RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C OLE1P21147 510 aaKnown RBP4.34□□□□□ -1.71
RRI1YDL216C SEC1P30619 724 aaKnown RBP4.34□□□□□ -1.71
RRI1YDL216C VPS17P32913 551 aa4.34□□□□□ -1.71
RRI1YDL216C SEF1P34228 1148 aa4.34□□□□□ -1.71
RRI1YDL216C UBP11P36026 717 aa4.34□□□□□ -1.71
RRI1YDL216C YJL068CP40363 299 aa4.34□□□□□ -1.71
RRI1YDL216C SNG1P46950 547 aa4.34□□□□□ -1.71
RRI1YDL216C DSD1P53095 428 aa4.34□□□□□ -1.71
RRI1YDL216C YGR066CP53242 292 aa4.34□□□□□ -1.71
RRI1YDL216C TDA7P53882 636 aaPredicted RBP4.34□□□□□ -1.71
RRI1YDL216C SHR3Q02774 210 aa4.34□□□□□ -1.71
RRI1YDL216C MSC1Q03104 513 aa4.34□□□□□ -1.71
RRI1YDL216C YMR317WQ04893 1140 aa4.34□□□□□ -1.71
RRI1YDL216C FMP45Q07651 309 aa4.34□□□□□ -1.71
RRI1YDL216C YJR112W-AQ3E743 109 aa4.34□□□□□ -1.71
RRI1YDL216C PEP5P12868 1029 aa4.33□□□□□ -1.72
RRI1YDL216C YER130CP39959 443 aa4.33□□□□□ -1.72
RRI1YDL216C ALG5P40350 334 aa4.33□□□□□ -1.72
RRI1YDL216C HOS2P53096 452 aaPredicted RBP4.33□□□□□ -1.72
RRI1YDL216C CRZ1P53968 678 aa4.33□□□□□ -1.72
RRI1YDL216C YPL014WQ02606 381 aa4.33□□□□□ -1.72
RRI1YDL216C DIC1Q06143 298 aa4.33□□□□□ -1.72
RRI1YDL216C BUD21Q08492 214 aaPredicted RBP4.33□□□□□ -1.72
RRI1YDL216C SGS1P35187 1447 aa4.32□□□□□ -1.72
RRI1YDL216C GCN4P03069 281 aa4.32□□□□□ -1.72
RRI1YDL216C PMS1P14242 873 aa4.32□□□□□ -1.72
RRI1YDL216C EST1P17214 699 aaPredicted RBP4.32□□□□□ -1.72
RRI1YDL216C TIF3P34167 436 aaKnown RBP4.32□□□□□ -1.72
RRI1YDL216C MRX6P48564 524 aa4.32□□□□□ -1.72
RRI1YDL216C ALT2P52892 507 aa4.32□□□□□ -1.72
RRI1YDL216C SAM50P53969 484 aa4.32□□□□□ -1.72
RRI1YDL216C GLO2Q05584 274 aa4.32□□□□□ -1.72
RRI1YDL216C IMH1Q06704 911 aaKnown RBP4.32□□□□□ -1.72
RRI1YDL216C THI20Q08224 551 aa4.32□□□□□ -1.72
RRI1YDL216C RRI2Q12348 645 aa4.32□□□□□ -1.72
RRI1YDL216C PDH1Q12428 516 aaKnown RBP4.32□□□□□ -1.72
RRI1YDL216C CBS1P14066 229 aa4.31□□□□□ -1.72
RRI1YDL216C RPS2P25443 254 aaKnown RBP4.31□□□□□ -1.72
RRI1YDL216C PEP3P27801 918 aa4.31□□□□□ -1.72
RRI1YDL216C RGT1P32862 1170 aa4.31□□□□□ -1.72
RRI1YDL216C ECM15P35195 104 aa4.31□□□□□ -1.72
RRI1YDL216C REG2P38232 338 aa4.31□□□□□ -1.72
RRI1YDL216C YHR210CP38893 341 aa4.31□□□□□ -1.72
RRI1YDL216C MAF1P41910 395 aa4.31□□□□□ -1.72
RRI1YDL216C YGL260WP53056 76 aa4.31□□□□□ -1.72
RRI1YDL216C FIN1Q03898 291 aa4.31□□□□□ -1.72
RRI1YDL216C DFR1P07807 211 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
RRI1YDL216C MRP13P12686 339 aa4.3□□□□□ -1.72
RRI1YDL216C SEC62P21825 274 aa4.3□□□□□ -1.72
RRI1YDL216C CSM2P40465 213 aa4.3□□□□□ -1.72
RRI1YDL216C ALK1P43633 760 aaKnown RBP4.3□□□□□ -1.72
RRI1YDL216C YJR154WP47181 346 aa4.3□□□□□ -1.72
RRI1YDL216C VPS75P53853 264 aa4.3□□□□□ -1.72
RRI1YDL216C IPI3P53877 555 aa4.3□□□□□ -1.72
RRI1YDL216C YDL057WQ07379 328 aa4.3□□□□□ -1.72
RRI1YDL216C DAP1Q12091 152 aa4.3□□□□□ -1.72
RRI1YDL216C AVL9Q12500 764 aa4.3□□□□□ -1.72
RRI1YDL216C YML002WP0CF17 737 aa4.29□□□□□ -1.72
RRI1YDL216C TCD2P36101 447 aaKnown RBP4.29□□□□□ -1.72
RRI1YDL216C FMP46P36141 133 aaKnown RBP4.29□□□□□ -1.72
RRI1YDL216C RMD8P43620 662 aa4.29□□□□□ -1.72
RRI1YDL216C IMD4P50094 524 aaKnown RBP4.29□□□□□ -1.72
RRI1YDL216C RBA50Q04418 439 aa4.29□□□□□ -1.72
RRI1YDL216C VPS38Q05919 439 aa4.29□□□□□ -1.72
RRI1YDL216C NCE102Q12207 173 aaRIP-Chip data4.29□□□□□ -1.72not detected
RRI1YDL216C PDA1P16387 420 aaKnown RBP4.28□□□□□ -1.72
RRI1YDL216C OCA4P25366 362 aa4.28□□□□□ -1.72
RRI1YDL216C PAP1P29468 568 aaKnown RBP4.28□□□□□ -1.72
RRI1YDL216C YBR225WP38321 900 aa4.28□□□□□ -1.72
RRI1YDL216C BUD32P53323 261 aa4.28□□□□□ -1.72
RRI1YDL216C TOF2Q02208 771 aa4.28□□□□□ -1.72
RRI1YDL216C YOR365CQ08844 703 aa4.28□□□□□ -1.72
RRI1YDL216C TIP41Q12199 356 aa4.28□□□□□ -1.72
RRI1YDL216C MED1Q12321 566 aa4.28□□□□□ -1.72
RRI1YDL216C HSH49Q99181 213 aaPredicted RBP4.28□□□□□ -1.72
RRI1YDL216C PEP4P07267 405 aaKnown RBP4.27□□□□□ -1.73
RRI1YDL216C APE1P14904 514 aa4.27□□□□□ -1.73
RRI1YDL216C HSC82P15108 705 aaKnown RBP4.27□□□□□ -1.73
RRI1YDL216C MET8P15807 274 aa4.27□□□□□ -1.73
RRI1YDL216C SHP1P34223 423 aa4.27□□□□□ -1.73
RRI1YDL216C MSR1P38714 643 aa4.27□□□□□ -1.73
RRI1YDL216C NAB3P38996 802 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
RRI1YDL216C IKS1P47042 667 aa4.27□□□□□ -1.73
RRI1YDL216C RBG2P53295 368 aaKnown RBP4.27□□□□□ -1.73
RRI1YDL216C RPM2Q02773 1202 aa4.27□□□□□ -1.73
RRI1YDL216C HCR1Q05775 265 aaKnown RBP4.27□□□□□ -1.73
RRI1YDL216C RLM1Q12224 676 aa4.27□□□□□ -1.73
RRI1YDL216C PRD1P25375 712 aa4.26□□□□□ -1.73
RRI1YDL216C PRO3P32263 286 aaKnown RBP4.26□□□□□ -1.73
RRI1YDL216C OSH3P38713 996 aaKnown RBP4.26□□□□□ -1.73
RRI1YDL216C CCT4P39078 528 aaKnown RBP4.26□□□□□ -1.73
RRI1YDL216C ARE2P53629 642 aaKnown RBP4.26□□□□□ -1.73
RRI1YDL216C COQ9Q05779 260 aa4.26□□□□□ -1.73
RRI1YDL216C THP1Q08231 455 aa4.26□□□□□ -1.73
RRI1YDL216C BRR1Q99177 341 aaPredicted RBP4.26□□□□□ -1.73
RRI1YDL216C CAR1P00812 333 aaKnown RBP4.25□□□□□ -1.73
RRI1YDL216C GAL80P04387 435 aa4.25□□□□□ -1.73
RRI1YDL216C PHO2P07269 559 aa4.25□□□□□ -1.73
RRI1YDL216C YME1P32795 747 aa4.25□□□□□ -1.73
RRI1YDL216C WBP1P33767 430 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms