RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeastyeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB1YCL054W EFM6P53970 246 aa2.72□□□□□ -1.97
SPB1YCL054W RNT1Q02555 471 aa2.72□□□□□ -1.97
SPB1YCL054W YPL107WQ02873 248 aa2.72□□□□□ -1.97
SPB1YCL054W PEX25Q02969 394 aa2.72□□□□□ -1.97
SPB1YCL054W MSC1Q03104 513 aa2.72□□□□□ -1.97
SPB1YCL054W YDR179W-AQ03983 463 aa2.72□□□□□ -1.97
SPB1YCL054W YDR109CQ04585 715 aa2.72□□□□□ -1.97
SPB1YCL054W SPE3Q12074 293 aaKnown RBP2.72□□□□□ -1.97
SPB1YCL054W LYS21Q12122 440 aaKnown RBP2.72□□□□□ -1.97
SPB1YCL054W NFI1Q12216 726 aa2.72□□□□□ -1.97
SPB1YCL054W AVL9Q12500 764 aa2.72□□□□□ -1.97
SPB1YCL054W SKS1Q12505 502 aa2.72□□□□□ -1.97
SPB1YCL054W SWI1P09547 1314 aa2.72□□□□□ -1.97
SPB1YCL054W FAS2P19097 1887 aaKnown RBP2.71□□□□□ -1.98
SPB1YCL054W CPR2P23285 205 aa2.71□□□□□ -1.98
SPB1YCL054W YJU2P28320 278 aaPredicted RBP2.71□□□□□ -1.98
SPB1YCL054W LAC1P28496 418 aa2.71□□□□□ -1.98
SPB1YCL054W SSE2P32590 693 aaKnown RBP2.71□□□□□ -1.98
SPB1YCL054W YMC2P38087 329 aa2.71□□□□□ -1.98
SPB1YCL054W SHC1P39000 512 aa2.71□□□□□ -1.98
SPB1YCL054W ECM10P39987 644 aa2.71□□□□□ -1.98
SPB1YCL054W PMT6P42934 759 aa2.71□□□□□ -1.98
SPB1YCL054W CTR1P49573 406 aa2.71□□□□□ -1.98
SPB1YCL054W VPS73P53142 486 aaKnown RBP2.71□□□□□ -1.98
SPB1YCL054W ART5P53244 586 aaKnown RBP2.71□□□□□ -1.98
SPB1YCL054W HEL2Q05580 639 aaKnown RBP2.71□□□□□ -1.98
SPB1YCL054W FRE6Q12473 712 aa2.71□□□□□ -1.98
SPB1YCL054W CHO1P08456 276 aa2.71□□□□□ -1.98
SPB1YCL054W ABF1P14164 731 aa2.71□□□□□ -1.98
SPB1YCL054W MDH1P17505 334 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
SPB1YCL054W PUP3P25451 205 aaKnown RBP2.71□□□□□ -1.98
SPB1YCL054W PMI40P29952 429 aaKnown RBP2.71□□□□□ -1.98
SPB1YCL054W GSH1P32477 678 aa2.71□□□□□ -1.98
SPB1YCL054W SNU114P36048 1008 aaKnown RBP2.71□□□□□ -1.98
SPB1YCL054W VBA2P38358 474 aaKnown RBP2.71□□□□□ -1.98
SPB1YCL054W VPS41P38959 992 aa2.71□□□□□ -1.98
SPB1YCL054W SAP1P39955 897 aaKnown RBP2.71□□□□□ -1.98
SPB1YCL054W SSU1P41930 458 aa2.71□□□□□ -1.98
SPB1YCL054W YFR020WP43600 232 aa2.71□□□□□ -1.98
SPB1YCL054W YGL117WP53133 265 aa2.71□□□□□ -1.98
SPB1YCL054W BOP3P53958 396 aa2.71□□□□□ -1.98
SPB1YCL054W GYL1Q04322 720 aa2.71□□□□□ -1.98
SPB1YCL054W AFI1Q99222 893 aa2.71□□□□□ -1.98
SPB1YCL054W SSK22P25390 1331 aaPredicted RBP2.71□□□□□ -1.98
SPB1YCL054W REC107P21651 314 aa2.7□□□□□ -1.98
SPB1YCL054W HRR25P29295 494 aaKnown RBP2.7□□□□□ -1.98
SPB1YCL054W MGM1P32266 881 aa2.7□□□□□ -1.98
SPB1YCL054W LOT5P34234 306 aa2.7□□□□□ -1.98
SPB1YCL054W RPF2P36160 344 aaKnown RBP2.7□□□□□ -1.98
SPB1YCL054W DIA4P38705 446 aaPredicted RBP2.7□□□□□ -1.98
SPB1YCL054W ELO1P39540 310 aa2.7□□□□□ -1.98
SPB1YCL054W GDI1P39958 451 aaKnown RBP2.7□□□□□ -1.98
SPB1YCL054W DCP2P53550 970 aaKnown RBP2.7□□□□□ -1.98
SPB1YCL054W RSF1Q05043 376 aa2.7□□□□□ -1.98
SPB1YCL054W RAD34Q06665 692 aa2.7□□□□□ -1.98
SPB1YCL054W YOL073CQ08232 322 aa2.7□□□□□ -1.98
SPB1YCL054W UAF30Q08747 228 aa2.7□□□□□ -1.98
SPB1YCL054W RPN5Q12250 445 aaKnown RBP2.7□□□□□ -1.98
SPB1YCL054W TAO3P40468 2376 aa2.7□□□□□ -1.98
SPB1YCL054W PDA1P16387 420 aaKnown RBP2.7□□□□□ -1.98
SPB1YCL054W RML2P32611 393 aa2.7□□□□□ -1.98
SPB1YCL054W RAD24P32641 659 aa2.7□□□□□ -1.98
SPB1YCL054W YBR144CP34215 104 aa2.7□□□□□ -1.98
SPB1YCL054W POP2P39008 433 aa2.7□□□□□ -1.98
SPB1YCL054W FUN12P39730 1002 aaKnown RBP2.7□□□□□ -1.98
SPB1YCL054W BUR6P40096 142 aa2.7□□□□□ -1.98
SPB1YCL054W HXT14P42833 540 aa2.7□□□□□ -1.98
SPB1YCL054W TDA10P42938 290 aa2.7□□□□□ -1.98
SPB1YCL054W FET5P43561 622 aa2.7□□□□□ -1.98
SPB1YCL054W DLD2P46681 530 aaKnown RBP2.7□□□□□ -1.98
SPB1YCL054W RPS10BP46784 105 aaKnown RBP2.7□□□□□ -1.98
SPB1YCL054W DPB11P47027 764 aaPredicted RBP2.7□□□□□ -1.98
SPB1YCL054W IRC8P47046 822 aa2.7□□□□□ -1.98
SPB1YCL054W FMS1P50264 508 aa2.7□□□□□ -1.98
SPB1YCL054W COQ6P53318 479 aa2.7□□□□□ -1.98
SPB1YCL054W YPR003CP53394 754 aa2.7□□□□□ -1.98
SPB1YCL054W YDR239CQ03780 787 aa2.7□□□□□ -1.98
SPB1YCL054W PLM2Q04383 521 aa2.7□□□□□ -1.98
SPB1YCL054W COQ9Q05779 260 aa2.7□□□□□ -1.98
SPB1YCL054W FMP40Q08968 688 aaPredicted RBP2.7□□□□□ -1.98
SPB1YCL054W TGS1Q12052 315 aa2.7□□□□□ -1.98
SPB1YCL054W YLR278CQ05854 1341 aa2.69□□□□□ -1.98
SPB1YCL054W RPP0P05317 312 aaKnown RBP2.69□□□□□ -1.98
SPB1YCL054W GLK1P17709 500 aaKnown RBP2.69□□□□□ -1.98
SPB1YCL054W DAP2P18962 818 aa2.69□□□□□ -1.98
SPB1YCL054W APN1P22936 367 aa2.69□□□□□ -1.98
SPB1YCL054W GEX1P25596 615 aa2.69□□□□□ -1.98
SPB1YCL054W GMH1P36125 273 aa2.69□□□□□ -1.98
SPB1YCL054W AGP2P38090 596 aa2.69□□□□□ -1.98
SPB1YCL054W ADH5P38113 351 aaKnown RBP2.69□□□□□ -1.98
SPB1YCL054W UIP3P39547 235 aa2.69□□□□□ -1.98
SPB1YCL054W SER3P40054 469 aa2.69□□□□□ -1.98
SPB1YCL054W NDC80P40460 691 aa2.69□□□□□ -1.98
SPB1YCL054W CDC1P40986 491 aa2.69□□□□□ -1.98
SPB1YCL054W GCD10P41814 478 aa2.69□□□□□ -1.98
SPB1YCL054W YJL107CP42947 387 aa2.69□□□□□ -1.98
SPB1YCL054W YFL015CP43578 164 aa2.69□□□□□ -1.98
SPB1YCL054W ECM27P47144 725 aa2.69□□□□□ -1.98
SPB1YCL054W RPT4P53549 437 aaKnown RBP2.69□□□□□ -1.98
SPB1YCL054W KTR5P53966 522 aaPredicted RBP2.69□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms