RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W PSP2P50109 593 aaKnown RBP2.03□□□□□ -2.08
USO1YDL058W MEP3P53390 489 aa2.03□□□□□ -2.08
USO1YDL058W SLT2Q00772 484 aa2.03□□□□□ -2.08
USO1YDL058W YPL107WQ02873 248 aa2.03□□□□□ -2.08
USO1YDL058W YPR109WQ06104 294 aa2.03□□□□□ -2.08
USO1YDL058W YLR177WQ06251 628 aa2.03□□□□□ -2.08
USO1YDL058W GRS2Q06817 618 aa2.03□□□□□ -2.08
USO1YDL058W ISA2Q12425 185 aa2.03□□□□□ -2.08
USO1YDL058W RTN2Q12443 393 aa2.03□□□□□ -2.08
USO1YDL058W AI5_BETAQ9ZZX0 354 aa2.03□□□□□ -2.08
USO1YDL058W BNR1P40450 1375 aa2.03□□□□□ -2.08
USO1YDL058W SWI1P09547 1314 aa2.03□□□□□ -2.08
USO1YDL058W TY1B-JR2P47100 1755 aaKnown RBP2.03□□□□□ -2.08
USO1YDL058W TY1B-ER2Q03619 1755 aa2.03□□□□□ -2.08
USO1YDL058W TY1B-MR1Q04214 1755 aa2.03□□□□□ -2.08
USO1YDL058W TY1B-MR2Q04670 1755 aaKnown RBP2.03□□□□□ -2.08
USO1YDL058W TY1B-LR1Q12088 1755 aaKnown RBP2.03□□□□□ -2.08
USO1YDL058W TY1B-NL1Q12112 1755 aa2.03□□□□□ -2.08
USO1YDL058W TY1B-GR1Q12141 1755 aa2.03□□□□□ -2.08
USO1YDL058W TY1B-BLQ12490 1755 aa2.03□□□□□ -2.08
USO1YDL058W GAL1P04385 528 aa2.03□□□□□ -2.08
USO1YDL058W SRD1P09007 221 aa2.03□□□□□ -2.08
USO1YDL058W ARF1P11076 181 aaKnown RBP2.03□□□□□ -2.08
USO1YDL058W KIN2P13186 1147 aaKnown RBP2.03□□□□□ -2.08
USO1YDL058W MAG1P22134 296 aaKnown RBP2.03□□□□□ -2.08
USO1YDL058W YCK1P23291 538 aa2.03□□□□□ -2.08
USO1YDL058W MSS1P32559 526 aaPredicted RBP2.03□□□□□ -2.08
USO1YDL058W SPS19P32573 292 aaKnown RBP2.03□□□□□ -2.08
USO1YDL058W YKL107WP34251 309 aa2.03□□□□□ -2.08
USO1YDL058W HMT1P38074 348 aa2.03□□□□□ -2.08
USO1YDL058W YBR220CP38318 560 aa2.03□□□□□ -2.08
USO1YDL058W YHR022CP38763 256 aa2.03□□□□□ -2.08
USO1YDL058W CTF8P38877 133 aa2.03□□□□□ -2.08
USO1YDL058W YER158CP40095 573 aa2.03□□□□□ -2.08
USO1YDL058W YMR147WP40218 223 aaKnown RBP2.03□□□□□ -2.08
USO1YDL058W YJR061WP40355 935 aa2.03□□□□□ -2.08
USO1YDL058W RRD1P40454 393 aaKnown RBP2.03□□□□□ -2.08
USO1YDL058W SAE2P46946 345 aa2.03□□□□□ -2.08
USO1YDL058W YJR054WP47114 497 aa2.03□□□□□ -2.08
USO1YDL058W BUL1P48524 976 aa2.03□□□□□ -2.08
USO1YDL058W PHO23P50947 330 aa2.03□□□□□ -2.08
USO1YDL058W PCL10P53124 433 aa2.03□□□□□ -2.08
USO1YDL058W USE1P53146 245 aa2.03□□□□□ -2.08
USO1YDL058W VOA1P53262 265 aa2.03□□□□□ -2.08
USO1YDL058W RTT102P53330 157 aa2.03□□□□□ -2.08
USO1YDL058W CUS2P53830 285 aaPredicted RBP2.03□□□□□ -2.08
USO1YDL058W ALF1P53904 254 aa2.03□□□□□ -2.08
USO1YDL058W PEX30Q06169 523 aa2.03□□□□□ -2.08
USO1YDL058W PUS7Q08647 676 aaKnown RBP2.03□□□□□ -2.08
USO1YDL058W BUD7Q08754 746 aa2.03□□□□□ -2.08
USO1YDL058W FRE3Q08905 711 aa2.03□□□□□ -2.08
USO1YDL058W RPL7AP05737 244 aaKnown RBP2.03□□□□□ -2.08
USO1YDL058W CTT1P06115 562 aa2.03□□□□□ -2.08
USO1YDL058W MSF1P08425 469 aa2.03□□□□□ -2.08
USO1YDL058W NFS1P25374 497 aa2.03□□□□□ -2.08
USO1YDL058W RAD24P32641 659 aa2.03□□□□□ -2.08
USO1YDL058W SKT5P34226 696 aa2.03□□□□□ -2.08
USO1YDL058W YPT52P36018 234 aaKnown RBP2.03□□□□□ -2.08
USO1YDL058W YKL077WP36081 392 aa2.03□□□□□ -2.08
USO1YDL058W PFS1P38872 237 aa2.03□□□□□ -2.08
USO1YDL058W AKR1P39010 764 aa2.03□□□□□ -2.08
USO1YDL058W THO1P40040 218 aaKnown RBP2.03□□□□□ -2.08
USO1YDL058W DDI1P40087 428 aa2.03□□□□□ -2.08
USO1YDL058W COG3P40094 801 aa2.03□□□□□ -2.08
USO1YDL058W SLZ1P40167 298 aa2.03□□□□□ -2.08
USO1YDL058W SGN1P40561 250 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
USO1YDL058W MIC19P43594 170 aa2.03□□□□□ -2.08
USO1YDL058W YJR011CP47086 261 aaPredicted RBP2.03□□□□□ -2.08
USO1YDL058W HSH155P49955 971 aaKnown RBP2.03□□□□□ -2.08
USO1YDL058W PKP2P53170 491 aa2.03□□□□□ -2.08
USO1YDL058W RRN9P53437 365 aa2.03□□□□□ -2.08
USO1YDL058W MPA43P53583 542 aaPredicted RBP2.03□□□□□ -2.08
USO1YDL058W RPM2Q02773 1202 aa2.03□□□□□ -2.08
USO1YDL058W YMR102CQ03177 834 aa2.03□□□□□ -2.08
USO1YDL058W RUB1Q03919 77 aa2.03□□□□□ -2.08
USO1YDL058W SFH1Q06168 426 aa2.03□□□□□ -2.08
USO1YDL058W PSR1Q07800 427 aa2.03□□□□□ -2.08
USO1YDL058W ENT4Q07872 247 aa2.03□□□□□ -2.08
USO1YDL058W RPS10AQ08745 105 aaPredicted RBP2.03□□□□□ -2.08
USO1YDL058W UAF30Q08747 228 aa2.03□□□□□ -2.08
USO1YDL058W SRL2Q12020 392 aa2.03□□□□□ -2.08
USO1YDL058W ATG31Q12421 196 aa2.03□□□□□ -2.08
USO1YDL058W ARP6Q12509 438 aa2.03□□□□□ -2.08
USO1YDL058W SRF1Q12516 437 aa2.03□□□□□ -2.08
USO1YDL058W RAD9P14737 1309 aa2.03□□□□□ -2.08
USO1YDL058W SEC12P11655 471 aa2.03□□□□□ -2.09
USO1YDL058W ZRC1P20107 442 aa2.03□□□□□ -2.09
USO1YDL058W RNR3P21672 869 aaKnown RBP2.03□□□□□ -2.09
USO1YDL058W PCL2P25693 308 aa2.03□□□□□ -2.09
USO1YDL058W TRR1P29509 319 aaKnown RBP2.03□□□□□ -2.09
USO1YDL058W CCR4P31384 837 aaKnown RBP2.03□□□□□ -2.09
USO1YDL058W GCD7P32502 381 aaPredicted RBP2.03□□□□□ -2.09
USO1YDL058W STE14P32584 239 aa2.03□□□□□ -2.09
USO1YDL058W SPC29P33419 253 aa2.03□□□□□ -2.09
USO1YDL058W KDX1P36005 433 aa2.03□□□□□ -2.09
USO1YDL058W UGA2P38067 497 aa2.03□□□□□ -2.09
USO1YDL058W YBR225WP38321 900 aa2.03□□□□□ -2.09
USO1YDL058W DBP8P38719 431 aa2.03□□□□□ -2.09
USO1YDL058W SMF2P38778 549 aa2.03□□□□□ -2.09
USO1YDL058W MED6P38782 295 aa2.03□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms