RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeastyeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF2YGR140W TIF3P34167 436 aaKnown RBP2.3□□□□□ -2.04
CBF2YGR140W YUH1P35127 236 aa2.3□□□□□ -2.04
CBF2YGR140W CBP4P37267 147 aa2.3□□□□□ -2.04
CBF2YGR140W TOM71P38825 639 aaKnown RBP2.3□□□□□ -2.04
CBF2YGR140W HRB1P38922 454 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
CBF2YGR140W GIP4P39732 760 aa2.3□□□□□ -2.04
CBF2YGR140W ECM10P39987 644 aa2.3□□□□□ -2.04
CBF2YGR140W FMP52P40008 231 aa2.3□□□□□ -2.04
CBF2YGR140W ORC3P54790 616 aa2.3□□□□□ -2.04
CBF2YGR140W APM1Q00776 475 aaPredicted RBP2.3□□□□□ -2.04
CBF2YGR140W EMI2Q04409 500 aaKnown RBP2.3□□□□□ -2.04
CBF2YGR140W RBS1Q05672 457 aaKnown RBP2.3□□□□□ -2.04
CBF2YGR140W ECM30Q06673 1274 aa2.3□□□□□ -2.04
CBF2YGR140W TEN1Q07921 160 aa2.3□□□□□ -2.04
CBF2YGR140W APC5Q08683 685 aa2.3□□□□□ -2.04
CBF2YGR140W RUD3Q12234 484 aaKnown RBP2.3□□□□□ -2.04
CBF2YGR140W RRP36Q12481 300 aaPredicted RBP2.3□□□□□ -2.04
CBF2YGR140W MTR10Q99189 972 aa2.3□□□□□ -2.04
CBF2YGR140W ISN1Q99312 450 aa2.3□□□□□ -2.04
CBF2YGR140W AAC1P04710 309 aa2.3□□□□□ -2.04
CBF2YGR140W ILV5P06168 395 aaKnown RBP2.3□□□□□ -2.04
CBF2YGR140W GAC1P28006 793 aa2.3□□□□□ -2.04
CBF2YGR140W LIP5P32875 414 aa2.3□□□□□ -2.04
CBF2YGR140W YBL028CP38202 106 aa2.3□□□□□ -2.04
CBF2YGR140W KSP1P38691 1029 aaKnown RBP2.3□□□□□ -2.04
CBF2YGR140W VPS41P38959 992 aa2.3□□□□□ -2.04
CBF2YGR140W ARG2P40360 574 aa2.3□□□□□ -2.04
CBF2YGR140W VPS73P53142 486 aaKnown RBP2.3□□□□□ -2.04
CBF2YGR140W MRPL22P53881 309 aa2.3□□□□□ -2.04
CBF2YGR140W ALF1P53904 254 aa2.3□□□□□ -2.04
CBF2YGR140W VTC3Q02725 835 aa2.3□□□□□ -2.04
CBF2YGR140W RBA50Q04418 439 aa2.3□□□□□ -2.04
CBF2YGR140W RNH1Q04740 348 aa2.3□□□□□ -2.04
CBF2YGR140W TMA10Q06177 86 aa2.3□□□□□ -2.04
CBF2YGR140W MCP2Q06567 569 aa2.3□□□□□ -2.04
CBF2YGR140W MRH1Q12117 320 aaPredicted RBP2.3□□□□□ -2.04
CBF2YGR140W YDL177CQ12257 170 aa2.3□□□□□ -2.04
CBF2YGR140W RHO2P06781 192 aa2.29□□□□□ -2.04
CBF2YGR140W ERG11P10614 530 aa2.29□□□□□ -2.04
CBF2YGR140W KGD2P19262 463 aaPredicted RBP2.29□□□□□ -2.04
CBF2YGR140W PUP3P25451 205 aaKnown RBP2.29□□□□□ -2.04
CBF2YGR140W NDI1P32340 513 aa2.29□□□□□ -2.04
CBF2YGR140W GEX2P36173 615 aa2.29□□□□□ -2.04
CBF2YGR140W ADE17P38009 592 aaKnown RBP2.29□□□□□ -2.04
CBF2YGR140W RPL32P38061 130 aaKnown RBP2.29□□□□□ -2.04
CBF2YGR140W KAP104P38217 918 aaKnown RBP2.29□□□□□ -2.04
CBF2YGR140W YBR053CP38235 358 aa2.29□□□□□ -2.04
CBF2YGR140W CBR1P38626 284 aaKnown RBP2.29□□□□□ -2.04
CBF2YGR140W BFR1P38934 470 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
CBF2YGR140W SAP1P39955 897 aaKnown RBP2.29□□□□□ -2.04
CBF2YGR140W PMT6P42934 759 aa2.29□□□□□ -2.04
CBF2YGR140W YFR020WP43600 232 aa2.29□□□□□ -2.04
CBF2YGR140W YJL163CP46996 555 aa2.29□□□□□ -2.04
CBF2YGR140W MSY1P48527 492 aa2.29□□□□□ -2.04
CBF2YGR140W NUP84P52891 726 aa2.29□□□□□ -2.04
CBF2YGR140W PIB2P53191 635 aa2.29□□□□□ -2.04
CBF2YGR140W LSC1P53598 329 aaKnown RBP2.29□□□□□ -2.04
CBF2YGR140W COP1P53622 1201 aaKnown RBP2.29□□□□□ -2.04
CBF2YGR140W DUG3P53871 357 aa2.29□□□□□ -2.04
CBF2YGR140W TOF2Q02208 771 aa2.29□□□□□ -2.04
CBF2YGR140W DUS4Q06063 367 aa2.29□□□□□ -2.04
CBF2YGR140W YDL242WQ07746 117 aa2.29□□□□□ -2.04
CBF2YGR140W UAF30Q08747 228 aa2.29□□□□□ -2.04
CBF2YGR140W YLR049CQ12110 428 aa2.29□□□□□ -2.04
CBF2YGR140W VAM3Q12241 283 aa2.29□□□□□ -2.04
CBF2YGR140W SRN2Q99176 213 aa2.29□□□□□ -2.04
CBF2YGR140W CHO2P05374 869 aaKnown RBP2.29□□□□□ -2.04
CBF2YGR140W TRP4P07285 380 aaPredicted RBP2.29□□□□□ -2.04
CBF2YGR140W PMR1P13586 950 aa2.29□□□□□ -2.04
CBF2YGR140W YIM1P28625 365 aa2.29□□□□□ -2.04
CBF2YGR140W NTG1P31378 399 aa2.29□□□□□ -2.04
CBF2YGR140W RIM1P32445 135 aaKnown RBP2.29□□□□□ -2.04
CBF2YGR140W MSS1P32559 526 aaPredicted RBP2.29□□□□□ -2.04
CBF2YGR140W GDA1P32621 518 aa2.29□□□□□ -2.04
CBF2YGR140W DEF1P35732 738 aaKnown RBP2.29□□□□□ -2.04
CBF2YGR140W PIM1P36775 1133 aa2.29□□□□□ -2.04
CBF2YGR140W OLA1P38219 394 aaKnown RBP2.29□□□□□ -2.04
CBF2YGR140W HSM3P38348 480 aa2.29□□□□□ -2.04
CBF2YGR140W VBA2P38358 474 aaKnown RBP2.29□□□□□ -2.04
CBF2YGR140W RIX1P38883 763 aaPredicted RBP2.29□□□□□ -2.04
CBF2YGR140W END3P39013 349 aa2.29□□□□□ -2.04
CBF2YGR140W ELO1P39540 310 aa2.29□□□□□ -2.04
CBF2YGR140W YER130CP39959 443 aa2.29□□□□□ -2.04
CBF2YGR140W NAS2P40555 220 aa2.29□□□□□ -2.04
CBF2YGR140W EMC2P47133 292 aaKnown RBP2.29□□□□□ -2.04
CBF2YGR140W YGR126WP53274 230 aa2.29□□□□□ -2.04
CBF2YGR140W YVH1Q02256 364 aaKnown RBP2.29□□□□□ -2.04
CBF2YGR140W PLM2Q04383 521 aa2.29□□□□□ -2.04
CBF2YGR140W YLR413WQ06689 675 aa2.29□□□□□ -2.04
CBF2YGR140W ETT1Q08421 412 aaKnown RBP2.29□□□□□ -2.04
CBF2YGR140W MCA1Q08601 432 aa2.29□□□□□ -2.04
CBF2YGR140W YOR389WQ08912 624 aa2.29□□□□□ -2.04
CBF2YGR140W MLH3Q12083 715 aa2.29□□□□□ -2.04
CBF2YGR140W AHA1Q12449 350 aaKnown RBP2.29□□□□□ -2.04
CBF2YGR140W CDC6P09119 513 aa2.28□□□□□ -2.04
CBF2YGR140W IMD2P38697 523 aaKnown RBP2.28□□□□□ -2.04
CBF2YGR140W AGX1P43567 385 aa2.28□□□□□ -2.04
CBF2YGR140W MCM6P53091 1017 aaKnown RBP2.28□□□□□ -2.04
CBF2YGR140W YNL143CP53908 130 aa2.28□□□□□ -2.04
CBF2YGR140W YDR541CQ03049 344 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms