RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W RPL3P14126 387 aaKnown RBP4.86□□□□□ -1.63
DEG1YFL001W ELO2P25358 347 aa4.86□□□□□ -1.63
DEG1YFL001W RRP7P25368 297 aaPredicted RBP4.86□□□□□ -1.63
DEG1YFL001W TFB1P32776 642 aa4.86□□□□□ -1.63
DEG1YFL001W YME1P32795 747 aa4.86□□□□□ -1.63
DEG1YFL001W HCS1P34243 683 aa4.86□□□□□ -1.63
DEG1YFL001W FTH1P38310 465 aa4.86□□□□□ -1.63
DEG1YFL001W ERV46P39727 415 aa4.86□□□□□ -1.63
DEG1YFL001W YEL020CP39994 560 aa4.86□□□□□ -1.63
DEG1YFL001W YIL166CP40445 542 aa4.86□□□□□ -1.63
DEG1YFL001W YJL043WP47053 257 aa4.86□□□□□ -1.63
DEG1YFL001W MNP1P53163 194 aaPredicted RBP4.86□□□□□ -1.63
DEG1YFL001W PFA5Q03289 374 aa4.86□□□□□ -1.63
DEG1YFL001W PDS5Q04264 1277 aa4.86□□□□□ -1.63
DEG1YFL001W TAP42Q04372 366 aa4.86□□□□□ -1.63
DEG1YFL001W TMN2Q04562 672 aa4.86□□□□□ -1.63
DEG1YFL001W YDR286CQ05530 114 aa4.86□□□□□ -1.63
DEG1YFL001W PGC1Q08959 321 aa4.86□□□□□ -1.63
DEG1YFL001W GPM3Q12326 303 aa4.86□□□□□ -1.63
DEG1YFL001W TY1B-DR3Q99231 1755 aa4.86□□□□□ -1.63
DEG1YFL001W DNF1P32660 1571 aa4.85□□□□□ -1.63
DEG1YFL001W BI2P03873 423 aa4.85□□□□□ -1.63
DEG1YFL001W TKL1P23254 680 aaKnown RBP4.85□□□□□ -1.63
DEG1YFL001W SAC1P32368 623 aaKnown RBP4.85□□□□□ -1.63
DEG1YFL001W RML2P32611 393 aa4.85□□□□□ -1.63
DEG1YFL001W YME2P32843 850 aa4.85□□□□□ -1.63
DEG1YFL001W DBP8P38719 431 aa4.85□□□□□ -1.63
DEG1YFL001W CIN4P39110 191 aa4.85□□□□□ -1.63
DEG1YFL001W YJL107CP42947 387 aa4.85□□□□□ -1.63
DEG1YFL001W ATP22P50273 684 aaPredicted RBP4.85□□□□□ -1.63
DEG1YFL001W BTN2P53286 410 aa4.85□□□□□ -1.63
DEG1YFL001W CTF4Q01454 927 aa4.85□□□□□ -1.63
DEG1YFL001W EMI2Q04409 500 aaKnown RBP4.85□□□□□ -1.63
DEG1YFL001W DON1Q05610 365 aa4.85□□□□□ -1.63
DEG1YFL001W YOR389WQ08912 624 aa4.85□□□□□ -1.63
DEG1YFL001W SPE3Q12074 293 aaKnown RBP4.85□□□□□ -1.63
DEG1YFL001W YLR049CQ12110 428 aa4.85□□□□□ -1.63
DEG1YFL001W ESC1Q03661 1658 aaKnown RBP4.84□□□□□ -1.63
DEG1YFL001W ADE5,7P07244 802 aaKnown RBP4.84□□□□□ -1.63
DEG1YFL001W GPA1P08539 472 aa4.84□□□□□ -1.63
DEG1YFL001W CLB2P24869 491 aa4.84□□□□□ -1.63
DEG1YFL001W IDH2P28241 369 aaKnown RBP4.84□□□□□ -1.63
DEG1YFL001W MGM1P32266 881 aa4.84□□□□□ -1.63
DEG1YFL001W RPL32P38061 130 aaKnown RBP4.84□□□□□ -1.63
DEG1YFL001W IMD2P38697 523 aaKnown RBP4.84□□□□□ -1.63
DEG1YFL001W IMD3P50095 523 aaKnown RBP4.84□□□□□ -1.63
DEG1YFL001W SLI1P53304 468 aa4.84□□□□□ -1.63
DEG1YFL001W COQ9Q05779 260 aa4.84□□□□□ -1.63
DEG1YFL001W RPS10AQ08745 105 aaPredicted RBP4.84□□□□□ -1.63
DEG1YFL001W SMF3Q12078 473 aaPredicted RBP4.84□□□□□ -1.63
DEG1YFL001W MSL5Q12186 476 aaKnown RBP RIP-Chip data4.84□□□□□ -1.63not detected
DEG1YFL001W RDL1Q12305 139 aaKnown RBP4.84□□□□□ -1.63
DEG1YFL001W TY1B-HO13535 1793 aa4.84□□□□□ -1.63
DEG1YFL001W TY1B-DR5P0C2I2 1755 aa4.84□□□□□ -1.63
DEG1YFL001W TY1B-DR6P0C2I3 1755 aa4.84□□□□□ -1.63
DEG1YFL001W TY1B-LR2P0C2I5 1755 aa4.84□□□□□ -1.63
DEG1YFL001W TY1B-LR3P0C2I6 1755 aaKnown RBP4.84□□□□□ -1.63
DEG1YFL001W TY1B-PR1P0C2I9 1755 aaKnown RBP4.84□□□□□ -1.63
DEG1YFL001W TY1B-PR2P0C2J0 1756 aa4.84□□□□□ -1.63
DEG1YFL001W TY1B-PR3P0C2J1 1755 aaKnown RBP4.84□□□□□ -1.63
DEG1YFL001W TY1B-JR1P47098 1755 aa4.84□□□□□ -1.63
DEG1YFL001W TY1B-ML2Q03434 1755 aaKnown RBP4.84□□□□□ -1.63
DEG1YFL001W TY1B-ER1Q03612 1755 aa4.84□□□□□ -1.63
DEG1YFL001W TY1B-ML1Q04711 1755 aaKnown RBP4.84□□□□□ -1.63
DEG1YFL001W TY1B-GR2Q12269 1755 aa4.84□□□□□ -1.63
DEG1YFL001W TY1B-OLQ12273 1755 aa4.84□□□□□ -1.63
DEG1YFL001W TY1B-PLQ12414 1755 aaKnown RBP4.84□□□□□ -1.63
DEG1YFL001W VTH1P40438 1549 aa4.84□□□□□ -1.64
DEG1YFL001W VTH2P40890 1549 aa4.84□□□□□ -1.64
DEG1YFL001W RPL31BP0C2H9 113 aaKnown RBP4.83□□□□□ -1.64
DEG1YFL001W TUL1P36096 758 aa4.83□□□□□ -1.64
DEG1YFL001W RRT2P38332 387 aa4.83□□□□□ -1.64
DEG1YFL001W CIN1P40987 1014 aa4.83□□□□□ -1.64
DEG1YFL001W STU2P46675 888 aa4.83□□□□□ -1.64
DEG1YFL001W RPS10BP46784 105 aaKnown RBP4.83□□□□□ -1.64
DEG1YFL001W NET1P47035 1189 aa4.83□□□□□ -1.64
DEG1YFL001W ORC5P50874 479 aa4.83□□□□□ -1.64
DEG1YFL001W YTP1P53584 459 aa4.83□□□□□ -1.64
DEG1YFL001W YMR160WQ03823 816 aa4.83□□□□□ -1.64
DEG1YFL001W CDC45Q08032 650 aa4.83□□□□□ -1.64
DEG1YFL001W FRE3Q08905 711 aa4.83□□□□□ -1.64
DEG1YFL001W YER145C-AA0A023PYF4 145 aa4.82□□□□□ -1.64
DEG1YFL001W ARG81P05085 880 aa4.82□□□□□ -1.64
DEG1YFL001W MSS51P32335 436 aa4.82□□□□□ -1.64
DEG1YFL001W MTR2P34232 184 aaKnown RBP4.82□□□□□ -1.64
DEG1YFL001W OCT1P35999 772 aa4.82□□□□□ -1.64
DEG1YFL001W MIA40P36046 403 aa4.82□□□□□ -1.64
DEG1YFL001W PXL1P36166 706 aa4.82□□□□□ -1.64
DEG1YFL001W PIM1P36775 1133 aa4.82□□□□□ -1.64
DEG1YFL001W THI2P38141 450 aa4.82□□□□□ -1.64
DEG1YFL001W ARP1P38696 384 aa4.82□□□□□ -1.64
DEG1YFL001W ANS1P38832 159 aa4.82□□□□□ -1.64
DEG1YFL001W PAC2P39937 518 aa4.82□□□□□ -1.64
DEG1YFL001W CUL3P53202 744 aa4.82□□□□□ -1.64
DEG1YFL001W YGR111WP53265 400 aa4.82□□□□□ -1.64
DEG1YFL001W CAF130P53280 1122 aaPredicted RBP4.82□□□□□ -1.64
DEG1YFL001W TOF2Q02208 771 aa4.82□□□□□ -1.64
DEG1YFL001W RSF1Q05043 376 aa4.82□□□□□ -1.64
DEG1YFL001W ECM30Q06673 1274 aa4.82□□□□□ -1.64
DEG1YFL001W SKS1Q12505 502 aa4.82□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms