RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DEG1	YFL001W	RPL3	P14126	387 aa	Known RBP	4.86	□□□□□ -1.63
DEG1	YFL001W	ELO2	P25358	347 aa		4.86	□□□□□ -1.63
DEG1	YFL001W	RRP7	P25368	297 aa	Predicted RBP	4.86	□□□□□ -1.63
DEG1	YFL001W	TFB1	P32776	642 aa		4.86	□□□□□ -1.63
DEG1	YFL001W	YME1	P32795	747 aa		4.86	□□□□□ -1.63
DEG1	YFL001W	HCS1	P34243	683 aa		4.86	□□□□□ -1.63
DEG1	YFL001W	FTH1	P38310	465 aa		4.86	□□□□□ -1.63
DEG1	YFL001W	ERV46	P39727	415 aa		4.86	□□□□□ -1.63
DEG1	YFL001W	YEL020C	P39994	560 aa		4.86	□□□□□ -1.63
DEG1	YFL001W	YIL166C	P40445	542 aa		4.86	□□□□□ -1.63
DEG1	YFL001W	YJL043W	P47053	257 aa		4.86	□□□□□ -1.63
DEG1	YFL001W	MNP1	P53163	194 aa	Predicted RBP	4.86	□□□□□ -1.63
DEG1	YFL001W	PFA5	Q03289	374 aa		4.86	□□□□□ -1.63
DEG1	YFL001W	PDS5	Q04264	1277 aa		4.86	□□□□□ -1.63
DEG1	YFL001W	TAP42	Q04372	366 aa		4.86	□□□□□ -1.63
DEG1	YFL001W	TMN2	Q04562	672 aa		4.86	□□□□□ -1.63
DEG1	YFL001W	YDR286C	Q05530	114 aa		4.86	□□□□□ -1.63
DEG1	YFL001W	PGC1	Q08959	321 aa		4.86	□□□□□ -1.63
DEG1	YFL001W	GPM3	Q12326	303 aa		4.86	□□□□□ -1.63
DEG1	YFL001W	TY1B-DR3	Q99231	1755 aa		4.86	□□□□□ -1.63
DEG1	YFL001W	DNF1	P32660	1571 aa		4.85	□□□□□ -1.63
DEG1	YFL001W	BI2	P03873	423 aa		4.85	□□□□□ -1.63
DEG1	YFL001W	TKL1	P23254	680 aa	Known RBP	4.85	□□□□□ -1.63
DEG1	YFL001W	SAC1	P32368	623 aa	Known RBP	4.85	□□□□□ -1.63
DEG1	YFL001W	RML2	P32611	393 aa		4.85	□□□□□ -1.63
DEG1	YFL001W	YME2	P32843	850 aa		4.85	□□□□□ -1.63
DEG1	YFL001W	DBP8	P38719	431 aa		4.85	□□□□□ -1.63
DEG1	YFL001W	CIN4	P39110	191 aa		4.85	□□□□□ -1.63
DEG1	YFL001W	YJL107C	P42947	387 aa		4.85	□□□□□ -1.63
DEG1	YFL001W	ATP22	P50273	684 aa	Predicted RBP	4.85	□□□□□ -1.63
DEG1	YFL001W	BTN2	P53286	410 aa		4.85	□□□□□ -1.63
DEG1	YFL001W	CTF4	Q01454	927 aa		4.85	□□□□□ -1.63
DEG1	YFL001W	EMI2	Q04409	500 aa	Known RBP	4.85	□□□□□ -1.63
DEG1	YFL001W	DON1	Q05610	365 aa		4.85	□□□□□ -1.63
DEG1	YFL001W	YOR389W	Q08912	624 aa		4.85	□□□□□ -1.63
DEG1	YFL001W	SPE3	Q12074	293 aa	Known RBP	4.85	□□□□□ -1.63
DEG1	YFL001W	YLR049C	Q12110	428 aa		4.85	□□□□□ -1.63
DEG1	YFL001W	ESC1	Q03661	1658 aa	Known RBP	4.84	□□□□□ -1.63
DEG1	YFL001W	ADE5,7	P07244	802 aa	Known RBP	4.84	□□□□□ -1.63
DEG1	YFL001W	GPA1	P08539	472 aa		4.84	□□□□□ -1.63
DEG1	YFL001W	CLB2	P24869	491 aa		4.84	□□□□□ -1.63
DEG1	YFL001W	IDH2	P28241	369 aa	Known RBP	4.84	□□□□□ -1.63
DEG1	YFL001W	MGM1	P32266	881 aa		4.84	□□□□□ -1.63
DEG1	YFL001W	RPL32	P38061	130 aa	Known RBP	4.84	□□□□□ -1.63
DEG1	YFL001W	IMD2	P38697	523 aa	Known RBP	4.84	□□□□□ -1.63
DEG1	YFL001W	IMD3	P50095	523 aa	Known RBP	4.84	□□□□□ -1.63
DEG1	YFL001W	SLI1	P53304	468 aa		4.84	□□□□□ -1.63
DEG1	YFL001W	COQ9	Q05779	260 aa		4.84	□□□□□ -1.63
DEG1	YFL001W	RPS10A	Q08745	105 aa	Predicted RBP	4.84	□□□□□ -1.63
DEG1	YFL001W	SMF3	Q12078	473 aa	Predicted RBP	4.84	□□□□□ -1.63
DEG1	YFL001W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
DEG1	YFL001W	RDL1	Q12305	139 aa	Known RBP	4.84	□□□□□ -1.63
DEG1	YFL001W	TY1B-H	O13535	1793 aa		4.84	□□□□□ -1.63
DEG1	YFL001W	TY1B-DR5	P0C2I2	1755 aa		4.84	□□□□□ -1.63
DEG1	YFL001W	TY1B-DR6	P0C2I3	1755 aa		4.84	□□□□□ -1.63
DEG1	YFL001W	TY1B-LR2	P0C2I5	1755 aa		4.84	□□□□□ -1.63
DEG1	YFL001W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	4.84	□□□□□ -1.63
DEG1	YFL001W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	4.84	□□□□□ -1.63
DEG1	YFL001W	TY1B-PR2	P0C2J0	1756 aa		4.84	□□□□□ -1.63
DEG1	YFL001W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	4.84	□□□□□ -1.63
DEG1	YFL001W	TY1B-JR1	P47098	1755 aa		4.84	□□□□□ -1.63
DEG1	YFL001W	TY1B-ML2	Q03434	1755 aa	Known RBP	4.84	□□□□□ -1.63
DEG1	YFL001W	TY1B-ER1	Q03612	1755 aa		4.84	□□□□□ -1.63
DEG1	YFL001W	TY1B-ML1	Q04711	1755 aa	Known RBP	4.84	□□□□□ -1.63
DEG1	YFL001W	TY1B-GR2	Q12269	1755 aa		4.84	□□□□□ -1.63
DEG1	YFL001W	TY1B-OL	Q12273	1755 aa		4.84	□□□□□ -1.63
DEG1	YFL001W	TY1B-PL	Q12414	1755 aa	Known RBP	4.84	□□□□□ -1.63
DEG1	YFL001W	VTH1	P40438	1549 aa		4.84	□□□□□ -1.64
DEG1	YFL001W	VTH2	P40890	1549 aa		4.84	□□□□□ -1.64
DEG1	YFL001W	RPL31B	P0C2H9	113 aa	Known RBP	4.83	□□□□□ -1.64
DEG1	YFL001W	TUL1	P36096	758 aa		4.83	□□□□□ -1.64
DEG1	YFL001W	RRT2	P38332	387 aa		4.83	□□□□□ -1.64
DEG1	YFL001W	CIN1	P40987	1014 aa		4.83	□□□□□ -1.64
DEG1	YFL001W	STU2	P46675	888 aa		4.83	□□□□□ -1.64
DEG1	YFL001W	RPS10B	P46784	105 aa	Known RBP	4.83	□□□□□ -1.64
DEG1	YFL001W	NET1	P47035	1189 aa		4.83	□□□□□ -1.64
DEG1	YFL001W	ORC5	P50874	479 aa		4.83	□□□□□ -1.64
DEG1	YFL001W	YTP1	P53584	459 aa		4.83	□□□□□ -1.64
DEG1	YFL001W	YMR160W	Q03823	816 aa		4.83	□□□□□ -1.64
DEG1	YFL001W	CDC45	Q08032	650 aa		4.83	□□□□□ -1.64
DEG1	YFL001W	FRE3	Q08905	711 aa		4.83	□□□□□ -1.64
DEG1	YFL001W	YER145C-A	A0A023PYF4	145 aa		4.82	□□□□□ -1.64
DEG1	YFL001W	ARG81	P05085	880 aa		4.82	□□□□□ -1.64
DEG1	YFL001W	MSS51	P32335	436 aa		4.82	□□□□□ -1.64
DEG1	YFL001W	MTR2	P34232	184 aa	Known RBP	4.82	□□□□□ -1.64
DEG1	YFL001W	OCT1	P35999	772 aa		4.82	□□□□□ -1.64
DEG1	YFL001W	MIA40	P36046	403 aa		4.82	□□□□□ -1.64
DEG1	YFL001W	PXL1	P36166	706 aa		4.82	□□□□□ -1.64
DEG1	YFL001W	PIM1	P36775	1133 aa		4.82	□□□□□ -1.64
DEG1	YFL001W	THI2	P38141	450 aa		4.82	□□□□□ -1.64
DEG1	YFL001W	ARP1	P38696	384 aa		4.82	□□□□□ -1.64
DEG1	YFL001W	ANS1	P38832	159 aa		4.82	□□□□□ -1.64
DEG1	YFL001W	PAC2	P39937	518 aa		4.82	□□□□□ -1.64
DEG1	YFL001W	CUL3	P53202	744 aa		4.82	□□□□□ -1.64
DEG1	YFL001W	YGR111W	P53265	400 aa		4.82	□□□□□ -1.64
DEG1	YFL001W	CAF130	P53280	1122 aa	Predicted RBP	4.82	□□□□□ -1.64
DEG1	YFL001W	TOF2	Q02208	771 aa		4.82	□□□□□ -1.64
DEG1	YFL001W	RSF1	Q05043	376 aa		4.82	□□□□□ -1.64
DEG1	YFL001W	ECM30	Q06673	1274 aa		4.82	□□□□□ -1.64
DEG1	YFL001W	SKS1	Q12505	502 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms