RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W MSG5P38590 489 aa4.33□□□□□ -1.72
PRE9YGR135W HIS2P38635 335 aa4.33□□□□□ -1.72
PRE9YGR135W STN1P38960 494 aa4.33□□□□□ -1.72
PRE9YGR135W PSD1P39006 500 aa4.33□□□□□ -1.72
PRE9YGR135W YIL077CP40508 320 aa4.33□□□□□ -1.72
PRE9YGR135W YRB1P41920 201 aaKnown RBP4.33□□□□□ -1.72
PRE9YGR135W STB1P42845 420 aa4.33□□□□□ -1.72
PRE9YGR135W IDS2P46958 469 aa4.33□□□□□ -1.72
PRE9YGR135W FMP33P46998 180 aa4.33□□□□□ -1.72
PRE9YGR135W YDL183CP48569 320 aa4.33□□□□□ -1.72
PRE9YGR135W RBL2P48606 106 aaKnown RBP4.33□□□□□ -1.72
PRE9YGR135W FMS1P50264 508 aa4.33□□□□□ -1.72
PRE9YGR135W NBP1P52919 319 aaPredicted RBP4.33□□□□□ -1.72
PRE9YGR135W USE1P53146 245 aa4.33□□□□□ -1.72
PRE9YGR135W HOP2P53187 214 aa4.33□□□□□ -1.72
PRE9YGR135W ORM1P53224 222 aa4.33□□□□□ -1.72
PRE9YGR135W TEX1P53851 422 aaKnown RBP4.33□□□□□ -1.72
PRE9YGR135W JJJ1P53863 590 aa4.33□□□□□ -1.72
PRE9YGR135W OSH6Q02201 448 aa4.33□□□□□ -1.72
PRE9YGR135W CTK1Q03957 528 aaKnown RBP4.33□□□□□ -1.72
PRE9YGR135W HMO1Q03973 246 aaKnown RBP4.33□□□□□ -1.72
PRE9YGR135W PPM1Q04081 328 aa4.33□□□□□ -1.72
PRE9YGR135W DON1Q05610 365 aa4.33□□□□□ -1.72
PRE9YGR135W YLR297WQ05899 129 aa4.33□□□□□ -1.72
PRE9YGR135W STP3Q05937 343 aa4.33□□□□□ -1.72
PRE9YGR135W ATG17Q06410 417 aa4.33□□□□□ -1.72
PRE9YGR135W AIM6Q07716 390 aa4.33□□□□□ -1.72
PRE9YGR135W NSE1Q07913 336 aa4.33□□□□□ -1.72
PRE9YGR135W GET4Q12125 312 aa4.33□□□□□ -1.72
PRE9YGR135W TAF3Q12297 353 aa4.33□□□□□ -1.72
PRE9YGR135W PNS1Q12412 539 aa4.33□□□□□ -1.72
PRE9YGR135W HIS5P07172 385 aa4.32□□□□□ -1.72
PRE9YGR135W CBS1P14066 229 aa4.32□□□□□ -1.72
PRE9YGR135W RPC19P28000 142 aaKnown RBP4.32□□□□□ -1.72
PRE9YGR135W RIB7P33312 244 aa4.32□□□□□ -1.72
PRE9YGR135W REG2P38232 338 aa4.32□□□□□ -1.72
PRE9YGR135W COS111P38308 924 aa4.32□□□□□ -1.72
PRE9YGR135W RPP1P38786 293 aa4.32□□□□□ -1.72
PRE9YGR135W POP2P39008 433 aa4.32□□□□□ -1.72
PRE9YGR135W FLC2P39719 783 aa4.32□□□□□ -1.72
PRE9YGR135W FMP10P40098 244 aa4.32□□□□□ -1.72
PRE9YGR135W PDS1P40316 373 aaPredicted RBP4.32□□□□□ -1.72
PRE9YGR135W MET12P46151 657 aa4.32□□□□□ -1.72
PRE9YGR135W TAM41P53230 385 aa4.32□□□□□ -1.72
PRE9YGR135W ART5P53244 586 aaKnown RBP4.32□□□□□ -1.72
PRE9YGR135W OGG1P53397 376 aaPredicted RBP4.32□□□□□ -1.72
PRE9YGR135W CSL4P53859 292 aaPredicted RBP4.32□□□□□ -1.72
PRE9YGR135W BNI5P53890 448 aaKnown RBP4.32□□□□□ -1.72
PRE9YGR135W ESBP6P53918 673 aa4.32□□□□□ -1.72
PRE9YGR135W CIK1Q01649 594 aa4.32□□□□□ -1.72
PRE9YGR135W YKR005CQ02203 525 aa4.32□□□□□ -1.72
PRE9YGR135W FMN1Q03778 218 aa4.32□□□□□ -1.72
PRE9YGR135W AIM32Q04689 311 aa4.32□□□□□ -1.72
PRE9YGR135W HOF1Q05080 669 aa4.32□□□□□ -1.72
PRE9YGR135W YDL057WQ07379 328 aa4.32□□□□□ -1.72
PRE9YGR135W VAM6Q07468 1049 aa4.32□□□□□ -1.72
PRE9YGR135W TGL5Q12043 749 aa4.32□□□□□ -1.72
PRE9YGR135W CHS5Q12114 671 aaKnown RBP4.32□□□□□ -1.72
PRE9YGR135W MSH5Q12175 901 aa4.32□□□□□ -1.72
PRE9YGR135W RUP1Q12242 671 aa4.32□□□□□ -1.72
PRE9YGR135W HRP1Q99383 534 aaKnown RBP4.32□□□□□ -1.72
PRE9YGR135W SNF3P10870 884 aa4.31□□□□□ -1.72
PRE9YGR135W DPB2P24482 689 aaPredicted RBP4.31□□□□□ -1.72
PRE9YGR135W ADY2P25613 283 aa4.31□□□□□ -1.72
PRE9YGR135W BRF1P29056 596 aa4.31□□□□□ -1.72
PRE9YGR135W PMI40P29952 429 aaKnown RBP4.31□□□□□ -1.72
PRE9YGR135W TPS2P31688 896 aaKnown RBP4.31□□□□□ -1.72
PRE9YGR135W ATO2P32907 282 aa4.31□□□□□ -1.72
PRE9YGR135W MDL1P33310 695 aa4.31□□□□□ -1.72
PRE9YGR135W COY1P34237 679 aa4.31□□□□□ -1.72
PRE9YGR135W HES1P35843 434 aa4.31□□□□□ -1.72
PRE9YGR135W YKL023WP36103 277 aaKnown RBP4.31□□□□□ -1.72
PRE9YGR135W YKR015CP36111 568 aa4.31□□□□□ -1.72
PRE9YGR135W APE3P37302 537 aaKnown RBP4.31□□□□□ -1.72
PRE9YGR135W SRO77P38163 1010 aa4.31□□□□□ -1.72
PRE9YGR135W TDP1P38319 544 aa4.31□□□□□ -1.72
PRE9YGR135W SPC97P38863 823 aa4.31□□□□□ -1.72
PRE9YGR135W GAA1P39012 614 aa4.31□□□□□ -1.72
PRE9YGR135W YJL193WP39542 402 aa4.31□□□□□ -1.72
PRE9YGR135W GDI1P39958 451 aaKnown RBP4.31□□□□□ -1.72
PRE9YGR135W GET2P40056 285 aa4.31□□□□□ -1.72
PRE9YGR135W TMN3P40071 706 aa4.31□□□□□ -1.72
PRE9YGR135W LTP1P40347 161 aa4.31□□□□□ -1.72
PRE9YGR135W PFK26P40433 827 aaKnown RBP4.31□□□□□ -1.72
PRE9YGR135W YIL166CP40445 542 aa4.31□□□□□ -1.72
PRE9YGR135W YIL161WP40449 235 aaKnown RBP4.31□□□□□ -1.72
PRE9YGR135W SSU1P41930 458 aa4.31□□□□□ -1.72
PRE9YGR135W MIG2P53035 382 aa4.31□□□□□ -1.72
PRE9YGR135W DRN1P53255 507 aaKnown RBP4.31□□□□□ -1.72
PRE9YGR135W YNL247WP53852 767 aaKnown RBP4.31□□□□□ -1.72
PRE9YGR135W ACL4Q03771 387 aa4.31□□□□□ -1.72
PRE9YGR135W YDR131CQ03899 556 aa4.31□□□□□ -1.72
PRE9YGR135W YDR179W-AQ03983 463 aa4.31□□□□□ -1.72
PRE9YGR135W CSM3Q04659 317 aa4.31□□□□□ -1.72
PRE9YGR135W SKG3Q06315 1026 aa4.31□□□□□ -1.72
PRE9YGR135W PUS9Q12069 462 aa4.31□□□□□ -1.72
PRE9YGR135W NMD4Q12129 218 aa4.31□□□□□ -1.72
PRE9YGR135W BUG1Q12191 341 aa4.31□□□□□ -1.72
PRE9YGR135W NFI1Q12216 726 aa4.31□□□□□ -1.72
PRE9YGR135W NTO1Q12311 748 aa4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 50.7 ms