ -1.02
CPD1YGR247W UTP6Q02354 440 aaKnown RBP8.69□□□□□ -1.02
CPD1YGR247W SRP1Q02821 542 aaKnown RBP8.69□□□□□ -1.02
CPD1YGR247W CDC21P06785 304 aa8.68□□□□□ -1.02
CPD1YGR247W YCK2P23292 546 aaKnown RBP8.68□□□□□ -1.02
CPD1YGR247W TPS2P31688 896 aaKnown RBP8.68□□□□□ -1.02
CPD1YGR247W ORC2P32833 620 aa8.68□□□□□ -1.02
CPD1YGR247W UGP1P32861 499 aaKnown RBP8.68□□□□□ -1.02
CPD1YGR247W EFM1P38732 585 aa8.68□□□□□ -1.02
CPD1YGR247W VNX1P42839 908 aa8.68□□□□□ -1.02
CPD1YGR247W RPL22BP56628 122 aaKnown RBP8.68□□□□□ -1.02
CPD1YGR247W RSC2Q06488 889 aa8.68□□□□□ -1.02
CPD1YGR247W HDA3Q06623 655 aa8.68□□□□□ -1.02
CPD1YGR247W ATG23Q06671 453 aa8.68□□□□□ -1.02
CPD1YGR247W RAX1Q08760 435 aa8.68□□□□□ -1.02
CPD1YGR247W BRR1Q99177 341 aaPredicted RBP8.68□□□□□ -1.02
CPD1YGR247W CYR1P08678 2026 aaKnown RBP8.68□□□□□ -1.02
CPD1YGR247W GCR1P07261 785 aa8.67□□□□□ -1.02
CPD1YGR247W BAS1P22035 811 aa8.67□□□□□ -1.02
CPD1YGR247W MRPL32P25348 183 aa8.67□□□□□ -1.02
CPD1YGR247W AGP1P25376 633 aa8.67□□□□□ -1.02
CPD1YGR247W AXL2P38928 823 aa8.67□□□□□ -1.02
CPD1YGR247W MBP1P39678 833 aa8.67□□□□□ -1.02
CPD1YGR247W ATG36P46983 293 aa8.67□□□□□ -1.02
CPD1YGR247W JHD2P47156 728 aaPredicted RBP8.67□□□□□ -1.02
CPD1YGR247W APT1P49435 187 aaKnown RBP8.67□□□□□ -1.02
CPD1YGR247W ROY1Q04847 553 aa8.67□□□□□ -1.02
CPD1YGR247W TEF1P02994 458 aaKnown RBP8.66□□□□□ -1.02
CPD1YGR247W PEP5P12868 1029 aa8.66□□□□□ -1.02
CPD1YGR247W ADE1P27616 306 aa8.66□□□□□ -1.02
CPD1YGR247W NAM9P27929 486 aa8.66□□□□□ -1.02
CPD1YGR247W PAP1P29468 568 aaKnown RBP8.66□□□□□ -1.02
CPD1YGR247W BEM3P32873 1128 aa8.66□□□□□ -1.02
CPD1YGR247W YHR112CP38716 378 aa8.66□□□□□ -1.02
CPD1YGR247W MNT3P40549 630 aa8.66□□□□□ -1.02
CPD1YGR247W SAE2P46946 345 aa8.66□□□□□ -1.02
CPD1YGR247W HOC1P47124 396 aa8.66□□□□□ -1.02
CPD1YGR247W ROM1P53046 1155 aa8.66□□□□□ -1.02
CPD1YGR247W BOL2P53082 120 aa8.66□□□□□ -1.02
CPD1YGR247W MDM34P53083 459 aa8.66□□□□□ -1.02
CPD1YGR247W YNL092WP53934 400 aa8.66□□□□□ -1.02
CPD1YGR247W BCH1Q05029 724 aa8.66□□□□□ -1.02
CPD1YGR247W UTP13Q05946 817 aaKnown RBP8.66□□□□□ -1.02
CPD1YGR247W ACM1Q08981 209 aa8.66□□□□□ -1.02
CPD1YGR247W AKR2Q12013 749 aa8.66□□□□□ -1.02
CPD1YGR247W HUA2Q12134 243 aa8.66□□□□□ -1.02
CPD1YGR247W YPR022CQ12139 1133 aa8.66□□□□□ -1.02
CPD1YGR247W UTP20P35194 2493 aaKnown RBP8.65□□□□□ -1.02
CPD1YGR247W RAD1P06777 1100 aa8.65□□□□□ -1.02
CPD1YGR247W SEC53P07283 254 aaKnown RBP8.65□□□□□ -1.02
CPD1YGR247W BUD14P27637 709 aa8.65□□□□□ -1.02
CPD1YGR247W YKL100CP34248 587 aa8.65□□□□□ -1.02
CPD1YGR247W GGC1P38988 300 aa8.65□□□□□ -1.02
CPD1YGR247W TFG1P41895 735 aaPredicted RBP8.65□□□□□ -1.02
CPD1YGR247W CCT8P47079 568 aaKnown RBP8.65□□□□□ -1.02
CPD1YGR247W YNR021WP53723 404 aaKnown RBP8.65□□□□□ -1.02
CPD1YGR247W URH1Q04179 340 aa8.65□□□□□ -1.02
CPD1YGR247W OMS1Q06668 471 aa8.65□□□□□ -1.02
CPD1YGR247W TY4A-HQ6Q5P6 413 aa8.65□□□□□ -1.02
CPD1YGR247W CMD1P06787 147 aaKnown RBP8.64□□□□□ -1.03
CPD1YGR247W GPA2P10823 449 aa8.64□□□□□ -1.03
CPD1YGR247W KAR1P11927 433 aa8.64□□□□□ -1.03
CPD1YGR247W SPO16P17122 198 aa8.64□□□□□ -1.03
CPD1YGR247W PRP6P19735 899 aaPredicted RBP8.64□□□□□ -1.03
CPD1YGR247W AMS1P22855 1083 aa8.64□□□□□ -1.03
CPD1YGR247W MCM5P29496 775 aaKnown RBP8.64□□□□□ -1.03
CPD1YGR247W MOH1P38191 138 aa8.64□□□□□ -1.03
CPD1YGR247W RRN10P38204 145 aa8.64□□□□□ -1.03
CPD1YGR247W MET30P39014 640 aa8.64□□□□□ -1.03
CPD1YGR247W NPT1P39683 429 aaKnown RBP8.64□□□□□ -1.03
CPD1YGR247W NMD5P46970 1048 aa8.64□□□□□ -1.03
CPD1YGR247W VPS73P53142 486 aaKnown RBP8.64□□□□□ -1.03
CPD1YGR247W KXD1P53158 218 aa8.64□□□□□ -1.03
CPD1YGR247W CLD1P53264 445 aa8.64□□□□□ -1.03
CPD1YGR247W ATF2P53296 535 aa8.64□□□□□ -1.03
CPD1YGR247W COG6P53959 839 aa8.64□□□□□ -1.03
CPD1YGR247W SML1Q04964 104 aa8.64□□□□□ -1.03
CPD1YGR247W CBF1P17106 351 aa8.63□□□□□ -1.03
CPD1YGR247W YCR102CP25608 368 aa8.63□□□□□ -1.03
CPD1YGR247W YJU2P28320 278 aaPredicted RBP8.63□□□□□ -1.03
CPD1YGR247W FAA1P30624 700 aaKnown RBP8.63□□□□□ -1.03
CPD1YGR247W GCD11P32481 527 aaKnown RBP8.63□□□□□ -1.03
CPD1YGR247W GID8P40208 455 aa8.63□□□□□ -1.03
CPD1YGR247W MAD1P40957 749 aa8.63□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 36.9 ms