RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W IMA3P0CW40 589 aa2.25□□□□□ -2.05
NUP170YBL079W IMA4P0CW41 589 aa2.25□□□□□ -2.05
NUP170YBL079W GLN4P13188 809 aaKnown RBP2.25□□□□□ -2.05
NUP170YBL079W MRPL25P23369 157 aa2.25□□□□□ -2.05
NUP170YBL079W TRK2P28584 889 aa2.25□□□□□ -2.05
NUP170YBL079W HEM3P28789 327 aa2.25□□□□□ -2.05
NUP170YBL079W URA10P30402 227 aa2.25□□□□□ -2.05
NUP170YBL079W DOA1P36037 715 aa2.25□□□□□ -2.05
NUP170YBL079W YMR124WP39523 943 aaKnown RBP2.25□□□□□ -2.05
NUP170YBL079W OAF1P39720 1047 aaPredicted RBP2.25□□□□□ -2.05
NUP170YBL079W SAW1P39735 261 aa2.25□□□□□ -2.05
NUP170YBL079W YEL073CP39974 107 aa2.25□□□□□ -2.05
NUP170YBL079W YFR020WP43600 232 aa2.25□□□□□ -2.05
NUP170YBL079W PUS2P53167 370 aa2.25□□□□□ -2.05
NUP170YBL079W RPL15BP54780 204 aaPredicted RBP2.25□□□□□ -2.05
NUP170YBL079W YLR446WQ06204 433 aa2.25□□□□□ -2.05
NUP170YBL079W TAZ1Q06510 381 aa2.25□□□□□ -2.05
NUP170YBL079W IMA2Q08295 589 aa2.25□□□□□ -2.05
NUP170YBL079W HRK1Q08732 759 aaKnown RBP2.25□□□□□ -2.05
NUP170YBL079W YOR342CQ12182 319 aa2.25□□□□□ -2.05
NUP170YBL079W TPO4Q12256 659 aa2.25□□□□□ -2.05
NUP170YBL079W MHF1Q3E835 90 aa2.25□□□□□ -2.05
NUP170YBL079W STE12P13574 688 aa2.24□□□□□ -2.05
NUP170YBL079W ACO1P19414 778 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
NUP170YBL079W GAL11P19659 1081 aa2.24□□□□□ -2.05
NUP170YBL079W RVS161P25343 265 aaKnown RBP2.24□□□□□ -2.05
NUP170YBL079W MFT1P33441 392 aaKnown RBP2.24□□□□□ -2.05
NUP170YBL079W BET3P36149 193 aa2.24□□□□□ -2.05
NUP170YBL079W PCL5P38794 229 aa2.24□□□□□ -2.05
NUP170YBL079W SKN7P38889 622 aa2.24□□□□□ -2.05
NUP170YBL079W TIM17P39515 158 aa2.24□□□□□ -2.05
NUP170YBL079W YER130CP39959 443 aa2.24□□□□□ -2.05
NUP170YBL079W NMD5P46970 1048 aa2.24□□□□□ -2.05
NUP170YBL079W MDV1P47025 714 aa2.24□□□□□ -2.05
NUP170YBL079W YJR030CP47101 745 aa2.24□□□□□ -2.05
NUP170YBL079W CSN12P47130 423 aa2.24□□□□□ -2.05
NUP170YBL079W MON1P53129 644 aa2.24□□□□□ -2.05
NUP170YBL079W SNO2P53823 222 aa2.24□□□□□ -2.05
NUP170YBL079W PET191Q02772 108 aa2.24□□□□□ -2.05
NUP170YBL079W VPS38Q05919 439 aa2.24□□□□□ -2.05
NUP170YBL079W GUP2Q08929 609 aa2.24□□□□□ -2.05
NUP170YBL079W PRP2P20095 876 aaPredicted RBP2.24□□□□□ -2.05
NUP170YBL079W SFL1P20134 766 aa2.24□□□□□ -2.05
NUP170YBL079W CLN1P20437 546 aa2.24□□□□□ -2.05
NUP170YBL079W YIM1P28625 365 aa2.24□□□□□ -2.05
NUP170YBL079W RPN12P32496 274 aa2.24□□□□□ -2.05
NUP170YBL079W GYP6P32806 458 aa2.24□□□□□ -2.05
NUP170YBL079W LOT5P34234 306 aa2.24□□□□□ -2.05
NUP170YBL079W RRP1P35178 278 aaPredicted RBP2.24□□□□□ -2.05
NUP170YBL079W YOR062CP36025 268 aa2.24□□□□□ -2.05
NUP170YBL079W SNU114P36048 1008 aaKnown RBP2.24□□□□□ -2.05
NUP170YBL079W MCX1P38323 520 aaPredicted RBP2.24□□□□□ -2.05
NUP170YBL079W YHR127WP38833 243 aaKnown RBP2.24□□□□□ -2.05
NUP170YBL079W FAD1P38913 306 aa2.24□□□□□ -2.05
NUP170YBL079W YER189WP40104 122 aa2.24□□□□□ -2.05
NUP170YBL079W YJL068CP40363 299 aa2.24□□□□□ -2.05
NUP170YBL079W SNG1P46950 547 aa2.24□□□□□ -2.05
NUP170YBL079W ARE2P53629 642 aaKnown RBP2.24□□□□□ -2.05
NUP170YBL079W TRM112P53738 135 aaPredicted RBP2.24□□□□□ -2.05
NUP170YBL079W USA1Q03714 838 aa2.24□□□□□ -2.05
NUP170YBL079W ECM11Q04110 302 aa2.24□□□□□ -2.05
NUP170YBL079W NHX1Q04121 633 aa2.24□□□□□ -2.05
NUP170YBL079W RRP45Q05636 305 aaKnown RBP2.24□□□□□ -2.05
NUP170YBL079W RSA3Q05942 220 aaKnown RBP2.24□□□□□ -2.05
NUP170YBL079W TDA5Q06417 326 aaKnown RBP2.24□□□□□ -2.05
NUP170YBL079W CBC2Q08920 208 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
NUP170YBL079W OXP1P28273 1286 aa2.24□□□□□ -2.05
NUP170YBL079W SKN1P33336 771 aa2.24□□□□□ -2.05
NUP170YBL079W TMN3P40071 706 aa2.24□□□□□ -2.05
NUP170YBL079W VNX1P42839 908 aa2.24□□□□□ -2.05
NUP170YBL079W PMT4P46971 762 aa2.24□□□□□ -2.05
NUP170YBL079W YMR1P47147 688 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
NUP170YBL079W COS12P53053 380 aa2.24□□□□□ -2.05
NUP170YBL079W IST1P53843 298 aaPredicted RBP2.24□□□□□ -2.05
NUP170YBL079W UBX4P54730 416 aa2.24□□□□□ -2.05
NUP170YBL079W OSH6Q02201 448 aa2.24□□□□□ -2.05
NUP170YBL079W YMR034CQ05131 434 aaPredicted RBP2.24□□□□□ -2.05
NUP170YBL079W VAC14Q06708 880 aa2.24□□□□□ -2.05
NUP170YBL079W PML1Q07930 204 aaPredicted RBP2.24□□□□□ -2.05
NUP170YBL079W YDR056CQ12025 205 aa2.24□□□□□ -2.05
NUP170YBL079W RKM5Q12367 367 aa2.24□□□□□ -2.05
NUP170YBL079W YCL012CQ8J0M4 134 aa2.24□□□□□ -2.05
NUP170YBL079W GPA1P08539 472 aa2.23□□□□□ -2.05
NUP170YBL079W STE6P12866 1290 aa2.23□□□□□ -2.05
NUP170YBL079W SEC63P14906 663 aa2.23□□□□□ -2.05
NUP170YBL079W TYR1P20049 452 aa2.23□□□□□ -2.05
NUP170YBL079W ADE1P27616 306 aa2.23□□□□□ -2.05
NUP170YBL079W ASF2P32448 525 aaPredicted RBP2.23□□□□□ -2.05
NUP170YBL079W YBR139WP38109 508 aa2.23□□□□□ -2.05
NUP170YBL079W HSE1P38753 452 aa2.23□□□□□ -2.05
NUP170YBL079W PLB1P39105 664 aa2.23□□□□□ -2.05
NUP170YBL079W SSP120P39931 234 aaKnown RBP2.23□□□□□ -2.05
NUP170YBL079W PRK1P40494 810 aa2.23□□□□□ -2.05
NUP170YBL079W ZIM17P42844 174 aa2.23□□□□□ -2.05
NUP170YBL079W MIC19P43594 170 aa2.23□□□□□ -2.05
NUP170YBL079W IKS1P47042 667 aa2.23□□□□□ -2.05
NUP170YBL079W VEL1P53058 206 aa2.23□□□□□ -2.05
NUP170YBL079W MTO1P53070 669 aa2.23□□□□□ -2.05
NUP170YBL079W YGR079WP53249 370 aa2.23□□□□□ -2.05
NUP170YBL079W LSC1P53598 329 aaKnown RBP2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms