RNA–Protein interactions for RNA: YCL001W

RER1, Transcript of Protein involved in retention of membrane proteins, yeastyeast

Gene RER1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RER1YCL001W TAN1P53072 289 aaPredicted RBP4.66□□□□□ -1.66
RER1YCL001W COG4Q06096 861 aa4.66□□□□□ -1.66
RER1YCL001W PKH2Q12236 1081 aaKnown RBP4.66□□□□□ -1.66
RER1YCL001W GIS3Q12418 502 aa4.66□□□□□ -1.66
RER1YCL001W YER175W-AQ8TGU4 54 aa4.66□□□□□ -1.66
RER1YCL001W ASP3-2P0CX77 362 aa4.65□□□□□ -1.67
RER1YCL001W ASP3-3P0CX78 362 aa4.65□□□□□ -1.67
RER1YCL001W ASP3-4P0CX79 362 aa4.65□□□□□ -1.67
RER1YCL001W ASP3-1P0CZ17 362 aa4.65□□□□□ -1.67
RER1YCL001W YCR043CP25361 127 aa4.65□□□□□ -1.67
RER1YCL001W PRR1P28708 518 aa4.65□□□□□ -1.67
RER1YCL001W MUD1P32605 298 aaKnown RBP4.65□□□□□ -1.67
RER1YCL001W HEL1P36113 551 aa4.65□□□□□ -1.67
RER1YCL001W YER130CP39959 443 aa4.65□□□□□ -1.67
RER1YCL001W RTS3P53289 263 aa4.65□□□□□ -1.67
RER1YCL001W MLC2Q06580 163 aa4.65□□□□□ -1.67
RER1YCL001W SHS1Q07657 551 aa4.65□□□□□ -1.67
RER1YCL001W CTF3Q12748 733 aa4.65□□□□□ -1.67
RER1YCL001W YLR422WQ06409 1932 aa4.65□□□□□ -1.67
RER1YCL001W RPL4AP10664 362 aaKnown RBP4.64□□□□□ -1.67
RER1YCL001W PTP2P29461 750 aa4.64□□□□□ -1.67
RER1YCL001W KDX1P36005 433 aa4.64□□□□□ -1.67
RER1YCL001W TOS3P43637 560 aa4.64□□□□□ -1.67
RER1YCL001W AIP1P46680 615 aaKnown RBP4.64□□□□□ -1.67
RER1YCL001W FYV8P46949 817 aaKnown RBP4.64□□□□□ -1.67
RER1YCL001W POL31P46957 487 aa4.64□□□□□ -1.67
RER1YCL001W PUS4P48567 403 aaKnown RBP4.64□□□□□ -1.67
RER1YCL001W RPL4BP49626 362 aaKnown RBP4.64□□□□□ -1.67
RER1YCL001W HSH155P49955 971 aaKnown RBP4.64□□□□□ -1.67
RER1YCL001W NOP13P53883 403 aaKnown RBP RIP-Chip data4.64□□□□□ -1.67not detected
RER1YCL001W TIM8P57744 87 aa4.64□□□□□ -1.67
RER1YCL001W YAT1P80235 687 aa4.64□□□□□ -1.67
RER1YCL001W CEG1Q01159 459 aaPredicted RBP4.64□□□□□ -1.67
RER1YCL001W PIG1Q06216 648 aa4.64□□□□□ -1.67
RER1YCL001W MLH2Q07980 695 aa4.64□□□□□ -1.67
RER1YCL001W TLG2Q08144 397 aa4.64□□□□□ -1.67
RER1YCL001W PLP2Q12017 286 aa4.64□□□□□ -1.67
RER1YCL001W SPE3Q12074 293 aaKnown RBP4.64□□□□□ -1.67
RER1YCL001W DBP10Q12389 995 aaKnown RBP4.64□□□□□ -1.67
RER1YCL001W GAL80P04387 435 aa4.63□□□□□ -1.67
RER1YCL001W TPK1P06244 397 aa4.63□□□□□ -1.67
RER1YCL001W OM45P16547 393 aa4.63□□□□□ -1.67
RER1YCL001W CNA1P23287 553 aa4.63□□□□□ -1.67
RER1YCL001W SAC6P32599 642 aaKnown RBP4.63□□□□□ -1.67
RER1YCL001W SCO2P38072 301 aa4.63□□□□□ -1.67
RER1YCL001W ARC40P38328 384 aaKnown RBP4.63□□□□□ -1.67
RER1YCL001W EFM2P38347 419 aa4.63□□□□□ -1.67
RER1YCL001W VBA2P38358 474 aaKnown RBP4.63□□□□□ -1.67
RER1YCL001W CTM1P38818 585 aa4.63□□□□□ -1.67
RER1YCL001W RSM25P40496 264 aa4.63□□□□□ -1.67
RER1YCL001W HIS6P40545 261 aa4.63□□□□□ -1.67
RER1YCL001W YJL107CP42947 387 aa4.63□□□□□ -1.67
RER1YCL001W GIS2P53849 153 aaKnown RBP RIP-Chip data4.63□□□□□ -1.67not detected
RER1YCL001W RPA49Q01080 415 aaPredicted RBP4.63□□□□□ -1.67
RER1YCL001W ADA2Q02336 434 aa4.63□□□□□ -1.67
RER1YCL001W CWC21Q03375 135 aaKnown RBP4.63□□□□□ -1.67
RER1YCL001W YPL191CQ08930 360 aa4.63□□□□□ -1.67
RER1YCL001W YOL114CQ12322 202 aa4.63□□□□□ -1.67
RER1YCL001W ARP7Q12406 477 aa4.63□□□□□ -1.67
RER1YCL001W RRI1Q12468 440 aa4.63□□□□□ -1.67
RER1YCL001W ADH4P10127 382 aa4.62□□□□□ -1.67
RER1YCL001W CDC42P19073 191 aa4.62□□□□□ -1.67
RER1YCL001W VPS3P23643 1011 aa4.62□□□□□ -1.67
RER1YCL001W MSP1P28737 362 aa4.62□□□□□ -1.67
RER1YCL001W PRE2P30656 287 aaKnown RBP4.62□□□□□ -1.67
RER1YCL001W SWI3P32591 825 aa4.62□□□□□ -1.67
RER1YCL001W YKL023WP36103 277 aaKnown RBP4.62□□□□□ -1.67
RER1YCL001W TES1P41903 349 aaKnown RBP4.62□□□□□ -1.67
RER1YCL001W COS5P47187 383 aa4.62□□□□□ -1.67
RER1YCL001W ACS1Q01574 713 aa4.62□□□□□ -1.67
RER1YCL001W TRS31Q03337 283 aa4.62□□□□□ -1.67
RER1YCL001W TRI1Q05024 226 aa4.62□□□□□ -1.67
RER1YCL001W CDD1Q06549 142 aa4.62□□□□□ -1.67
RER1YCL001W GRS2Q06817 618 aa4.62□□□□□ -1.67
RER1YCL001W YOL075CQ08234 1294 aa4.62□□□□□ -1.67
RER1YCL001W RRP6Q12149 733 aaKnown RBP4.62□□□□□ -1.67
RER1YCL001W CHS1P08004 1131 aa4.61□□□□□ -1.67
RER1YCL001W APE1P14904 514 aa4.61□□□□□ -1.67
RER1YCL001W PGS1P25578 521 aa4.61□□□□□ -1.67
RER1YCL001W GSH1P32477 678 aa4.61□□□□□ -1.67
RER1YCL001W ADE17P38009 592 aaKnown RBP4.61□□□□□ -1.67
RER1YCL001W NPR3P38742 1146 aa4.61□□□□□ -1.67
RER1YCL001W SWD1P39706 426 aa4.61□□□□□ -1.67
RER1YCL001W KAP123P40069 1113 aaKnown RBP4.61□□□□□ -1.67
RER1YCL001W UBP7P40453 1071 aa4.61□□□□□ -1.67
RER1YCL001W MOB1P40484 314 aa4.61□□□□□ -1.67
RER1YCL001W SMC3P47037 1230 aa4.61□□□□□ -1.67
RER1YCL001W EBS1Q03466 884 aaKnown RBP4.61□□□□□ -1.67
RER1YCL001W GIR2Q03768 265 aaPredicted RBP4.61□□□□□ -1.67
RER1YCL001W PPM1Q04081 328 aa4.61□□□□□ -1.67
RER1YCL001W IWR1Q07532 353 aaPredicted RBP4.61□□□□□ -1.67
RER1YCL001W SNF1P06782 633 aaKnown RBP4.6□□□□□ -1.67
RER1YCL001W PSO2P30620 661 aa4.6□□□□□ -1.67
RER1YCL001W RPN12P32496 274 aa4.6□□□□□ -1.67
RER1YCL001W IME2P32581 645 aa4.6□□□□□ -1.67
RER1YCL001W ARN1P38731 627 aa4.6□□□□□ -1.67
RER1YCL001W DSE1P40077 573 aa4.6□□□□□ -1.67
RER1YCL001W IMA5P40884 581 aa4.6□□□□□ -1.67
RER1YCL001W QRI7P43122 407 aa4.6□□□□□ -1.67
RER1YCL001W CPR7P47103 393 aa4.6□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms