RNA–Protein interactions for RNA: YBR204C

LDH1, Transcript of Serine hydrolase, yeast

Gene LDH1, Length 1,128 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDH1	YBR204C	PRD1	P25375	712 aa		4.06	□□□□□ -1.76
LDH1	YBR204C	WBP1	P33767	430 aa	Known RBP	4.06	□□□□□ -1.76
LDH1	YBR204C	ROT2	P38138	954 aa		4.06	□□□□□ -1.76
LDH1	YBR204C	ARC40	P38328	384 aa	Known RBP	4.06	□□□□□ -1.76
LDH1	YBR204C	LAG1	P38703	411 aa		4.06	□□□□□ -1.76
LDH1	YBR204C	NOC2	P39744	710 aa	Known RBP	4.06	□□□□□ -1.76
LDH1	YBR204C	FET5	P43561	622 aa		4.06	□□□□□ -1.76
LDH1	YBR204C	ROK1	P45818	564 aa	Predicted RBP	4.06	□□□□□ -1.76
LDH1	YBR204C	YGR126W	P53274	230 aa		4.06	□□□□□ -1.76
LDH1	YBR204C	YVH1	Q02256	364 aa	Known RBP	4.06	□□□□□ -1.76
LDH1	YBR204C	YMR160W	Q03823	816 aa		4.06	□□□□□ -1.76
LDH1	YBR204C	YMR254C	Q04838	102 aa		4.06	□□□□□ -1.76
LDH1	YBR204C	YMR034C	Q05131	434 aa	Predicted RBP	4.06	□□□□□ -1.76
LDH1	YBR204C	CDC45	Q08032	650 aa		4.06	□□□□□ -1.76
LDH1	YBR204C	FOB1	O13329	566 aa		4.05	□□□□□ -1.76
LDH1	YBR204C	SUI2	P20459	304 aa	Known RBP	4.05	□□□□□ -1.76
LDH1	YBR204C	MGR1	P25573	417 aa		4.05	□□□□□ -1.76
LDH1	YBR204C	SNC1	P31109	117 aa		4.05	□□□□□ -1.76
LDH1	YBR204C	MRE11	P32829	692 aa		4.05	□□□□□ -1.76
LDH1	YBR204C	GCS1	P35197	352 aa		4.05	□□□□□ -1.76
LDH1	YBR204C	PHD1	P36093	366 aa		4.05	□□□□□ -1.76
LDH1	YBR204C	DOT5	P40553	215 aa		4.05	□□□□□ -1.76
LDH1	YBR204C	PET130	P47065	347 aa		4.05	□□□□□ -1.76
LDH1	YBR204C	SMM1	P53720	384 aa	Known RBP	4.05	□□□□□ -1.76
LDH1	YBR204C	DUG3	P53871	357 aa		4.05	□□□□□ -1.76
LDH1	YBR204C	COQ9	Q05779	260 aa		4.05	□□□□□ -1.76
LDH1	YBR204C	YLR281C	Q05863	155 aa		4.05	□□□□□ -1.76
LDH1	YBR204C	SSK1	Q07084	712 aa		4.05	□□□□□ -1.76
LDH1	YBR204C	SNA4	Q07549	140 aa		4.05	□□□□□ -1.76
LDH1	YBR204C	APL5	Q08951	932 aa	Known RBP	4.05	□□□□□ -1.76
LDH1	YBR204C	NCE102	Q12207	173 aa	RIP-Chip data	4.05	□□□□□ -1.76	not detected
LDH1	YBR204C	MET17	P06106	444 aa		4.04	□□□□□ -1.76
LDH1	YBR204C	MCM4	P30665	933 aa	Known RBP	4.04	□□□□□ -1.76
LDH1	YBR204C	YKL023W	P36103	277 aa	Known RBP	4.04	□□□□□ -1.76
LDH1	YBR204C	SPC34	P36131	295 aa		4.04	□□□□□ -1.76
LDH1	YBR204C	MUM2	P38236	366 aa		4.04	□□□□□ -1.76
LDH1	YBR204C	ERG7	P38604	731 aa		4.04	□□□□□ -1.76
LDH1	YBR204C	MSR1	P38714	643 aa		4.04	□□□□□ -1.76
LDH1	YBR204C	MET18	P40469	1032 aa		4.04	□□□□□ -1.76
LDH1	YBR204C	SNG1	P46950	547 aa		4.04	□□□□□ -1.76
LDH1	YBR204C	JJJ1	P53863	590 aa		4.04	□□□□□ -1.76
LDH1	YBR204C	SRL1	Q08673	210 aa		4.04	□□□□□ -1.76
LDH1	YBR204C	ARP6	Q12509	438 aa		4.04	□□□□□ -1.76
LDH1	YBR204C	PEP5	P12868	1029 aa		4.03	□□□□□ -1.76
LDH1	YBR204C	ROX1	P25042	368 aa		4.03	□□□□□ -1.76
LDH1	YBR204C	ELO2	P25358	347 aa		4.03	□□□□□ -1.76
LDH1	YBR204C	YCR043C	P25361	127 aa		4.03	□□□□□ -1.76
LDH1	YBR204C	RPS2	P25443	254 aa	Known RBP	4.03	□□□□□ -1.76
LDH1	YBR204C	CST26	P38226	397 aa		4.03	□□□□□ -1.76
LDH1	YBR204C	VID24	P38263	362 aa		4.03	□□□□□ -1.76
LDH1	YBR204C	YHR210C	P38893	341 aa		4.03	□□□□□ -1.76
LDH1	YBR204C	TOF2	Q02208	771 aa		4.03	□□□□□ -1.76
LDH1	YBR204C	YPL014W	Q02606	381 aa		4.03	□□□□□ -1.76
LDH1	YBR204C	SMA1	Q02651	245 aa		4.03	□□□□□ -1.76
LDH1	YBR204C	MRD1	Q06106	887 aa	Known RBP	4.03	□□□□□ -1.76
LDH1	YBR204C	YDL057W	Q07379	328 aa		4.03	□□□□□ -1.76
LDH1	YBR204C	BSC1	Q12140	328 aa		4.03	□□□□□ -1.76
LDH1	YBR204C	SCM3	Q12334	223 aa		4.03	□□□□□ -1.76
LDH1	YBR204C	GRX6	Q12438	231 aa		4.03	□□□□□ -1.76
LDH1	YBR204C	PEP4	P07267	405 aa	Known RBP	4.02	□□□□□ -1.77
LDH1	YBR204C	RED1	P14291	827 aa		4.02	□□□□□ -1.77
LDH1	YBR204C	YME1	P32795	747 aa		4.02	□□□□□ -1.77
LDH1	YBR204C	RKM3	P38222	552 aa		4.02	□□□□□ -1.77
LDH1	YBR204C	MET30	P39014	640 aa		4.02	□□□□□ -1.77
LDH1	YBR204C	CCT4	P39078	528 aa	Known RBP	4.02	□□□□□ -1.77
LDH1	YBR204C	YIL169C	P40442	995 aa		4.02	□□□□□ -1.77
LDH1	YBR204C	TES1	P41903	349 aa	Known RBP	4.02	□□□□□ -1.77
LDH1	YBR204C	ALK1	P43633	760 aa	Known RBP	4.02	□□□□□ -1.77
LDH1	YBR204C	AIM22	P47051	409 aa		4.02	□□□□□ -1.77
LDH1	YBR204C	TWF1	P53250	332 aa		4.02	□□□□□ -1.77
LDH1	YBR204C	RHO4	Q00246	291 aa		4.02	□□□□□ -1.77
LDH1	YBR204C	SHR3	Q02774	210 aa		4.02	□□□□□ -1.77
LDH1	YBR204C	DIG1	Q03063	452 aa	Known RBP	4.02	□□□□□ -1.77
LDH1	YBR204C	YDR239C	Q03780	787 aa		4.02	□□□□□ -1.77
LDH1	YBR204C	YLR287C	Q05881	355 aa		4.02	□□□□□ -1.77
LDH1	YBR204C	YLR352W	Q06479	807 aa		4.02	□□□□□ -1.77
LDH1	YBR204C	YOR365C	Q08844	703 aa		4.02	□□□□□ -1.77
LDH1	YBR204C	RIM20	Q12033	661 aa		4.02	□□□□□ -1.77
LDH1	YBR204C	ATG29	Q12092	213 aa		4.02	□□□□□ -1.77
LDH1	YBR204C	SEC39	Q12745	709 aa		4.02	□□□□□ -1.77
LDH1	YBR204C	HSH49	Q99181	213 aa	Predicted RBP	4.02	□□□□□ -1.77
LDH1	YBR204C	PMS1	P14242	873 aa		4.01	□□□□□ -1.77
LDH1	YBR204C	HNM1	P19807	563 aa		4.01	□□□□□ -1.77
LDH1	YBR204C	TYR1	P20049	452 aa		4.01	□□□□□ -1.77
LDH1	YBR204C	SGV1	P23293	657 aa	Known RBP	4.01	□□□□□ -1.77
LDH1	YBR204C	PAP1	P29468	568 aa	Known RBP	4.01	□□□□□ -1.77
LDH1	YBR204C	GPI10	P30777	616 aa		4.01	□□□□□ -1.77
LDH1	YBR204C	ERG3	P32353	365 aa		4.01	□□□□□ -1.77
LDH1	YBR204C	RAD24	P32641	659 aa		4.01	□□□□□ -1.77
LDH1	YBR204C	NPL6	P32832	435 aa		4.01	□□□□□ -1.77
LDH1	YBR204C	MIC60	P36112	540 aa		4.01	□□□□□ -1.77
LDH1	YBR204C	YAT2	P40017	923 aa		4.01	□□□□□ -1.77
LDH1	YBR204C	AXL1	P40851	1208 aa		4.01	□□□□□ -1.77
LDH1	YBR204C	YJR154W	P47181	346 aa		4.01	□□□□□ -1.77
LDH1	YBR204C	DRN1	P53255	507 aa	Known RBP	4.01	□□□□□ -1.77
LDH1	YBR204C	BUD32	P53323	261 aa		4.01	□□□□□ -1.77
LDH1	YBR204C	DIC1	Q06143	298 aa		4.01	□□□□□ -1.77
LDH1	YBR204C	RTN2	Q12443	393 aa		4.01	□□□□□ -1.77
LDH1	YBR204C	PGA3	Q12746	312 aa	Known RBP	4.01	□□□□□ -1.77
LDH1	YBR204C	PRP2	P20095	876 aa	Predicted RBP	4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms