RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C YBR085C-AO43137 85 aa3.24□□□□□ -1.89
XRN1YGL173C MET17P06106 444 aa3.24□□□□□ -1.89
XRN1YGL173C ALY1P36117 915 aa3.24□□□□□ -1.89
XRN1YGL173C SET3P36124 751 aa3.24□□□□□ -1.89
XRN1YGL173C NUP133P36161 1157 aa3.24□□□□□ -1.89
XRN1YGL173C EHT1P38295 451 aa3.24□□□□□ -1.89
XRN1YGL173C NTC20P38302 140 aaPredicted RBP3.24□□□□□ -1.89
XRN1YGL173C SHC1P39000 512 aa3.24□□□□□ -1.89
XRN1YGL173C NPT1P39683 429 aaKnown RBP3.24□□□□□ -1.89
XRN1YGL173C YNL144CP53907 740 aa3.24□□□□□ -1.89
XRN1YGL173C ACL4Q03771 387 aa3.24□□□□□ -1.89
XRN1YGL173C TPP1Q03796 238 aa3.24□□□□□ -1.89
XRN1YGL173C RSM24Q03976 319 aa3.24□□□□□ -1.89
XRN1YGL173C UBX2Q04228 584 aa3.24□□□□□ -1.89
XRN1YGL173C ROY1Q04847 553 aa3.24□□□□□ -1.89
XRN1YGL173C VPS38Q05919 439 aa3.24□□□□□ -1.89
XRN1YGL173C DUS4Q06063 367 aa3.24□□□□□ -1.89
XRN1YGL173C SGT2Q12118 346 aaKnown RBP3.24□□□□□ -1.89
XRN1YGL173C CDC37P06101 506 aaKnown RBP3.24□□□□□ -1.89
XRN1YGL173C RNR2P09938 399 aaKnown RBP3.24□□□□□ -1.89
XRN1YGL173C OSM1P21375 501 aaKnown RBP3.24□□□□□ -1.89
XRN1YGL173C ICL1P28240 557 aaPredicted RBP3.24□□□□□ -1.89
XRN1YGL173C RRP1P35178 278 aaPredicted RBP3.24□□□□□ -1.89
XRN1YGL173C NTR2P36118 322 aaPredicted RBP3.24□□□□□ -1.89
XRN1YGL173C VRP1P37370 817 aa3.24□□□□□ -1.89
XRN1YGL173C CTP1P38152 299 aa3.24□□□□□ -1.89
XRN1YGL173C YHR112CP38716 378 aa3.24□□□□□ -1.89
XRN1YGL173C CEM1P39525 442 aa3.24□□□□□ -1.89
XRN1YGL173C YER130CP39959 443 aa3.24□□□□□ -1.89
XRN1YGL173C AIP1P46680 615 aaKnown RBP3.24□□□□□ -1.89
XRN1YGL173C LIA1P47120 325 aaKnown RBP3.24□□□□□ -1.89
XRN1YGL173C GTO1P48239 356 aa3.24□□□□□ -1.89
XRN1YGL173C PRP31P49704 494 aaPredicted RBP3.24□□□□□ -1.89
XRN1YGL173C COG1P53079 417 aa3.24□□□□□ -1.89
XRN1YGL173C ALF1P53904 254 aa3.24□□□□□ -1.89
XRN1YGL173C YNL050CP53952 270 aa3.24□□□□□ -1.89
XRN1YGL173C SHR3Q02774 210 aa3.24□□□□□ -1.89
XRN1YGL173C SLU7Q02775 382 aaKnown RBP3.24□□□□□ -1.89
XRN1YGL173C SEC3P33332 1336 aaKnown RBP3.23□□□□□ -1.89
XRN1YGL173C ATP2P00830 511 aaKnown RBP3.23□□□□□ -1.89
XRN1YGL173C DED1P06634 604 aaKnown RBP3.23□□□□□ -1.89
XRN1YGL173C SSA3P09435 649 aaKnown RBP3.23□□□□□ -1.89
XRN1YGL173C YCR015CP25616 317 aa3.23□□□□□ -1.89
XRN1YGL173C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
XRN1YGL173C STB6P36085 766 aa3.23□□□□□ -1.89
XRN1YGL173C EFM2P38347 419 aa3.23□□□□□ -1.89
XRN1YGL173C PZF1P39933 429 aa3.23□□□□□ -1.89
XRN1YGL173C IAH1P41734 238 aa3.23□□□□□ -1.89
XRN1YGL173C LSB3P43603 459 aaKnown RBP3.23□□□□□ -1.89
XRN1YGL173C MTR3P48240 250 aaPredicted RBP3.23□□□□□ -1.89
XRN1YGL173C YNR068CP53754 272 aa3.23□□□□□ -1.89
XRN1YGL173C EAF7P53911 425 aaKnown RBP3.23□□□□□ -1.89
XRN1YGL173C SMA1Q02651 245 aa3.23□□□□□ -1.89
XRN1YGL173C KRE28Q04431 385 aa3.23□□□□□ -1.89
XRN1YGL173C OPT2Q06593 877 aa3.23□□□□□ -1.89
XRN1YGL173C ARR1Q06596 294 aa3.23□□□□□ -1.89
XRN1YGL173C YFT2Q06676 274 aa3.23□□□□□ -1.89
XRN1YGL173C HBT1Q07653 1046 aaKnown RBP3.23□□□□□ -1.89
XRN1YGL173C YOL159C-AQ3E769 90 aa3.23□□□□□ -1.89
XRN1YGL173C DAP2P18962 818 aa3.23□□□□□ -1.89
XRN1YGL173C CRM1P30822 1084 aaKnown RBP3.23□□□□□ -1.89
XRN1YGL173C YKT6P36015 200 aaKnown RBP3.23□□□□□ -1.89
XRN1YGL173C GPT2P36148 743 aa3.23□□□□□ -1.89
XRN1YGL173C DED81P38707 554 aaKnown RBP3.23□□□□□ -1.89
XRN1YGL173C YHR054CP38780 354 aa3.23□□□□□ -1.89
XRN1YGL173C RIX1P38883 763 aaPredicted RBP3.23□□□□□ -1.89
XRN1YGL173C VPS73P53142 486 aaKnown RBP3.23□□□□□ -1.89
XRN1YGL173C PUS2P53167 370 aa3.23□□□□□ -1.89
XRN1YGL173C BUD9P53226 547 aa3.23□□□□□ -1.89
XRN1YGL173C FHN1P53279 174 aa3.23□□□□□ -1.89
XRN1YGL173C YMR178WQ03219 274 aaKnown RBP3.23□□□□□ -1.89
XRN1YGL173C URH1Q04179 340 aa3.23□□□□□ -1.89
XRN1YGL173C PHM7Q12252 991 aa3.23□□□□□ -1.89
XRN1YGL173C SAC3P46674 1301 aa3.23□□□□□ -1.89
XRN1YGL173C LEU4P06208 619 aaKnown RBP3.23□□□□□ -1.89
XRN1YGL173C SPO7P18410 259 aa3.23□□□□□ -1.89
XRN1YGL173C VPS3P23643 1011 aa3.23□□□□□ -1.89
XRN1YGL173C MNE1P24720 663 aa3.23□□□□□ -1.89
XRN1YGL173C CAD1P24813 409 aaKnown RBP3.23□□□□□ -1.89
XRN1YGL173C YSP3P25036 478 aa3.23□□□□□ -1.89
XRN1YGL173C SIN4P32259 974 aa3.23□□□□□ -1.89
XRN1YGL173C GLG1P36143 616 aa3.23□□□□□ -1.89
XRN1YGL173C CRG1P38892 291 aaRIP-Chip data3.23□□□□□ -1.89not detected
XRN1YGL173C ARB1P40024 610 aaKnown RBP3.23□□□□□ -1.89
XRN1YGL173C DPB11P47027 764 aaPredicted RBP3.23□□□□□ -1.89
XRN1YGL173C YGR054WP53235 642 aaKnown RBP3.23□□□□□ -1.89
XRN1YGL173C ARX1Q03862 593 aaKnown RBP3.23□□□□□ -1.89
XRN1YGL173C YLR456WQ06199 204 aa3.23□□□□□ -1.89
XRN1YGL173C TCO89Q08921 799 aa3.23□□□□□ -1.89
XRN1YGL173C AEP3Q12089 606 aa3.23□□□□□ -1.89
XRN1YGL173C HRP1Q99383 534 aaKnown RBP3.23□□□□□ -1.89
XRN1YGL173C SGV1P23293 657 aaKnown RBP3.22□□□□□ -1.89
XRN1YGL173C SPT10P35208 640 aa3.22□□□□□ -1.89
XRN1YGL173C RRT2P38332 387 aa3.22□□□□□ -1.89
XRN1YGL173C KEL1P38853 1164 aaKnown RBP3.22□□□□□ -1.89
XRN1YGL173C FMP52P40008 231 aa3.22□□□□□ -1.89
XRN1YGL173C YGR149WP48236 432 aa3.22□□□□□ -1.89
XRN1YGL173C YDL186WP48568 277 aa3.22□□□□□ -1.89
XRN1YGL173C ASN2P49090 572 aaKnown RBP3.22□□□□□ -1.89
XRN1YGL173C YAT1P80235 687 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms