RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W PET111P08468 800 aa3.66□□□□□ -1.82
PTI1YGR156W YIH1P25637 258 aa3.66□□□□□ -1.82
PTI1YGR156W PEP3P27801 918 aa3.66□□□□□ -1.82
PTI1YGR156W MRE11P32829 692 aa3.66□□□□□ -1.82
PTI1YGR156W BLI1P35727 113 aa3.66□□□□□ -1.82
PTI1YGR156W SNU114P36048 1008 aaKnown RBP3.66□□□□□ -1.82
PTI1YGR156W PKP1P40530 394 aa3.66□□□□□ -1.82
PTI1YGR156W CDC1P40986 491 aa3.66□□□□□ -1.82
PTI1YGR156W YML037CQ03703 340 aa3.66□□□□□ -1.82
PTI1YGR156W YLR345WQ06137 509 aa3.66□□□□□ -1.82
PTI1YGR156W LYS21Q12122 440 aaKnown RBP3.66□□□□□ -1.82
PTI1YGR156W VMR1P38735 1592 aa3.66□□□□□ -1.82
PTI1YGR156W SRB8P25648 1427 aa3.65□□□□□ -1.83
PTI1YGR156W SNT1P25357 1226 aa3.65□□□□□ -1.83
PTI1YGR156W PRD1P25375 712 aa3.65□□□□□ -1.83
PTI1YGR156W ADH7P25377 361 aa3.65□□□□□ -1.83
PTI1YGR156W ADK2P26364 225 aa3.65□□□□□ -1.83
PTI1YGR156W SOF1P33750 489 aaKnown RBP3.65□□□□□ -1.83
PTI1YGR156W TIF3P34167 436 aaKnown RBP3.65□□□□□ -1.83
PTI1YGR156W PEX5P35056 612 aa3.65□□□□□ -1.83
PTI1YGR156W UBP11P36026 717 aa3.65□□□□□ -1.83
PTI1YGR156W ADE17P38009 592 aaKnown RBP3.65□□□□□ -1.83
PTI1YGR156W MNN2P38069 597 aa3.65□□□□□ -1.83
PTI1YGR156W VID24P38263 362 aa3.65□□□□□ -1.83
PTI1YGR156W IMD2P38697 523 aaKnown RBP3.65□□□□□ -1.83
PTI1YGR156W MRX1P40050 688 aa3.65□□□□□ -1.83
PTI1YGR156W ASG1P40467 964 aa3.65□□□□□ -1.83
PTI1YGR156W DPB11P47027 764 aaPredicted RBP3.65□□□□□ -1.83
PTI1YGR156W IMD3P50095 523 aaKnown RBP3.65□□□□□ -1.83
PTI1YGR156W LCL3P53153 274 aa3.65□□□□□ -1.83
PTI1YGR156W NNF2P53253 936 aa3.65□□□□□ -1.83
PTI1YGR156W AAT1Q01802 451 aa3.65□□□□□ -1.83
PTI1YGR156W SXM1Q04175 944 aaKnown RBP3.65□□□□□ -1.83
PTI1YGR156W MRD1Q06106 887 aaKnown RBP3.65□□□□□ -1.83
PTI1YGR156W YLR352WQ06479 807 aa3.65□□□□□ -1.83
PTI1YGR156W LUC7Q07508 261 aaPredicted RBP3.65□□□□□ -1.83
PTI1YGR156W RTC1Q08281 1341 aa3.65□□□□□ -1.83
PTI1YGR156W CHO1P08456 276 aa3.64□□□□□ -1.83
PTI1YGR156W PUP3P25451 205 aaKnown RBP3.64□□□□□ -1.83
PTI1YGR156W SYN8P31377 255 aa3.64□□□□□ -1.83
PTI1YGR156W SSE2P32590 693 aaKnown RBP3.64□□□□□ -1.83
PTI1YGR156W SEC66P33754 206 aa3.64□□□□□ -1.83
PTI1YGR156W WBP1P33767 430 aaKnown RBP3.64□□□□□ -1.83
PTI1YGR156W LHS1P36016 881 aa3.64□□□□□ -1.83
PTI1YGR156W REG2P38232 338 aa3.64□□□□□ -1.83
PTI1YGR156W MUM2P38236 366 aa3.64□□□□□ -1.83
PTI1YGR156W TOM71P38825 639 aaKnown RBP3.64□□□□□ -1.83
PTI1YGR156W CIN1P40987 1014 aa3.64□□□□□ -1.83
PTI1YGR156W YPR003CP53394 754 aa3.64□□□□□ -1.83
PTI1YGR156W VTC3Q02725 835 aa3.64□□□□□ -1.83
PTI1YGR156W FIN1Q03898 291 aa3.64□□□□□ -1.83
PTI1YGR156W RQC1Q05468 723 aaKnown RBP3.64□□□□□ -1.83
PTI1YGR156W VPS38Q05919 439 aa3.64□□□□□ -1.83
PTI1YGR156W ETT1Q08421 412 aaKnown RBP3.64□□□□□ -1.83
PTI1YGR156W INP53Q12271 1107 aa3.64□□□□□ -1.83
PTI1YGR156W AVL9Q12500 764 aa3.64□□□□□ -1.83
PTI1YGR156W ISN1Q99312 450 aa3.64□□□□□ -1.83
PTI1YGR156W IML1P47170 1584 aa3.63□□□□□ -1.83
PTI1YGR156W YBT1P32386 1661 aa3.63□□□□□ -1.83
PTI1YGR156W NUP188P52593 1655 aaKnown RBP3.63□□□□□ -1.83
PTI1YGR156W MF(ALPHA)1P01149 165 aa3.63□□□□□ -1.83
PTI1YGR156W HXK2P04807 486 aaKnown RBP3.63□□□□□ -1.83
PTI1YGR156W PMS1P14242 873 aa3.63□□□□□ -1.83
PTI1YGR156W KGD1P20967 1014 aaKnown RBP3.63□□□□□ -1.83
PTI1YGR156W VMA16P23968 213 aa3.63□□□□□ -1.83
PTI1YGR156W GPI10P30777 616 aa3.63□□□□□ -1.83
PTI1YGR156W TCD2P36101 447 aaKnown RBP3.63□□□□□ -1.83
PTI1YGR156W ARP1P38696 384 aa3.63□□□□□ -1.83
PTI1YGR156W RTT107P38850 1070 aa3.63□□□□□ -1.83
PTI1YGR156W ELO1P39540 310 aa3.63□□□□□ -1.83
PTI1YGR156W ERV46P39727 415 aa3.63□□□□□ -1.83
PTI1YGR156W BUR6P40096 142 aa3.63□□□□□ -1.83
PTI1YGR156W VMA13P41807 478 aaKnown RBP3.63□□□□□ -1.83
PTI1YGR156W SMC3P47037 1230 aa3.63□□□□□ -1.83
PTI1YGR156W RPS7BP48164 190 aaKnown RBP3.63□□□□□ -1.83
PTI1YGR156W YGL260WP53056 76 aa3.63□□□□□ -1.83
PTI1YGR156W EAF7P53911 425 aaKnown RBP3.63□□□□□ -1.83
PTI1YGR156W BUD22Q04347 519 aaKnown RBP3.63□□□□□ -1.83
PTI1YGR156W YOL159CQ08300 171 aa3.63□□□□□ -1.83
PTI1YGR156W DSE3Q08729 430 aa3.63□□□□□ -1.83
PTI1YGR156W FMP40Q08968 688 aaPredicted RBP3.63□□□□□ -1.83
PTI1YGR156W RIM20Q12033 661 aa3.63□□□□□ -1.83
PTI1YGR156W SMC6Q12749 1114 aa3.63□□□□□ -1.83
PTI1YGR156W BCK1Q01389 1478 aa3.62□□□□□ -1.83
PTI1YGR156W BUD14P27637 709 aa3.62□□□□□ -1.83
PTI1YGR156W YBR144CP34215 104 aa3.62□□□□□ -1.83
PTI1YGR156W SRP72P38688 640 aaKnown RBP3.62□□□□□ -1.83
PTI1YGR156W GND1P38720 489 aaKnown RBP3.62□□□□□ -1.83
PTI1YGR156W YJL068CP40363 299 aa3.62□□□□□ -1.83
PTI1YGR156W YFR020WP43600 232 aa3.62□□□□□ -1.83
PTI1YGR156W FAR3P46671 204 aa3.62□□□□□ -1.83
PTI1YGR156W PET130P47065 347 aa3.62□□□□□ -1.83
PTI1YGR156W DIA3P52290 468 aa3.62□□□□□ -1.83
PTI1YGR156W VID30P53076 958 aa3.62□□□□□ -1.83
PTI1YGR156W TWF1P53250 332 aa3.62□□□□□ -1.83
PTI1YGR156W MSC1Q03104 513 aa3.62□□□□□ -1.83
PTI1YGR156W YLR455WQ06188 304 aa3.62□□□□□ -1.83
PTI1YGR156W NRT1Q08485 598 aa3.62□□□□□ -1.83
PTI1YGR156W ATG29Q12092 213 aa3.62□□□□□ -1.83
PTI1YGR156W SEC39Q12745 709 aa3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms