RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C ECM30Q06673 1274 aa1.84□□□□□ -2.12
SWI5YDR146C RCN2Q12044 265 aa1.84□□□□□ -2.12
SWI5YDR146C ARP6Q12509 438 aa1.84□□□□□ -2.12
SWI5YDR146C SUC2P00724 532 aa1.83□□□□□ -2.12
SWI5YDR146C CBS1P14066 229 aa1.83□□□□□ -2.12
SWI5YDR146C AMD1P15274 810 aaKnown RBP1.83□□□□□ -2.12
SWI5YDR146C GLN3P18494 730 aa1.83□□□□□ -2.12
SWI5YDR146C MCM4P30665 933 aaKnown RBP1.83□□□□□ -2.12
SWI5YDR146C ACH1P32316 526 aa1.83□□□□□ -2.12
SWI5YDR146C ERG1P32476 496 aaKnown RBP1.83□□□□□ -2.12
SWI5YDR146C TCD2P36101 447 aaKnown RBP1.83□□□□□ -2.12
SWI5YDR146C RPL32P38061 130 aaKnown RBP1.83□□□□□ -2.12
SWI5YDR146C SRO77P38163 1010 aa1.83□□□□□ -2.12
SWI5YDR146C BZZ1P38822 633 aa1.83□□□□□ -2.12
SWI5YDR146C CIN4P39110 191 aa1.83□□□□□ -2.12
SWI5YDR146C MEP2P41948 499 aa1.83□□□□□ -2.12
SWI5YDR146C IMD4P50094 524 aaKnown RBP1.83□□□□□ -2.12
SWI5YDR146C YPL014WQ02606 381 aa1.83□□□□□ -2.12
SWI5YDR146C YMR160WQ03823 816 aa1.83□□□□□ -2.12
SWI5YDR146C MSS11Q03825 758 aa1.83□□□□□ -2.12
SWI5YDR146C FIN1Q03898 291 aa1.83□□□□□ -2.12
SWI5YDR146C GRS2Q06817 618 aa1.83□□□□□ -2.12
SWI5YDR146C RLM1Q12224 676 aa1.83□□□□□ -2.12
SWI5YDR146C GCN4P03069 281 aa1.82□□□□□ -2.12
SWI5YDR146C DFR1P07807 211 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
SWI5YDR146C ART10P18634 518 aaKnown RBP1.82□□□□□ -2.12
SWI5YDR146C MIC60P36112 540 aa1.82□□□□□ -2.12
SWI5YDR146C AZF1P41696 914 aa1.82□□□□□ -2.12
SWI5YDR146C IRC6P43615 237 aa1.82□□□□□ -2.12
SWI5YDR146C RMD8P43620 662 aa1.82□□□□□ -2.12
SWI5YDR146C VID30P53076 958 aa1.82□□□□□ -2.12
SWI5YDR146C BUD32P53323 261 aa1.82□□□□□ -2.12
SWI5YDR146C SAM50P53969 484 aa1.82□□□□□ -2.12
SWI5YDR146C RBA50Q04418 439 aa1.82□□□□□ -2.12
SWI5YDR146C MFB1Q04922 465 aa1.82□□□□□ -2.12
SWI5YDR146C BNA5Q05979 453 aa1.82□□□□□ -2.12
SWI5YDR146C SSK1Q07084 712 aa1.82□□□□□ -2.12
SWI5YDR146C TAH18Q12181 623 aa1.82□□□□□ -2.12
SWI5YDR146C RAD52P06778 471 aaKnown RBP1.82□□□□□ -2.12
SWI5YDR146C PEP5P12868 1029 aa1.82□□□□□ -2.12
SWI5YDR146C PPZ1P26570 692 aa1.82□□□□□ -2.12
SWI5YDR146C MRE11P32829 692 aa1.82□□□□□ -2.12
SWI5YDR146C SEF1P34228 1148 aa1.82□□□□□ -2.12
SWI5YDR146C ECM15P35195 104 aa1.82□□□□□ -2.12
SWI5YDR146C YKL023WP36103 277 aaKnown RBP1.82□□□□□ -2.12
SWI5YDR146C ICS2P38284 255 aa1.82□□□□□ -2.12
SWI5YDR146C NAB3P38996 802 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
SWI5YDR146C YTA12P40341 825 aa1.82□□□□□ -2.12
SWI5YDR146C YJL070CP40361 888 aa1.82□□□□□ -2.12
SWI5YDR146C SPO22P40511 975 aa1.82□□□□□ -2.12
SWI5YDR146C MAF1P41910 395 aa1.82□□□□□ -2.12
SWI5YDR146C PTR3P43606 678 aa1.82□□□□□ -2.12
SWI5YDR146C SNG1P46950 547 aa1.82□□□□□ -2.12
SWI5YDR146C YGR066CP53242 292 aa1.82□□□□□ -2.12
SWI5YDR146C YGR126WP53274 230 aa1.82□□□□□ -2.12
SWI5YDR146C SMM1P53720 384 aaKnown RBP1.82□□□□□ -2.12
SWI5YDR146C SLG1P54867 378 aa1.82□□□□□ -2.12
SWI5YDR146C FMP45Q07651 309 aa1.82□□□□□ -2.12
SWI5YDR146C PDH1Q12428 516 aaKnown RBP1.82□□□□□ -2.12
SWI5YDR146C PGA3Q12746 312 aaKnown RBP1.82□□□□□ -2.12
SWI5YDR146C EST1P17214 699 aaPredicted RBP1.81□□□□□ -2.12
SWI5YDR146C PRP2P20095 876 aaPredicted RBP1.81□□□□□ -2.12
SWI5YDR146C OCA4P25366 362 aa1.81□□□□□ -2.12
SWI5YDR146C SEC66P33754 206 aa1.81□□□□□ -2.12
SWI5YDR146C GCS1P35197 352 aa1.81□□□□□ -2.12
SWI5YDR146C RIM2P38127 377 aa1.81□□□□□ -2.12
SWI5YDR146C ROT2P38138 954 aa1.81□□□□□ -2.12
SWI5YDR146C RTT107P38850 1070 aa1.81□□□□□ -2.12
SWI5YDR146C TIF4631P39935 952 aaKnown RBP1.81□□□□□ -2.12
SWI5YDR146C ALG5P40350 334 aa1.81□□□□□ -2.12
SWI5YDR146C CSM2P40465 213 aa1.81□□□□□ -2.12
SWI5YDR146C MET18P40469 1032 aa1.81□□□□□ -2.12
SWI5YDR146C AXL1P40851 1208 aa1.81□□□□□ -2.12
SWI5YDR146C DIM1P41819 318 aaKnown RBP1.81□□□□□ -2.12
SWI5YDR146C ALT2P52892 507 aa1.81□□□□□ -2.12
SWI5YDR146C SCS3P53012 380 aa1.81□□□□□ -2.12
SWI5YDR146C JJJ1P53863 590 aa1.81□□□□□ -2.12
SWI5YDR146C IPI3P53877 555 aa1.81□□□□□ -2.12
SWI5YDR146C TDA7P53882 636 aaPredicted RBP1.81□□□□□ -2.12
SWI5YDR146C TAP42Q04372 366 aa1.81□□□□□ -2.12
SWI5YDR146C YMR317WQ04893 1140 aa1.81□□□□□ -2.12
SWI5YDR146C COG4Q06096 861 aa1.81□□□□□ -2.12
SWI5YDR146C NRT1Q08485 598 aa1.81□□□□□ -2.12
SWI5YDR146C AVL9Q12500 764 aa1.81□□□□□ -2.12
SWI5YDR146C CSR2Q12734 1121 aa1.81□□□□□ -2.12
SWI5YDR146C RTP1Q12751 981 aa1.81□□□□□ -2.12
SWI5YDR146C MRP7P12687 371 aa1.81□□□□□ -2.12
SWI5YDR146C PDA1P16387 420 aaKnown RBP1.81□□□□□ -2.12
SWI5YDR146C YCR007CP25354 239 aa1.81□□□□□ -2.12
SWI5YDR146C UBP11P36026 717 aa1.81□□□□□ -2.12
SWI5YDR146C TCM62P38228 572 aaKnown RBP1.81□□□□□ -2.12
SWI5YDR146C REG2P38232 338 aa1.81□□□□□ -2.12
SWI5YDR146C KEL1P38853 1164 aaKnown RBP1.81□□□□□ -2.12
SWI5YDR146C YAT2P40017 923 aa1.81□□□□□ -2.12
SWI5YDR146C YMR147WP40218 223 aaKnown RBP1.81□□□□□ -2.12
SWI5YDR146C ROK1P45818 564 aaPredicted RBP1.81□□□□□ -2.12
SWI5YDR146C STB2P46679 850 aa1.81□□□□□ -2.12
SWI5YDR146C PET130P47065 347 aa1.81□□□□□ -2.12
SWI5YDR146C SHR3Q02774 210 aa1.81□□□□□ -2.12
SWI5YDR146C VPS38Q05919 439 aa1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms