RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeast

Gene CKS1, Length 453 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CKS1	YBR135W	GAC1	P28006	793 aa		4.95	□□□□□ -1.62
CKS1	YBR135W	NFU1	P32860	256 aa		4.95	□□□□□ -1.62
CKS1	YBR135W	UBP11	P36026	717 aa		4.95	□□□□□ -1.62
CKS1	YBR135W	TCD2	P36101	447 aa	Known RBP	4.95	□□□□□ -1.62
CKS1	YBR135W	DBP8	P38719	431 aa		4.95	□□□□□ -1.62
CKS1	YBR135W	ULP2	P40537	1034 aa	Predicted RBP	4.95	□□□□□ -1.62
CKS1	YBR135W	HOS2	P53096	452 aa	Predicted RBP	4.95	□□□□□ -1.62
CKS1	YBR135W	ERG26	P53199	349 aa	Known RBP	4.95	□□□□□ -1.62
CKS1	YBR135W	BOP3	P53958	396 aa		4.95	□□□□□ -1.62
CKS1	YBR135W	VTC3	Q02725	835 aa		4.95	□□□□□ -1.62
CKS1	YBR135W	RIM13	Q03792	727 aa		4.95	□□□□□ -1.62
CKS1	YBR135W	CAC2	Q04199	468 aa		4.95	□□□□□ -1.62
CKS1	YBR135W	RPC11	Q04307	110 aa	Predicted RBP	4.95	□□□□□ -1.62
CKS1	YBR135W	EMI2	Q04409	500 aa	Known RBP	4.95	□□□□□ -1.62
CKS1	YBR135W	ADE13	Q05911	482 aa	Known RBP	4.95	□□□□□ -1.62
CKS1	YBR135W	TEN1	Q07921	160 aa		4.95	□□□□□ -1.62
CKS1	YBR135W	RRG1	Q12167	365 aa	Predicted RBP	4.95	□□□□□ -1.62
CKS1	YBR135W	CRC1	Q12289	327 aa		4.95	□□□□□ -1.62
CKS1	YBR135W	RTN2	Q12443	393 aa		4.95	□□□□□ -1.62
CKS1	YBR135W	MRP13	P12686	339 aa		4.94	□□□□□ -1.62
CKS1	YBR135W	BOS1	P25385	244 aa		4.94	□□□□□ -1.62
CKS1	YBR135W	RFC1	P38630	861 aa	Known RBP	4.94	□□□□□ -1.62
CKS1	YBR135W	TOM71	P38825	639 aa	Known RBP	4.94	□□□□□ -1.62
CKS1	YBR135W	ANS1	P38832	159 aa		4.94	□□□□□ -1.62
CKS1	YBR135W	ALG5	P40350	334 aa		4.94	□□□□□ -1.62
CKS1	YBR135W	DOT5	P40553	215 aa		4.94	□□□□□ -1.62
CKS1	YBR135W	CFD1	P40558	293 aa		4.94	□□□□□ -1.62
CKS1	YBR135W	IMD4	P50094	524 aa	Known RBP	4.94	□□□□□ -1.62
CKS1	YBR135W	ATG26	Q06321	1198 aa		4.94	□□□□□ -1.62
CKS1	YBR135W	RPS10A	Q08745	105 aa	Predicted RBP	4.94	□□□□□ -1.62
CKS1	YBR135W	RLM1	Q12224	676 aa		4.94	□□□□□ -1.62
CKS1	YBR135W	SFI1	Q12369	946 aa		4.94	□□□□□ -1.62
CKS1	YBR135W	USO1	P25386	1790 aa		4.93	□□□□□ -1.62
CKS1	YBR135W	NUP188	P52593	1655 aa	Known RBP	4.93	□□□□□ -1.62
CKS1	YBR135W	GAL80	P04387	435 aa		4.93	□□□□□ -1.62
CKS1	YBR135W	BUD5	P25300	642 aa	Predicted RBP	4.93	□□□□□ -1.62
CKS1	YBR135W	PRD1	P25375	712 aa		4.93	□□□□□ -1.62
CKS1	YBR135W	WBP1	P33767	430 aa	Known RBP	4.93	□□□□□ -1.62
CKS1	YBR135W	LSM5	P40089	93 aa	Known RBP	4.93	□□□□□ -1.62
CKS1	YBR135W	PTR3	P43606	678 aa		4.93	□□□□□ -1.62
CKS1	YBR135W	RPS10B	P46784	105 aa	Known RBP	4.93	□□□□□ -1.62
CKS1	YBR135W	PET130	P47065	347 aa		4.93	□□□□□ -1.62
CKS1	YBR135W	IPI3	P53877	555 aa		4.93	□□□□□ -1.62
CKS1	YBR135W	MSC1	Q03104	513 aa		4.93	□□□□□ -1.62
CKS1	YBR135W	FIN1	Q03898	291 aa		4.93	□□□□□ -1.62
CKS1	YBR135W	IML1	P47170	1584 aa		4.92	□□□□□ -1.62
CKS1	YBR135W	ARG81	P05085	880 aa		4.92	□□□□□ -1.62
CKS1	YBR135W	PUT2	P07275	575 aa		4.92	□□□□□ -1.62
CKS1	YBR135W	PDA1	P16387	420 aa	Known RBP	4.92	□□□□□ -1.62
CKS1	YBR135W	ART10	P18634	518 aa	Known RBP	4.92	□□□□□ -1.62
CKS1	YBR135W	YAP1	P19880	650 aa	Known RBP	4.92	□□□□□ -1.62
CKS1	YBR135W	GPI10	P30777	616 aa		4.92	□□□□□ -1.62
CKS1	YBR135W	MRE11	P32829	692 aa		4.92	□□□□□ -1.62
CKS1	YBR135W	YKL100C	P34248	587 aa		4.92	□□□□□ -1.62
CKS1	YBR135W	CST26	P38226	397 aa		4.92	□□□□□ -1.62
CKS1	YBR135W	VID24	P38263	362 aa		4.92	□□□□□ -1.62
CKS1	YBR135W	ICS2	P38284	255 aa		4.92	□□□□□ -1.62
CKS1	YBR135W	SMF1	P38925	575 aa		4.92	□□□□□ -1.62
CKS1	YBR135W	LTP1	P40347	161 aa		4.92	□□□□□ -1.62
CKS1	YBR135W	YIL024C	P40543	189 aa		4.92	□□□□□ -1.62
CKS1	YBR135W	YGR250C	P53316	781 aa	Known RBP	4.92	□□□□□ -1.62
CKS1	YBR135W	YNL144C	P53907	740 aa		4.92	□□□□□ -1.62
CKS1	YBR135W	MRD1	Q06106	887 aa	Known RBP	4.92	□□□□□ -1.62
CKS1	YBR135W	RIM20	Q12033	661 aa		4.92	□□□□□ -1.62
CKS1	YBR135W	HAP1	P0CE41	1502 aa		4.92	□□□□□ -1.62
CKS1	YBR135W	UBA4	P38820	440 aa		4.91	□□□□□ -1.62
CKS1	YBR135W	HXT9	P40885	567 aa		4.91	□□□□□ -1.62
CKS1	YBR135W	PSA1	P41940	361 aa	Known RBP	4.91	□□□□□ -1.62
CKS1	YBR135W	RSM23	Q01163	450 aa		4.91	□□□□□ -1.62
CKS1	YBR135W	ARP10	Q04549	284 aa		4.91	□□□□□ -1.62
CKS1	YBR135W	ECM22	Q05958	814 aa	Predicted RBP	4.91	□□□□□ -1.62
CKS1	YBR135W	MCP2	Q06567	569 aa		4.91	□□□□□ -1.62
CKS1	YBR135W	ECM30	Q06673	1274 aa		4.91	□□□□□ -1.62
CKS1	YBR135W	ATG29	Q12092	213 aa		4.91	□□□□□ -1.62
CKS1	YBR135W	ERP4	Q12450	207 aa		4.91	□□□□□ -1.62
CKS1	YBR135W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.9	□□□□□ -1.62
CKS1	YBR135W	YER190C-B	P0CX94	160 aa		4.9	□□□□□ -1.63
CKS1	YBR135W	YEL077W-A	P0CX95	160 aa		4.9	□□□□□ -1.63
CKS1	YBR135W	YGR296C-B	P0CX96	160 aa		4.9	□□□□□ -1.63
CKS1	YBR135W	YPL283W-B	P0CX97	160 aa		4.9	□□□□□ -1.63
CKS1	YBR135W	YPR204C-A	P0CX98	160 aa		4.9	□□□□□ -1.63
CKS1	YBR135W	MTR2	P34232	184 aa	Known RBP	4.9	□□□□□ -1.63
CKS1	YBR135W	BYE1	P36106	594 aa		4.9	□□□□□ -1.63
CKS1	YBR135W	RPL32	P38061	130 aa	Known RBP	4.9	□□□□□ -1.63
CKS1	YBR135W	MUM2	P38236	366 aa		4.9	□□□□□ -1.63
CKS1	YBR135W	LEU5	P38702	357 aa		4.9	□□□□□ -1.63
CKS1	YBR135W	CIN4	P39110	191 aa		4.9	□□□□□ -1.63
CKS1	YBR135W	YIL060W	P40519	144 aa		4.9	□□□□□ -1.63
CKS1	YBR135W	YPT11	P48559	417 aa		4.9	□□□□□ -1.63
CKS1	YBR135W	PYK2	P52489	506 aa	Known RBP	4.9	□□□□□ -1.63
CKS1	YBR135W	SGF73	P53165	657 aa		4.9	□□□□□ -1.63
CKS1	YBR135W	LGE1	Q02796	332 aa	Known RBP	4.9	□□□□□ -1.63
CKS1	YBR135W	YDR239C	Q03780	787 aa		4.9	□□□□□ -1.63
CKS1	YBR135W	YMR155W	Q03795	547 aa		4.9	□□□□□ -1.63
CKS1	YBR135W	SEC39	Q12745	709 aa		4.9	□□□□□ -1.63
CKS1	YBR135W	PHO90	P39535	881 aa		4.89	□□□□□ -1.63
CKS1	YBR135W	XBP1	P40489	647 aa		4.89	□□□□□ -1.63
CKS1	YBR135W	AXL1	P40851	1208 aa		4.89	□□□□□ -1.63
CKS1	YBR135W	GPD2	P41911	440 aa	Known RBP	4.89	□□□□□ -1.63
CKS1	YBR135W	BNA3	P47039	444 aa	Known RBP	4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms