RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W FUM1P08417 488 aaKnown RBP6.64□□□□□ -1.35
NUP49YGL172W RED1P14291 827 aa6.64□□□□□ -1.35
NUP49YGL172W YSR3P23501 404 aa6.64□□□□□ -1.35
NUP49YGL172W ISC10P32645 267 aa6.64□□□□□ -1.35
NUP49YGL172W PET112P33893 541 aa6.64□□□□□ -1.35
NUP49YGL172W SKT5P34226 696 aa6.64□□□□□ -1.35
NUP49YGL172W NUP120P35729 1037 aa6.64□□□□□ -1.35
NUP49YGL172W YPT52P36018 234 aaKnown RBP6.64□□□□□ -1.35
NUP49YGL172W YBR062CP38239 180 aa6.64□□□□□ -1.35
NUP49YGL172W DHH1P39517 506 aaKnown RBP6.64□□□□□ -1.35
NUP49YGL172W YEL073CP39974 107 aa6.64□□□□□ -1.35
NUP49YGL172W VMA13P41807 478 aaKnown RBP6.64□□□□□ -1.35
NUP49YGL172W TDA10P42938 290 aa6.64□□□□□ -1.35
NUP49YGL172W TY4A-JP47023 414 aa6.64□□□□□ -1.35
NUP49YGL172W MAD3P47074 515 aa6.64□□□□□ -1.35
NUP49YGL172W TAF6P53040 516 aa6.64□□□□□ -1.35
NUP49YGL172W ZRG17P53735 605 aa6.64□□□□□ -1.35
NUP49YGL172W SWS2P53937 143 aa6.64□□□□□ -1.35
NUP49YGL172W ECM9Q02202 377 aa6.64□□□□□ -1.35
NUP49YGL172W YDR444WQ04093 687 aa6.64□□□□□ -1.35
NUP49YGL172W VAM6Q07468 1049 aa6.64□□□□□ -1.35
NUP49YGL172W ENT4Q07872 247 aa6.64□□□□□ -1.35
NUP49YGL172W PLB3Q08108 686 aa6.64□□□□□ -1.35
NUP49YGL172W TMA46Q12000 345 aaKnown RBP6.64□□□□□ -1.35
NUP49YGL172W SRO7Q12038 1033 aa6.64□□□□□ -1.35
NUP49YGL172W RHO2P06781 192 aa6.63□□□□□ -1.35
NUP49YGL172W SWI5P08153 709 aa6.63□□□□□ -1.35
NUP49YGL172W NMT1P14743 455 aa6.63□□□□□ -1.35
NUP49YGL172W HSC82P15108 705 aaKnown RBP6.63□□□□□ -1.35
NUP49YGL172W ART10P18634 518 aaKnown RBP6.63□□□□□ -1.35
NUP49YGL172W SEC15P22224 910 aa6.63□□□□□ -1.35
NUP49YGL172W LOS1P33418 1100 aaPredicted RBP6.63□□□□□ -1.35
NUP49YGL172W YHR045WP38775 560 aa6.63□□□□□ -1.35
NUP49YGL172W UTP9P38882 575 aaKnown RBP6.63□□□□□ -1.35
NUP49YGL172W VPS41P38959 992 aa6.63□□□□□ -1.35
NUP49YGL172W PAC1P39946 494 aaKnown RBP6.63□□□□□ -1.35
NUP49YGL172W PTC2P39966 464 aaKnown RBP6.63□□□□□ -1.35
NUP49YGL172W GIM4P40005 111 aaKnown RBP6.63□□□□□ -1.35
NUP49YGL172W MEP1P40260 492 aa6.63□□□□□ -1.35
NUP49YGL172W ARC1P46672 376 aaKnown RBP6.63□□□□□ -1.35
NUP49YGL172W SAM37P50110 327 aa6.63□□□□□ -1.35
NUP49YGL172W EFM5P53200 248 aaKnown RBP6.63□□□□□ -1.35
NUP49YGL172W IBD2P53892 351 aa6.63□□□□□ -1.35
NUP49YGL172W LSM3P57743 89 aaKnown RBP6.63□□□□□ -1.35
NUP49YGL172W TRM82Q03774 444 aa6.63□□□□□ -1.35
NUP49YGL172W RIF2Q06208 395 aa6.63□□□□□ -1.35
NUP49YGL172W GRS2Q06817 618 aa6.63□□□□□ -1.35
NUP49YGL172W PST1Q12355 444 aa6.63□□□□□ -1.35
NUP49YGL172W GUK1P15454 187 aaKnown RBP6.62□□□□□ -1.35
NUP49YGL172W RPC19P28000 142 aaKnown RBP6.62□□□□□ -1.35
NUP49YGL172W YKL100CP34248 587 aa6.62□□□□□ -1.35
NUP49YGL172W DEF1P35732 738 aaKnown RBP6.62□□□□□ -1.35
NUP49YGL172W MUM2P38236 366 aa6.62□□□□□ -1.35
NUP49YGL172W DED81P38707 554 aaKnown RBP6.62□□□□□ -1.35
NUP49YGL172W SHU2P38957 223 aa6.62□□□□□ -1.35
NUP49YGL172W SEC31P38968 1273 aaKnown RBP6.62□□□□□ -1.35
NUP49YGL172W NPT1P39683 429 aaKnown RBP6.62□□□□□ -1.35
NUP49YGL172W SPF1P39986 1215 aaKnown RBP6.62□□□□□ -1.35
NUP49YGL172W COA1P40452 197 aa6.62□□□□□ -1.35
NUP49YGL172W YPS6P40583 537 aa6.62□□□□□ -1.35
NUP49YGL172W PFA3P42836 336 aa6.62□□□□□ -1.35
NUP49YGL172W AAT1Q01802 451 aa6.62□□□□□ -1.35
NUP49YGL172W TVP15Q03860 143 aa6.62□□□□□ -1.35
NUP49YGL172W BDS1Q08347 646 aa6.62□□□□□ -1.35
NUP49YGL172W YDR056CQ12025 205 aa6.62□□□□□ -1.35
NUP49YGL172W MCD1Q12158 566 aa6.62□□□□□ -1.35
NUP49YGL172W RSR1P13856 272 aa6.61□□□□□ -1.35
NUP49YGL172W CLB1P24868 471 aa6.61□□□□□ -1.35
NUP49YGL172W ERG6P25087 383 aaKnown RBP6.61□□□□□ -1.35
NUP49YGL172W SDH3P33421 198 aa6.61□□□□□ -1.35
NUP49YGL172W UBA4P38820 440 aa6.61□□□□□ -1.35
NUP49YGL172W YHB1P39676 399 aaKnown RBP6.61□□□□□ -1.35
NUP49YGL172W ZIM17P42844 174 aa6.61□□□□□ -1.35
NUP49YGL172W CIS3P47001 227 aa6.61□□□□□ -1.35
NUP49YGL172W SHY1P53266 389 aa6.61□□□□□ -1.35
NUP49YGL172W SUN4P53616 420 aa6.61□□□□□ -1.35
NUP49YGL172W SHE9Q04172 456 aa6.61□□□□□ -1.35
NUP49YGL172W BCH1Q05029 724 aa6.61□□□□□ -1.35
NUP49YGL172W MET8P15807 274 aa6.6□□□□□ -1.35
NUP49YGL172W SCL1P21243 252 aaKnown RBP6.6□□□□□ -1.35
NUP49YGL172W RPB10P22139 70 aa6.6□□□□□ -1.35
NUP49YGL172W YCK2P23292 546 aaKnown RBP6.6□□□□□ -1.35
NUP49YGL172W HSM3P38348 480 aa6.6□□□□□ -1.35
NUP49YGL172W RIM11P38615 370 aa6.6□□□□□ -1.35
NUP49YGL172W INM1P38710 295 aa6.6□□□□□ -1.35
NUP49YGL172W YHR127WP38833 243 aaKnown RBP6.6□□□□□ -1.35
NUP49YGL172W LTP1P40347 161 aa6.6□□□□□ -1.35
NUP49YGL172W UBP6P43593 499 aaKnown RBP6.6□□□□□ -1.35
NUP49YGL172W NUP85P46673 744 aa6.6□□□□□ -1.35
NUP49YGL172W STB2P46679 850 aa6.6□□□□□ -1.35
NUP49YGL172W MRS2Q01926 470 aa6.6□□□□□ -1.35
NUP49YGL172W ROT1Q03691 256 aa6.6□□□□□ -1.35
NUP49YGL172W THI73Q07904 523 aa6.6□□□□□ -1.35
NUP49YGL172W PFA4Q12006 378 aa6.6□□□□□ -1.35
NUP49YGL172W RTK1Q12100 620 aaPredicted RBP6.6□□□□□ -1.35
NUP49YGL172W GPR1Q12361 961 aa6.6□□□□□ -1.35
NUP49YGL172W PRP16P15938 1071 aaPredicted RBP6.59□□□□□ -1.35
NUP49YGL172W PPH21P23594 369 aa6.59□□□□□ -1.35
NUP49YGL172W CDC10P25342 322 aaKnown RBP6.59□□□□□ -1.35
NUP49YGL172W CRM1P30822 1084 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 61.1 ms