RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A NTE1Q04958 1679 aa-0.04□□□□□ -2.42
TFB5YDR079C-A RAD9P14737 1309 aa-0.04□□□□□ -2.42
TFB5YDR079C-A MAS2P11914 482 aa-0.04□□□□□ -2.42
TFB5YDR079C-A SRV2P17555 526 aaKnown RBP-0.04□□□□□ -2.42
TFB5YDR079C-A RIT1P23796 513 aa-0.04□□□□□ -2.42
TFB5YDR079C-A ELO2P25358 347 aa-0.04□□□□□ -2.42
TFB5YDR079C-A CMK1P27466 446 aaKnown RBP-0.04□□□□□ -2.42
TFB5YDR079C-A URK1P27515 501 aa-0.04□□□□□ -2.42
TFB5YDR079C-A KRE2P27809 442 aa-0.04□□□□□ -2.42
TFB5YDR079C-A ICL1P28240 557 aaPredicted RBP-0.04□□□□□ -2.42
TFB5YDR079C-A CHS3P29465 1165 aa-0.04□□□□□ -2.42
TFB5YDR079C-A RML2P32611 393 aa-0.04□□□□□ -2.42
TFB5YDR079C-A YKL050CP35736 922 aa-0.04□□□□□ -2.42
TFB5YDR079C-A KKQ8P36004 724 aa-0.04□□□□□ -2.42
TFB5YDR079C-A DTR1P38125 572 aa-0.04□□□□□ -2.42
TFB5YDR079C-A EAF5P39995 279 aa-0.04□□□□□ -2.42
TFB5YDR079C-A RPS29BP41058 56 aaKnown RBP-0.04□□□□□ -2.42
TFB5YDR079C-A MAL13P53338 473 aa-0.04□□□□□ -2.42
TFB5YDR079C-A TFB2Q02939 513 aa-0.04□□□□□ -2.42
TFB5YDR079C-A RSM10Q03201 203 aa-0.04□□□□□ -2.42
TFB5YDR079C-A GAS3Q03655 524 aa-0.04□□□□□ -2.42
TFB5YDR079C-A FAR10Q06001 478 aa-0.04□□□□□ -2.42
TFB5YDR079C-A NSE1Q07913 336 aa-0.04□□□□□ -2.42
TFB5YDR079C-A YOL024WQ08172 172 aa-0.04□□□□□ -2.42
TFB5YDR079C-A YOL029CQ08187 201 aa-0.04□□□□□ -2.42
TFB5YDR079C-A RDR1Q08904 546 aa-0.04□□□□□ -2.42
TFB5YDR079C-A YIL046W-AQ3E7Z4 54 aa-0.04□□□□□ -2.42
TFB5YDR079C-A BPT1P14772 1559 aa-0.04□□□□□ -2.42
TFB5YDR079C-A SNQ2P32568 1501 aaKnown RBP-0.04□□□□□ -2.42
TFB5YDR079C-A TCB3Q03640 1545 aaKnown RBP-0.04□□□□□ -2.42
TFB5YDR079C-A UFD4P33202 1483 aa-0.04□□□□□ -2.42
TFB5YDR079C-A TY3B-IQ7LHG5 1498 aaKnown RBP-0.04□□□□□ -2.42
TFB5YDR079C-A SNF2P22082 1703 aa-0.04□□□□□ -2.42
TFB5YDR079C-A TSC11P40061 1430 aa-0.04□□□□□ -2.42
TFB5YDR079C-A SSA3P09435 649 aaKnown RBP-0.05□□□□□ -2.42
TFB5YDR079C-A HEM15P16622 393 aa-0.05□□□□□ -2.42
TFB5YDR079C-A POL4P25615 582 aa-0.05□□□□□ -2.42
TFB5YDR079C-A MKK1P32490 508 aa-0.05□□□□□ -2.42
TFB5YDR079C-A SKG6P32900 734 aaPredicted RBP-0.05□□□□□ -2.42
TFB5YDR079C-A MRP4P32902 394 aa-0.05□□□□□ -2.42
TFB5YDR079C-A TCD2P36101 447 aaKnown RBP-0.05□□□□□ -2.42
TFB5YDR079C-A MRPS9P38120 278 aa-0.05□□□□□ -2.42
TFB5YDR079C-A DUG2P38149 878 aa-0.05□□□□□ -2.42
TFB5YDR079C-A YGP1P38616 354 aaKnown RBP-0.05□□□□□ -2.42
TFB5YDR079C-A AXL2P38928 823 aa-0.05□□□□□ -2.42
TFB5YDR079C-A PCF11P39081 626 aaPredicted RBP-0.05□□□□□ -2.42
TFB5YDR079C-A SSP120P39931 234 aaKnown RBP-0.05□□□□□ -2.42
TFB5YDR079C-A DJP1P40564 432 aa-0.05□□□□□ -2.42
TFB5YDR079C-A DUG1P43616 481 aaKnown RBP-0.05□□□□□ -2.42
TFB5YDR079C-A CTK2P46962 323 aa-0.05□□□□□ -2.42
TFB5YDR079C-A YJR030CP47101 745 aa-0.05□□□□□ -2.42
TFB5YDR079C-A ASE1P50275 885 aa-0.05□□□□□ -2.42
TFB5YDR079C-A EMI2Q04409 500 aaKnown RBP-0.05□□□□□ -2.42
TFB5YDR079C-A AIM32Q04689 311 aa-0.05□□□□□ -2.42
TFB5YDR079C-A RNH1Q04740 348 aa-0.05□□□□□ -2.42
TFB5YDR079C-A YLR456WQ06199 204 aa-0.05□□□□□ -2.42
TFB5YDR079C-A ICL2Q12031 575 aa-0.05□□□□□ -2.42
TFB5YDR079C-A TY3A-GQ12173 290 aa-0.05□□□□□ -2.42
TFB5YDR079C-A RVB2Q12464 471 aaKnown RBP-0.05□□□□□ -2.42
TFB5YDR079C-A YDR524C-BQ3E6R4 66 aa-0.05□□□□□ -2.42
TFB5YDR079C-A TY3A-IQ99219 290 aa-0.05□□□□□ -2.42
TFB5YDR079C-A YPL229WQ99395 206 aa-0.05□□□□□ -2.42
TFB5YDR079C-A YRF1-1P0CX20 1796 aa-0.05□□□□□ -2.42
TFB5YDR079C-A YRF1-5P0CX21 1796 aa-0.05□□□□□ -2.42
TFB5YDR079C-A YRF1-8P0CX22 1796 aa-0.05□□□□□ -2.42
TFB5YDR079C-A POL2P21951 2222 aaKnown RBP-0.05□□□□□ -2.42
TFB5YDR079C-A ULS1Q08562 1619 aa-0.05□□□□□ -2.42
TFB5YDR079C-A LYS2P07702 1392 aa-0.06□□□□□ -2.42
TFB5YDR079C-A ROM2P51862 1356 aaKnown RBP-0.06□□□□□ -2.42
TFB5YDR079C-A SSK2P53599 1579 aa-0.06□□□□□ -2.42
TFB5YDR079C-A TRA1P38811 3744 aa-0.06□□□□□ -2.42
TFB5YDR079C-A TY1B-AO13527 1196 aaKnown RBP-0.06□□□□□ -2.42
TFB5YDR079C-A CCW14O13547 238 aa-0.06□□□□□ -2.42
TFB5YDR079C-A CDC24P11433 854 aaPredicted RBP-0.06□□□□□ -2.42
TFB5YDR079C-A SEC63P14906 663 aa-0.06□□□□□ -2.42
TFB5YDR079C-A SPO7P18410 259 aa-0.06□□□□□ -2.42
TFB5YDR079C-A REC107P21651 314 aa-0.06□□□□□ -2.42
TFB5YDR079C-A RFA2P26754 273 aaKnown RBP-0.06□□□□□ -2.42
TFB5YDR079C-A BRF1P29056 596 aa-0.06□□□□□ -2.42
TFB5YDR079C-A TFB1P32776 642 aa-0.06□□□□□ -2.42
TFB5YDR079C-A SWE1P32944 819 aa-0.06□□□□□ -2.42
TFB5YDR079C-A PTK1P36002 662 aaPredicted RBP-0.06□□□□□ -2.42
TFB5YDR079C-A PRY2P36110 329 aa-0.06□□□□□ -2.42
TFB5YDR079C-A GPI16P38875 610 aa-0.06□□□□□ -2.42
TFB5YDR079C-A YER188WP40103 239 aa-0.06□□□□□ -2.42
TFB5YDR079C-A MOB1P40484 314 aa-0.06□□□□□ -2.42
TFB5YDR079C-A GAT4P40569 121 aa-0.06□□□□□ -2.42
TFB5YDR079C-A LIF1P53150 421 aa-0.06□□□□□ -2.42
TFB5YDR079C-A UBX4P54730 416 aa-0.06□□□□□ -2.42
TFB5YDR079C-A MDM1Q01846 1127 aa-0.06□□□□□ -2.42
TFB5YDR079C-A RLI1Q03195 608 aaKnown RBP-0.06□□□□□ -2.42
TFB5YDR079C-A INP2Q03824 705 aa-0.06□□□□□ -2.42
TFB5YDR079C-A API2Q04413 109 aa-0.06□□□□□ -2.42
TFB5YDR079C-A HRI1Q05905 244 aaKnown RBP-0.06□□□□□ -2.42
TFB5YDR079C-A MMR1Q06324 491 aa-0.06□□□□□ -2.42
TFB5YDR079C-A CDD1Q06549 142 aa-0.06□□□□□ -2.42
TFB5YDR079C-A VIP1Q06685 1146 aaKnown RBP-0.06□□□□□ -2.42
TFB5YDR079C-A TSR1Q07381 788 aaKnown RBP-0.06□□□□□ -2.42
TFB5YDR079C-A MSA1Q08471 629 aa-0.06□□□□□ -2.42
TFB5YDR079C-A CWC2Q12046 339 aaPredicted RBP-0.06□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms