RNA–Protein interactions for RNA: YDR255C

RMD5, Transcript of Component of GID Complex that confers ubiquitin ligase (U3) activity, yeast

Gene RMD5, Length 1,266 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RMD5	YDR255C	PEP5	P12868	1029 aa		4.78	□□□□□ -1.64
RMD5	YDR255C	PMS1	P14242	873 aa		4.78	□□□□□ -1.64
RMD5	YDR255C	KGD1	P20967	1014 aa	Known RBP	4.78	□□□□□ -1.64
RMD5	YDR255C	MTR2	P34232	184 aa	Known RBP	4.78	□□□□□ -1.64
RMD5	YDR255C	UBP11	P36026	717 aa		4.78	□□□□□ -1.64
RMD5	YDR255C	GUF1	P46943	645 aa		4.78	□□□□□ -1.64
RMD5	YDR255C	ALT2	P52892	507 aa		4.78	□□□□□ -1.64
RMD5	YDR255C	YPL014W	Q02606	381 aa		4.78	□□□□□ -1.64
RMD5	YDR255C	NGL3	Q03210	505 aa		4.78	□□□□□ -1.64
RMD5	YDR255C	GLO2	Q05584	274 aa		4.78	□□□□□ -1.64
RMD5	YDR255C	CTI6	Q08923	506 aa		4.78	□□□□□ -1.64
RMD5	YDR255C	ART10	P18634	518 aa	Known RBP	4.77	□□□□□ -1.65
RMD5	YDR255C	SGF29	P25554	259 aa		4.77	□□□□□ -1.65
RMD5	YDR255C	SEC1	P30619	724 aa	Known RBP	4.77	□□□□□ -1.65
RMD5	YDR255C	IMP2'	P32351	346 aa		4.77	□□□□□ -1.65
RMD5	YDR255C	REG2	P38232	338 aa		4.77	□□□□□ -1.65
RMD5	YDR255C	MAF1	P41910	395 aa		4.77	□□□□□ -1.65
RMD5	YDR255C	UPF3	P48412	387 aa	Known RBP	4.77	□□□□□ -1.65
RMD5	YDR255C	LCL3	P53153	274 aa		4.77	□□□□□ -1.65
RMD5	YDR255C	SAM50	P53969	484 aa		4.77	□□□□□ -1.65
RMD5	YDR255C	YJR112W-A	Q3E743	109 aa		4.77	□□□□□ -1.65
RMD5	YDR255C	YPT6	Q99260	215 aa		4.77	□□□□□ -1.65
RMD5	YDR255C	GCN4	P03069	281 aa		4.76	□□□□□ -1.65
RMD5	YDR255C	YML002W	P0CF17	737 aa		4.76	□□□□□ -1.65
RMD5	YDR255C	EST1	P17214	699 aa	Predicted RBP	4.76	□□□□□ -1.65
RMD5	YDR255C	SEC62	P21825	274 aa		4.76	□□□□□ -1.65
RMD5	YDR255C	PEP3	P27801	918 aa		4.76	□□□□□ -1.65
RMD5	YDR255C	SGS1	P35187	1447 aa		4.76	□□□□□ -1.65
RMD5	YDR255C	ALK1	P43633	760 aa	Known RBP	4.76	□□□□□ -1.65
RMD5	YDR255C	DSD1	P53095	428 aa		4.76	□□□□□ -1.65
RMD5	YDR255C	HOS2	P53096	452 aa	Predicted RBP	4.76	□□□□□ -1.65
RMD5	YDR255C	DIC1	Q06143	298 aa		4.76	□□□□□ -1.65
RMD5	YDR255C	THI20	Q08224	551 aa		4.76	□□□□□ -1.65
RMD5	YDR255C	TIP41	Q12199	356 aa		4.76	□□□□□ -1.65
RMD5	YDR255C	PRO3	P32263	286 aa	Known RBP	4.75	□□□□□ -1.65
RMD5	YDR255C	ECM15	P35195	104 aa		4.75	□□□□□ -1.65
RMD5	YDR255C	FMP46	P36141	133 aa	Known RBP	4.75	□□□□□ -1.65
RMD5	YDR255C	YHR210C	P38893	341 aa		4.75	□□□□□ -1.65
RMD5	YDR255C	CCT6	P39079	546 aa		4.75	□□□□□ -1.65
RMD5	YDR255C	CSM2	P40465	213 aa		4.75	□□□□□ -1.65
RMD5	YDR255C	RMD8	P43620	662 aa		4.75	□□□□□ -1.65
RMD5	YDR255C	RBG2	P53295	368 aa	Known RBP	4.75	□□□□□ -1.65
RMD5	YDR255C	FIN1	Q03898	291 aa		4.75	□□□□□ -1.65
RMD5	YDR255C	DAP1	Q12091	152 aa		4.75	□□□□□ -1.65
RMD5	YDR255C	PDH1	Q12428	516 aa	Known RBP	4.75	□□□□□ -1.65
RMD5	YDR255C	CBS1	P14066	229 aa		4.74	□□□□□ -1.65
RMD5	YDR255C	OLE1	P21147	510 aa	Known RBP	4.74	□□□□□ -1.65
RMD5	YDR255C	PAP1	P29468	568 aa	Known RBP	4.74	□□□□□ -1.65
RMD5	YDR255C	YER130C	P39959	443 aa		4.74	□□□□□ -1.65
RMD5	YDR255C	YJR154W	P47181	346 aa		4.74	□□□□□ -1.65
RMD5	YDR255C	IPI3	P53877	555 aa		4.74	□□□□□ -1.65
RMD5	YDR255C	MSC1	Q03104	513 aa		4.74	□□□□□ -1.65
RMD5	YDR255C	YDL057W	Q07379	328 aa		4.74	□□□□□ -1.65
RMD5	YDR255C	AVL9	Q12500	764 aa		4.74	□□□□□ -1.65
RMD5	YDR255C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
RMD5	YDR255C	OCA4	P25366	362 aa		4.73	□□□□□ -1.65
RMD5	YDR255C	CCT4	P39078	528 aa	Known RBP	4.73	□□□□□ -1.65
RMD5	YDR255C	MRX6	P48564	524 aa		4.73	□□□□□ -1.65
RMD5	YDR255C	TOF2	Q02208	771 aa		4.73	□□□□□ -1.65
RMD5	YDR255C	VPS38	Q05919	439 aa		4.73	□□□□□ -1.65
RMD5	YDR255C	BRR1	Q99177	341 aa	Predicted RBP	4.73	□□□□□ -1.65
RMD5	YDR255C	CAR1	P00812	333 aa	Known RBP	4.72	□□□□□ -1.65
RMD5	YDR255C	PDA1	P16387	420 aa	Known RBP	4.72	□□□□□ -1.65
RMD5	YDR255C	TIF3	P34167	436 aa	Known RBP	4.72	□□□□□ -1.65
RMD5	YDR255C	TCD2	P36101	447 aa	Known RBP	4.72	□□□□□ -1.65
RMD5	YDR255C	IKS1	P47042	667 aa		4.72	□□□□□ -1.65
RMD5	YDR255C	IMD4	P50094	524 aa	Known RBP	4.72	□□□□□ -1.65
RMD5	YDR255C	RBA50	Q04418	439 aa		4.72	□□□□□ -1.65
RMD5	YDR255C	RRI2	Q12348	645 aa		4.72	□□□□□ -1.65
RMD5	YDR255C	CYB2	P00175	591 aa		4.71	□□□□□ -1.66
RMD5	YDR255C	PHO2	P07269	559 aa		4.71	□□□□□ -1.66
RMD5	YDR255C	MRP13	P12686	339 aa		4.71	□□□□□ -1.66
RMD5	YDR255C	MTF1	P14908	341 aa	Known RBP	4.71	□□□□□ -1.66
RMD5	YDR255C	HSC82	P15108	705 aa	Known RBP	4.71	□□□□□ -1.66
RMD5	YDR255C	RPS2	P25443	254 aa	Known RBP	4.71	□□□□□ -1.66
RMD5	YDR255C	SHP1	P34223	423 aa		4.71	□□□□□ -1.66
RMD5	YDR255C	MDM31	P38880	579 aa		4.71	□□□□□ -1.66
RMD5	YDR255C	VPS75	P53853	264 aa		4.71	□□□□□ -1.66
RMD5	YDR255C	IMH1	Q06704	911 aa	Known RBP	4.71	□□□□□ -1.66
RMD5	YDR255C	BUD21	Q08492	214 aa	Predicted RBP	4.71	□□□□□ -1.66
RMD5	YDR255C	PPT2	Q12036	173 aa		4.71	□□□□□ -1.66
RMD5	YDR255C	HSH49	Q99181	213 aa	Predicted RBP	4.71	□□□□□ -1.66
RMD5	YDR255C	APE1	P14904	514 aa		4.7	□□□□□ -1.66
RMD5	YDR255C	EXO70	P19658	623 aa		4.7	□□□□□ -1.66
RMD5	YDR255C	YME1	P32795	747 aa		4.7	□□□□□ -1.66
RMD5	YDR255C	PTR2	P32901	601 aa		4.7	□□□□□ -1.66
RMD5	YDR255C	MSR1	P38714	643 aa		4.7	□□□□□ -1.66
RMD5	YDR255C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
RMD5	YDR255C	RPT6	Q01939	405 aa	Known RBP	4.7	□□□□□ -1.66
RMD5	YDR255C	THP1	Q08231	455 aa		4.7	□□□□□ -1.66
RMD5	YDR255C	YOR365C	Q08844	703 aa		4.7	□□□□□ -1.66
RMD5	YDR255C	YCR007C	P25354	239 aa		4.69	□□□□□ -1.66
RMD5	YDR255C	OSH3	P38713	996 aa	Known RBP	4.69	□□□□□ -1.66
RMD5	YDR255C	BUD32	P53323	261 aa		4.69	□□□□□ -1.66
RMD5	YDR255C	RPM2	Q02773	1202 aa		4.69	□□□□□ -1.66
RMD5	YDR255C	IVY1	Q04934	453 aa		4.69	□□□□□ -1.66
RMD5	YDR255C	RTT103	Q05543	409 aa		4.69	□□□□□ -1.66
RMD5	YDR255C	HCR1	Q05775	265 aa	Known RBP	4.69	□□□□□ -1.66
RMD5	YDR255C	NCE102	Q12207	173 aa	RIP-Chip data	4.69	□□□□□ -1.66	not detected
RMD5	YDR255C	RLM1	Q12224	676 aa		4.69	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 135.8 ms